Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm25943-201ENSMUST00000103791 90 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm23203-201ENSMUST00000104374 107 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Mir1298-201ENSMUST00000116681 98 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm25544-201ENSMUST00000122676 120 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm23853-201ENSMUST00000158375 104 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm26403-201ENSMUST00000158500 105 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm25285-201ENSMUST00000178951 90 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm27587-201ENSMUST00000185116 163 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.84□□□□□ -2.27
Khdc3Q9CWU5 Gm22332-201ENSMUST00000158072 126 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Gm24728-201ENSMUST00000158226 125 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Gm24678-201ENSMUST00000158756 104 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Mir3968-201ENSMUST00000175355 100 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Gm42795-201ENSMUST00000198847 76 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Gm5002-201ENSMUST00000207145 223 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Mir196b-201ENSMUST00000083509 85 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Mir27b-201ENSMUST00000083541 73 ntBASIC0.83□□□□□ -2.28
Khdc3Q9CWU5 Gm25610-201ENSMUST00000104016 129 ntBASIC0.82□□□□□ -2.28
Khdc3Q9CWU5 Gm22606-201ENSMUST00000158290 103 ntBASIC0.82□□□□□ -2.28
Khdc3Q9CWU5 Gm22348-201ENSMUST00000178674 79 ntBASIC0.82□□□□□ -2.28
Khdc3Q9CWU5 Gm26097-201ENSMUST00000179642 93 ntBASIC0.82□□□□□ -2.28
Khdc3Q9CWU5 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.82□□□□□ -2.28
Khdc3Q9CWU5 Gm14502-201ENSMUST00000118154 113 ntBASIC0.81□□□□□ -2.28
Khdc3Q9CWU5 Gm6272-201ENSMUST00000121256 171 ntBASIC0.81□□□□□ -2.28
Khdc3Q9CWU5 Gm25715-201ENSMUST00000158627 125 ntBASIC0.81□□□□□ -2.28
Khdc3Q9CWU5 Mir7052-201ENSMUST00000184821 65 ntBASIC0.81□□□□□ -2.28
Khdc3Q9CWU5 Gm28767-201ENSMUST00000188601 114 ntBASIC0.81□□□□□ -2.28
Khdc3Q9CWU5 Gm42623-201ENSMUST00000197225 379 ntBASIC0.81□□□□□ -2.28
Khdc3Q9CWU5 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.81□□□□□ -2.28
Khdc3Q9CWU5 Gm22689-201ENSMUST00000102452 110 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Gm14039-201ENSMUST00000118705 101 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Gm22466-201ENSMUST00000175278 69 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Mir1954-201ENSMUST00000175595 86 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Mir7663-201ENSMUST00000183950 61 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Gm18665-201ENSMUST00000189783 270 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Gm24624-201ENSMUST00000082617 164 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Gm25814-201ENSMUST00000082754 107 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Snord47-201ENSMUST00000083034 77 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Mir410-201ENSMUST00000083563 81 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Snord33-201ENSMUST00000083694 84 ntBASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.8□□□□□ -2.28
Khdc3Q9CWU5 Gm23859-201ENSMUST00000158383 64 ntBASIC0.79□□□□□ -2.28
Khdc3Q9CWU5 Gm23864-201ENSMUST00000177607 107 ntBASIC0.79□□□□□ -2.28
Khdc3Q9CWU5 Gm27446-201ENSMUST00000183963 89 ntBASIC0.79□□□□□ -2.28
Khdc3Q9CWU5 Gm28435-201ENSMUST00000185496 108 ntBASIC0.79□□□□□ -2.28
Khdc3Q9CWU5 Gm44807-201ENSMUST00000206115 154 ntBASIC0.79□□□□□ -2.28
Khdc3Q9CWU5 Gm22786-201ENSMUST00000104086 122 ntBASIC0.78□□□□□ -2.28
Khdc3Q9CWU5 Gm25378-201ENSMUST00000104333 129 ntBASIC0.78□□□□□ -2.28
Khdc3Q9CWU5 Gm24549-201ENSMUST00000158647 139 ntBASIC0.78□□□□□ -2.28
Khdc3Q9CWU5 Gm26301-201ENSMUST00000104813 95 ntBASIC0.77□□□□□ -2.29
Khdc3Q9CWU5 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.77□□□□□ -2.29
Khdc3Q9CWU5 Gm15654-201ENSMUST00000152660 300 ntBASIC0.77□□□□□ -2.29
Khdc3Q9CWU5 Gm22796-201ENSMUST00000157234 106 ntBASIC0.77□□□□□ -2.29
Khdc3Q9CWU5 Gm44488-201ENSMUST00000199467 119 ntBASIC0.77□□□□□ -2.29
Khdc3Q9CWU5 Gm25138-201ENSMUST00000083248 136 ntBASIC0.77□□□□□ -2.29
Khdc3Q9CWU5 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Snord69-201ENSMUST00000104024 80 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Gm25506-201ENSMUST00000104339 70 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Gm22967-201ENSMUST00000157956 239 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Gm25444-201ENSMUST00000158999 113 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Gm20386-201ENSMUST00000174010 132 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Gm23416-201ENSMUST00000175520 95 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Mir6390-201ENSMUST00000184405 129 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Gm26225-201ENSMUST00000082508 135 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Snord61-201ENSMUST00000083176 71 ntBASIC0.76□□□□□ -2.29
Khdc3Q9CWU5 Gm23766-201ENSMUST00000103894 80 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Gm14626-201ENSMUST00000117619 216 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Gm24476-201ENSMUST00000157437 131 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Mir21b-201ENSMUST00000184317 108 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Mir7116-201ENSMUST00000195956 70 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Mir30f-201ENSMUST00000196073 92 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Mir3969-201ENSMUST00000197106 92 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Gm44211-201ENSMUST00000204867 145 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 AL929417.1-201ENSMUST00000214901 124 ntBASIC0.75□□□□□ -2.29
Khdc3Q9CWU5 Gm25316-201ENSMUST00000116826 118 ntBASIC0.74□□□□□ -2.29
Khdc3Q9CWU5 Gm12432-201ENSMUST00000119540 186 ntBASIC0.74□□□□□ -2.29
Khdc3Q9CWU5 Gm24747-201ENSMUST00000157835 87 ntBASIC0.74□□□□□ -2.29
Khdc3Q9CWU5 Gm20409-201ENSMUST00000173457 130 ntBASIC0.74□□□□□ -2.29
Khdc3Q9CWU5 Gm22973-201ENSMUST00000083298 191 ntBASIC0.74□□□□□ -2.29
Khdc3Q9CWU5 Gm22105-201ENSMUST00000116734 116 ntBASIC0.73□□□□□ -2.29
Khdc3Q9CWU5 Gm14946-201ENSMUST00000119859 296 ntBASIC0.73□□□□□ -2.29
Khdc3Q9CWU5 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.73□□□□□ -2.29
Khdc3Q9CWU5 Gm23209-201ENSMUST00000158667 110 ntBASIC0.73□□□□□ -2.29
Khdc3Q9CWU5 Mir1966-201ENSMUST00000158807 108 ntBASIC0.73□□□□□ -2.29
Khdc3Q9CWU5 Gm36956-201ENSMUST00000193830 214 ntBASIC0.73□□□□□ -2.29
Khdc3Q9CWU5 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 157.3 ms