Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm26478-201ENSMUST00000122611 133 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 Gm22205-201ENSMUST00000122655 71 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 Gm24064-201ENSMUST00000157486 106 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 Gm24495-201ENSMUST00000178575 79 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 Gm22253-201ENSMUST00000179870 79 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 Gm25788-201ENSMUST00000082721 131 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 Gm26123-201ENSMUST00000083363 135 ntBASIC2.53□□□□□ -2
Trim11Q99PQ2 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim11Q99PQ2 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim11Q99PQ2 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Gm25241-201ENSMUST00000174909 84 ntBASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Gm26217-201ENSMUST00000175212 84 ntBASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Gm27369-201ENSMUST00000185182 71 ntBASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Gm23370-201ENSMUST00000199545 130 ntBASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Gm23299-201ENSMUST00000082708 79 ntBASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Mir410-201ENSMUST00000083563 81 ntBASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Gm23344-201ENSMUST00000083818 68 ntBASIC2.52□□□□□ -2.01
Trim11Q99PQ2 Gm11856-201ENSMUST00000118712 276 ntBASIC2.51□□□□□ -2.01
Trim11Q99PQ2 Gm16328-201ENSMUST00000126985 196 ntBASIC2.51□□□□□ -2.01
Trim11Q99PQ2 Gm16550-201ENSMUST00000162550 126 ntBASIC2.51□□□□□ -2.01
Trim11Q99PQ2 Mir3075-201ENSMUST00000175340 85 ntBASIC2.51□□□□□ -2.01
Trim11Q99PQ2 Mir6379-201ENSMUST00000183392 115 ntBASIC2.51□□□□□ -2.01
Trim11Q99PQ2 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.51□□□□□ -2.01
Trim11Q99PQ2 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.51□□□□□ -2.01
Trim11Q99PQ2 Gm26154-201ENSMUST00000102339 96 ntBASIC2.5□□□□□ -2.01
Trim11Q99PQ2 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.5□□□□□ -2.01
Trim11Q99PQ2 Gm22093-201ENSMUST00000158980 111 ntBASIC2.5□□□□□ -2.01
Trim11Q99PQ2 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim11Q99PQ2 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Trim11Q99PQ2 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Trim11Q99PQ2 Gm25417-201ENSMUST00000104212 131 ntBASIC2.49□□□□□ -2.01
Trim11Q99PQ2 Gm22048-201ENSMUST00000104721 89 ntBASIC2.49□□□□□ -2.01
Trim11Q99PQ2 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.49□□□□□ -2.01
Trim11Q99PQ2 Gm25618-201ENSMUST00000179484 107 ntBASIC2.49□□□□□ -2.01
Trim11Q99PQ2 Mir7217-201ENSMUST00000200304 62 ntBASIC2.49□□□□□ -2.01
Trim11Q99PQ2 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.49□□□□□ -2.01
Trim11Q99PQ2 Mir127-201ENSMUST00000093568 70 ntBASIC2.49□□□□□ -2.01
Trim11Q99PQ2 Mir764-201ENSMUST00000103259 108 ntBASIC2.48□□□□□ -2.01
Trim11Q99PQ2 Mir1197-201ENSMUST00000117037 120 ntBASIC2.48□□□□□ -2.01
Trim11Q99PQ2 Gm12941-201ENSMUST00000117934 220 ntBASIC2.48□□□□□ -2.01
Trim11Q99PQ2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.48□□□□□ -2.01
Trim11Q99PQ2 Gm22425-201ENSMUST00000158532 138 ntBASIC2.48□□□□□ -2.01
Trim11Q99PQ2 Gm24880-201ENSMUST00000158776 85 ntBASIC2.48□□□□□ -2.01
Trim11Q99PQ2 Gm24333-201ENSMUST00000175101 84 ntBASIC2.48□□□□□ -2.01
Trim11Q99PQ2 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trim11Q99PQ2 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Gm23528-201ENSMUST00000104571 132 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Gm23996-201ENSMUST00000158062 131 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Gm26214-201ENSMUST00000158581 107 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Gm25368-201ENSMUST00000158847 131 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Gm24918-201ENSMUST00000083022 130 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Mir300-201ENSMUST00000083485 79 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Mir429-201ENSMUST00000083493 83 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.47□□□□□ -2.01
Trim11Q99PQ2 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.01
Trim11Q99PQ2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Trim11Q99PQ2 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Gm24274-201ENSMUST00000116787 124 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Gm24183-201ENSMUST00000122572 93 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Gm15654-201ENSMUST00000152660 300 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Gm24851-201ENSMUST00000158028 103 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Gm24044-201ENSMUST00000083107 156 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Mir5117-201ENSMUST00000083226 84 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Gm24162-201ENSMUST00000093665 102 ntBASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Trim11Q99PQ2 Gm24988-201ENSMUST00000104460 121 ntBASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm20305-201ENSMUST00000193226 177 ntBASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm44462-201ENSMUST00000199696 129 ntBASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm23376-201ENSMUST00000082938 160 ntBASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm25402-201ENSMUST00000082966 131 ntBASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm25705-201ENSMUST00000083119 104 ntBASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm24412-201ENSMUST00000083426 109 ntBASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm24698-201ENSMUST00000083883 130 ntBASIC2.45□□□□□ -2.02
Trim11Q99PQ2 Gm11598-201ENSMUST00000119257 357 ntBASIC2.44□□□□□ -2.02
Trim11Q99PQ2 Gm22500-201ENSMUST00000158982 99 ntBASIC2.44□□□□□ -2.02
Trim11Q99PQ2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.44□□□□□ -2.02
Trim11Q99PQ2 Gm23375-201ENSMUST00000175407 83 ntBASIC2.44□□□□□ -2.02
Trim11Q99PQ2 Gm26398-201ENSMUST00000179015 127 ntBASIC2.44□□□□□ -2.02
Trim11Q99PQ2 Mir6388-201ENSMUST00000184417 75 ntBASIC2.44□□□□□ -2.02
Trim11Q99PQ2 Gm26062-201ENSMUST00000083379 107 ntBASIC2.44□□□□□ -2.02
Trim11Q99PQ2 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm24199-201ENSMUST00000157808 136 ntBASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm22732-201ENSMUST00000158093 121 ntBASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm25011-201ENSMUST00000158398 126 ntBASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm26213-201ENSMUST00000158582 110 ntBASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms