Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm22626-201ENSMUST00000116990 126 ntBASIC-2.91□□□□□ -2.87
Cdh23Q99PF4 Gm11204-201ENSMUST00000122438 147 ntBASIC-2.91□□□□□ -2.87
Cdh23Q99PF4 Gm16550-201ENSMUST00000162550 126 ntBASIC-2.91□□□□□ -2.88
Cdh23Q99PF4 Gm14931-201ENSMUST00000111079 253 ntBASIC-2.92□□□□□ -2.88
Cdh23Q99PF4 Gm44324-201ENSMUST00000198517 135 ntBASIC-2.92□□□□□ -2.88
Cdh23Q99PF4 Gm26076-201ENSMUST00000104065 105 ntBASIC-2.92□□□□□ -2.88
Cdh23Q99PF4 Gm13720-201ENSMUST00000120741 196 ntBASIC-2.92□□□□□ -2.88
Cdh23Q99PF4 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC-2.92□□□□□ -2.88
Cdh23Q99PF4 Gm42805-201ENSMUST00000196158 276 ntBASIC-2.93□□□□□ -2.88
Cdh23Q99PF4 AC155712.1-201ENSMUST00000219704 160 ntBASIC-2.94□□□□□ -2.88
Cdh23Q99PF4 Gm25109-201ENSMUST00000122474 114 ntBASIC-2.94□□□□□ -2.88
Cdh23Q99PF4 AL645546.2-201ENSMUST00000224526 265 ntBASIC-2.94□□□□□ -2.88
Cdh23Q99PF4 Gm22974-201ENSMUST00000083301 103 ntBASIC-2.94□□□□□ -2.88
Cdh23Q99PF4 Gm23655-201ENSMUST00000122627 105 ntBASIC-2.94□□□□□ -2.88
Cdh23Q99PF4 Gm24250-201ENSMUST00000157320 135 ntBASIC-2.95□□□□□ -2.88
Cdh23Q99PF4 Gm26228-201ENSMUST00000082512 107 ntBASIC-2.95□□□□□ -2.88
Cdh23Q99PF4 Gm25825-201ENSMUST00000157091 124 ntBASIC-2.95□□□□□ -2.88
Cdh23Q99PF4 AC124569.4-201ENSMUST00000223830 1220 ntBASIC-2.95□□□□□ -2.88
Cdh23Q99PF4 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC-2.96□□□□□ -2.88
Cdh23Q99PF4 Gm15899-201ENSMUST00000128586 238 ntBASIC-2.96□□□□□ -2.88
Cdh23Q99PF4 Gm42164-201ENSMUST00000198881 379 ntBASIC-2.96□□□□□ -2.88
Cdh23Q99PF4 Mir669h-201ENSMUST00000116944 125 ntBASIC-2.97□□□□□ -2.88
Cdh23Q99PF4 Gm25056-201ENSMUST00000157372 62 ntBASIC-2.97□□□□□ -2.88
Cdh23Q99PF4 Gm26084-201ENSMUST00000157903 104 ntBASIC-2.97□□□□□ -2.88
Cdh23Q99PF4 Gm22071-201ENSMUST00000116857 83 ntBASIC-2.97□□□□□ -2.89
Cdh23Q99PF4 Gm44135-201ENSMUST00000205221 368 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Trav5-2-201ENSMUST00000199855 280 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm23845-201ENSMUST00000083834 152 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm25629-201ENSMUST00000084001 107 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm11834-201ENSMUST00000122257 585 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm24877-201ENSMUST00000158779 116 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Mir6382-201ENSMUST00000184055 110 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm31849-201ENSMUST00000220306 375 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm22287-201ENSMUST00000083197 107 ntBASIC-2.98□□□□□ -2.89
Cdh23Q99PF4 Gm23291-201ENSMUST00000175611 78 ntBASIC-2.99□□□□□ -2.89
Cdh23Q99PF4 Gm27672-201ENSMUST00000183751 204 ntBASIC-2.99□□□□□ -2.89
Cdh23Q99PF4 Gm23404-201ENSMUST00000082543 97 ntBASIC-2.99□□□□□ -2.89
Cdh23Q99PF4 AC173345.2-201ENSMUST00000222795 153 ntBASIC-2.99□□□□□ -2.89
Cdh23Q99PF4 AC183092.1-201ENSMUST00000224301 153 ntBASIC-2.99□□□□□ -2.89
Cdh23Q99PF4 AC147633.1-201ENSMUST00000225134 259 ntBASIC-2.99□□□□□ -2.89
Cdh23Q99PF4 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-3□□□□□ -2.89
Cdh23Q99PF4 Gm24100-201ENSMUST00000178592 79 ntBASIC-3□□□□□ -2.89
Cdh23Q99PF4 n-R5s183-201ENSMUST00000083939 115 ntBASIC-3□□□□□ -2.89
Cdh23Q99PF4 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-3□□□□□ -2.89
Cdh23Q99PF4 Gm25097-201ENSMUST00000104042 145 ntBASIC-3□□□□□ -2.89
Cdh23Q99PF4 Gm11694-201ENSMUST00000118637 159 ntBASIC-3□□□□□ -2.89
Cdh23Q99PF4 Gm13922-201ENSMUST00000119505 156 ntBASIC-3□□□□□ -2.89
Cdh23Q99PF4 Gm13560-201ENSMUST00000121865 329 ntBASIC-3□□□□□ -2.89
Cdh23Q99PF4 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3□□□□□ -2.89
Cdh23Q99PF4 AC132104.1-201ENSMUST00000213615 260 ntBASIC-3□□□□□ -2.89
Cdh23Q99PF4 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-3.01□□□□□ -2.89
Cdh23Q99PF4 Gm24988-201ENSMUST00000104460 121 ntBASIC-3.01□□□□□ -2.89
Cdh23Q99PF4 Gm28669-201ENSMUST00000188400 100 ntBASIC-3.01□□□□□ -2.89
Cdh23Q99PF4 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-3.01□□□□□ -2.89
Cdh23Q99PF4 Gm23078-201ENSMUST00000157848 148 ntBASIC-3.01□□□□□ -2.89
Cdh23Q99PF4 Gm22577-201ENSMUST00000083731 109 ntBASIC-3.01□□□□□ -2.89
Cdh23Q99PF4 Gm24223-201ENSMUST00000158827 90 ntBASIC-3.02□□□□□ -2.89
Cdh23Q99PF4 Gm27522-201ENSMUST00000183949 230 ntBASIC-3.02□□□□□ -2.89
Cdh23Q99PF4 Gm22828-201ENSMUST00000083768 107 ntBASIC-3.02□□□□□ -2.89
Cdh23Q99PF4 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-3.02□□□□□ -2.89
Cdh23Q99PF4 Mir6395-201ENSMUST00000183885 91 ntBASIC-3.02□□□□□ -2.89
Cdh23Q99PF4 Gm21940-201ENSMUST00000204940 2278 ntBASIC-3.03□□□□□ -2.89
Cdh23Q99PF4 Gm14883-201ENSMUST00000120179 157 ntBASIC-3.03□□□□□ -2.89
Cdh23Q99PF4 Gm24631-201ENSMUST00000122765 81 ntBASIC-3.03□□□□□ -2.89
Cdh23Q99PF4 Gm22999-201ENSMUST00000157082 88 ntBASIC-3.03□□□□□ -2.89
Cdh23Q99PF4 Gm23039-201ENSMUST00000083870 161 ntBASIC-3.03□□□□□ -2.89
Cdh23Q99PF4 Gm12647-201ENSMUST00000118977 265 ntBASIC-3.03□□□□□ -2.9
Cdh23Q99PF4 Gm23661-201ENSMUST00000122630 87 ntBASIC-3.03□□□□□ -2.9
Cdh23Q99PF4 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-3.03□□□□□ -2.9
Cdh23Q99PF4 Gm23730-201ENSMUST00000083236 107 ntBASIC-3.04□□□□□ -2.9
Cdh23Q99PF4 Gm22212-201ENSMUST00000158096 106 ntBASIC-3.04□□□□□ -2.9
Cdh23Q99PF4 Gm23451-201ENSMUST00000083328 122 ntBASIC-3.04□□□□□ -2.9
Cdh23Q99PF4 Gm24762-201ENSMUST00000083689 104 ntBASIC-3.04□□□□□ -2.9
Cdh23Q99PF4 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Mir669g-201ENSMUST00000116809 123 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm24673-201ENSMUST00000116948 124 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm13345-201ENSMUST00000121928 228 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm24111-201ENSMUST00000175491 97 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm26426-201ENSMUST00000177866 123 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm23108-201ENSMUST00000178295 124 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm26060-201ENSMUST00000180094 123 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm44063-201ENSMUST00000203307 376 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 Gm23607-201ENSMUST00000104550 126 ntBASIC-3.06□□□□□ -2.9
Cdh23Q99PF4 AC129085.1-201ENSMUST00000225263 165 ntBASIC-3.07□□□□□ -2.9
Cdh23Q99PF4 Gm22248-201ENSMUST00000082482 150 ntBASIC-3.08□□□□□ -2.9
Cdh23Q99PF4 Gm24399-201ENSMUST00000157869 74 ntBASIC-3.08□□□□□ -2.9
Cdh23Q99PF4 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-3.08□□□□□ -2.9
Cdh23Q99PF4 Gm23817-201ENSMUST00000158449 104 ntBASIC-3.08□□□□□ -2.9
Cdh23Q99PF4 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC-3.09□□□□□ -2.9
Cdh23Q99PF4 Snord90-201ENSMUST00000104568 111 ntBASIC-3.09□□□□□ -2.9
Cdh23Q99PF4 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC-3.09□□□□□ -2.9
Cdh23Q99PF4 Gm23000-201ENSMUST00000157083 139 ntBASIC-3.1□□□□□ -2.91
Cdh23Q99PF4 Gm23412-201ENSMUST00000083017 107 ntBASIC-3.1□□□□□ -2.91
Cdh23Q99PF4 Gm25793-201ENSMUST00000083287 107 ntBASIC-3.1□□□□□ -2.91
Cdh23Q99PF4 Gm22197-201ENSMUST00000116866 58 ntBASIC-3.1□□□□□ -2.91
Cdh23Q99PF4 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-3.11□□□□□ -2.91
Cdh23Q99PF4 Gm18242-201ENSMUST00000218455 542 ntBASIC-3.11□□□□□ -2.91
Retrieved 100 of 76,532 protein–RNA pairs in 194.3 ms