Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm6897-201ENSMUST00000117714 138 ntBASIC0.18□□□□□ -2.38
Cdk5rap3Q99LM2 Gm14758-201ENSMUST00000119104 138 ntBASIC0.18□□□□□ -2.38
Cdk5rap3Q99LM2 Gm25015-201ENSMUST00000158400 128 ntBASIC0.18□□□□□ -2.38
Cdk5rap3Q99LM2 Gm42795-201ENSMUST00000198847 76 ntBASIC0.18□□□□□ -2.38
Cdk5rap3Q99LM2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Cdk5rap3Q99LM2 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.18□□□□□ -2.38
Cdk5rap3Q99LM2 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.18□□□□□ -2.38
Cdk5rap3Q99LM2 Mir186-201ENSMUST00000083497 71 ntBASIC0.18□□□□□ -2.38
Cdk5rap3Q99LM2 Mir3108-201ENSMUST00000175500 79 ntBASIC0.17□□□□□ -2.38
Cdk5rap3Q99LM2 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.17□□□□□ -2.38
Cdk5rap3Q99LM2 Gm25588-201ENSMUST00000082501 140 ntBASIC0.17□□□□□ -2.38
Cdk5rap3Q99LM2 Gm22738-201ENSMUST00000083440 147 ntBASIC0.17□□□□□ -2.38
Cdk5rap3Q99LM2 Mir710-201ENSMUST00000102088 110 ntBASIC0.16□□□□□ -2.38
Cdk5rap3Q99LM2 Snord19-201ENSMUST00000104609 76 ntBASIC0.16□□□□□ -2.38
Cdk5rap3Q99LM2 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Cdk5rap3Q99LM2 Gm26279-201ENSMUST00000157095 102 ntBASIC0.16□□□□□ -2.38
Cdk5rap3Q99LM2 Mir6369-201ENSMUST00000183772 106 ntBASIC0.16□□□□□ -2.38
Cdk5rap3Q99LM2 Gm44455-201ENSMUST00000200061 82 ntBASIC0.16□□□□□ -2.38
Cdk5rap3Q99LM2 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.16□□□□□ -2.38
Cdk5rap3Q99LM2 Mir411-201ENSMUST00000083543 82 ntBASIC0.16□□□□□ -2.38
Cdk5rap3Q99LM2 Mir1899-201ENSMUST00000122798 96 ntBASIC0.15□□□□□ -2.39
Cdk5rap3Q99LM2 Gm24575-201ENSMUST00000175502 77 ntBASIC0.15□□□□□ -2.39
Cdk5rap3Q99LM2 Gm27905-201ENSMUST00000184005 207 ntBASIC0.15□□□□□ -2.39
Cdk5rap3Q99LM2 Mir721-201ENSMUST00000200230 88 ntBASIC0.15□□□□□ -2.39
Cdk5rap3Q99LM2 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.15□□□□□ -2.39
Cdk5rap3Q99LM2 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.15□□□□□ -2.39
Cdk5rap3Q99LM2 Gm10172-201ENSMUST00000085929 558 ntBASIC0.15□□□□□ -2.39
Cdk5rap3Q99LM2 Gm26420-201ENSMUST00000104273 103 ntBASIC0.14□□□□□ -2.39
Cdk5rap3Q99LM2 Gm16186-201ENSMUST00000120132 216 ntBASIC0.14□□□□□ -2.39
Cdk5rap3Q99LM2 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.14□□□□□ -2.39
Cdk5rap3Q99LM2 Gm22790-201ENSMUST00000157229 129 ntBASIC0.14□□□□□ -2.39
Cdk5rap3Q99LM2 Gm44308-201ENSMUST00000197080 99 ntBASIC0.14□□□□□ -2.39
Cdk5rap3Q99LM2 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.14□□□□□ -2.39
Cdk5rap3Q99LM2 Mir224-201ENSMUST00000083608 82 ntBASIC0.14□□□□□ -2.39
Cdk5rap3Q99LM2 Rny1-201ENSMUST00000083767 112 ntBASIC0.14□□□□□ -2.39
Cdk5rap3Q99LM2 Gm24121-201ENSMUST00000102029 106 ntBASIC0.13□□□□□ -2.39
Cdk5rap3Q99LM2 Gm22145-201ENSMUST00000157396 148 ntBASIC0.13□□□□□ -2.39
Cdk5rap3Q99LM2 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.13□□□□□ -2.39
Cdk5rap3Q99LM2 Gm23047-201ENSMUST00000177661 94 ntBASIC0.13□□□□□ -2.39
Cdk5rap3Q99LM2 Mir30f-201ENSMUST00000196073 92 ntBASIC0.13□□□□□ -2.39
Cdk5rap3Q99LM2 Mir377-201ENSMUST00000083504 68 ntBASIC0.13□□□□□ -2.39
Cdk5rap3Q99LM2 Gm15654-201ENSMUST00000152660 300 ntBASIC0.12□□□□□ -2.39
Cdk5rap3Q99LM2 Gm23821-201ENSMUST00000158738 106 ntBASIC0.12□□□□□ -2.39
Cdk5rap3Q99LM2 Gm25952-201ENSMUST00000175329 74 ntBASIC0.12□□□□□ -2.39
Cdk5rap3Q99LM2 Gm27943-201ENSMUST00000184844 116 ntBASIC0.12□□□□□ -2.39
Cdk5rap3Q99LM2 Gm8508-201ENSMUST00000061226 363 ntBASIC0.12□□□□□ -2.39
Cdk5rap3Q99LM2 Snord60-201ENSMUST00000082834 78 ntBASIC0.12□□□□□ -2.39
Cdk5rap3Q99LM2 Gm24342-201ENSMUST00000103907 104 ntBASIC0.11□□□□□ -2.39
Cdk5rap3Q99LM2 Gm22850-201ENSMUST00000157714 82 ntBASIC0.11□□□□□ -2.39
Cdk5rap3Q99LM2 Gm22332-201ENSMUST00000158072 126 ntBASIC0.11□□□□□ -2.39
Cdk5rap3Q99LM2 Gm26158-201ENSMUST00000158973 119 ntBASIC0.11□□□□□ -2.39
Cdk5rap3Q99LM2 Mir7039-201ENSMUST00000183852 85 ntBASIC0.11□□□□□ -2.39
Cdk5rap3Q99LM2 Gm25416-201ENSMUST00000104221 107 ntBASIC0.1□□□□□ -2.39
Cdk5rap3Q99LM2 Gm23892-201ENSMUST00000158105 130 ntBASIC0.1□□□□□ -2.39
Cdk5rap3Q99LM2 Gm23917-201ENSMUST00000175256 98 ntBASIC0.1□□□□□ -2.39
Cdk5rap3Q99LM2 Gm27476-201ENSMUST00000183366 104 ntBASIC0.1□□□□□ -2.39
Cdk5rap3Q99LM2 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.1□□□□□ -2.39
Cdk5rap3Q99LM2 Gm25894-201ENSMUST00000083458 75 ntBASIC0.1□□□□□ -2.39
Cdk5rap3Q99LM2 Gm24276-201ENSMUST00000102181 110 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Gm23126-201ENSMUST00000104260 134 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Gm23881-201ENSMUST00000116872 66 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Gm10548-202ENSMUST00000165672 272 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Gm24321-201ENSMUST00000175348 80 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Gm25397-201ENSMUST00000176951 92 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Mir219b-201ENSMUST00000198317 65 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Gm22744-201ENSMUST00000083444 65 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.09□□□□□ -2.4
Cdk5rap3Q99LM2 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Cdk5rap3Q99LM2 Gm24278-201ENSMUST00000104239 127 ntBASIC0.08□□□□□ -2.4
Cdk5rap3Q99LM2 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.08□□□□□ -2.4
Cdk5rap3Q99LM2 Mir6342-201ENSMUST00000183870 125 ntBASIC0.08□□□□□ -2.4
Cdk5rap3Q99LM2 Mir6928-201ENSMUST00000185166 70 ntBASIC0.08□□□□□ -2.4
Cdk5rap3Q99LM2 Gm44807-201ENSMUST00000206115 154 ntBASIC0.08□□□□□ -2.4
Cdk5rap3Q99LM2 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.08□□□□□ -2.4
Cdk5rap3Q99LM2 Gm24729-201ENSMUST00000158225 137 ntBASIC0.07□□□□□ -2.4
Cdk5rap3Q99LM2 Gm22433-201ENSMUST00000158550 142 ntBASIC0.07□□□□□ -2.4
Cdk5rap3Q99LM2 Mir3105-201ENSMUST00000175480 85 ntBASIC0.07□□□□□ -2.4
Cdk5rap3Q99LM2 Gm44469-201ENSMUST00000198558 79 ntBASIC0.07□□□□□ -2.4
Cdk5rap3Q99LM2 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Cdk5rap3Q99LM2 Mir670-201ENSMUST00000102380 100 ntBASIC0.06□□□□□ -2.4
Cdk5rap3Q99LM2 Mir466p-201ENSMUST00000103925 89 ntBASIC0.06□□□□□ -2.4
Cdk5rap3Q99LM2 Gm25610-201ENSMUST00000104016 129 ntBASIC0.06□□□□□ -2.4
Cdk5rap3Q99LM2 Gm22079-201ENSMUST00000157592 106 ntBASIC0.06□□□□□ -2.4
Cdk5rap3Q99LM2 Gm22557-201ENSMUST00000157804 102 ntBASIC0.06□□□□□ -2.4
Cdk5rap3Q99LM2 Gm22431-201ENSMUST00000158545 107 ntBASIC0.06□□□□□ -2.4
Cdk5rap3Q99LM2 Mir7077-201ENSMUST00000183991 57 ntBASIC0.06□□□□□ -2.4
Cdk5rap3Q99LM2 Gm22149-201ENSMUST00000104442 136 ntBASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 Gm23761-201ENSMUST00000158347 104 ntBASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 Gm23857-201ENSMUST00000158379 111 ntBASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 Gm26360-201ENSMUST00000158872 103 ntBASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 Gm28001-201ENSMUST00000183561 117 ntBASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 Gm27402-201ENSMUST00000183890 120 ntBASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 Snord95-201ENSMUST00000082846 68 ntBASIC0.05□□□□□ -2.4
Cdk5rap3Q99LM2 Gm14001-201ENSMUST00000118847 247 ntBASIC0.04□□□□□ -2.4
Cdk5rap3Q99LM2 Gm22101-201ENSMUST00000157928 103 ntBASIC0.04□□□□□ -2.4
Cdk5rap3Q99LM2 Gm22946-201ENSMUST00000158558 82 ntBASIC0.04□□□□□ -2.4
Cdk5rap3Q99LM2 Snora15-201ENSMUST00000177461 131 ntBASIC0.04□□□□□ -2.4
Cdk5rap3Q99LM2 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 229.4 ms