Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.83□□□□□ -2.54
Nup35Q8R4R6 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC-0.83□□□□□ -2.54
Nup35Q8R4R6 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.84□□□□□ -2.54
Nup35Q8R4R6 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.84□□□□□ -2.54
Nup35Q8R4R6 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.84□□□□□ -2.54
Nup35Q8R4R6 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.84□□□□□ -2.54
Nup35Q8R4R6 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.84□□□□□ -2.54
Nup35Q8R4R6 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.84□□□□□ -2.54
Nup35Q8R4R6 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.84□□□□□ -2.54
Nup35Q8R4R6 Snora62-201ENSMUST00000082991 149 ntBASIC-0.84□□□□□ -2.54
Nup35Q8R4R6 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.85□□□□□ -2.55
Nup35Q8R4R6 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.85□□□□□ -2.55
Nup35Q8R4R6 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.85□□□□□ -2.55
Nup35Q8R4R6 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.85□□□□□ -2.55
Nup35Q8R4R6 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.86□□□□□ -2.55
Nup35Q8R4R6 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.86□□□□□ -2.55
Nup35Q8R4R6 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.86□□□□□ -2.55
Nup35Q8R4R6 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.86□□□□□ -2.55
Nup35Q8R4R6 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.86□□□□□ -2.55
Nup35Q8R4R6 Rny3-201ENSMUST00000083011 102 ntBASIC-0.86□□□□□ -2.55
Nup35Q8R4R6 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.87□□□□□ -2.55
Nup35Q8R4R6 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.87□□□□□ -2.55
Nup35Q8R4R6 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.87□□□□□ -2.55
Nup35Q8R4R6 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.87□□□□□ -2.55
Nup35Q8R4R6 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.87□□□□□ -2.55
Nup35Q8R4R6 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Gm26056-201ENSMUST00000083043 104 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Mir363-201ENSMUST00000093598 75 ntBASIC-0.88□□□□□ -2.55
Nup35Q8R4R6 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.89□□□□□ -2.55
Nup35Q8R4R6 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.89□□□□□ -2.55
Nup35Q8R4R6 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.89□□□□□ -2.55
Nup35Q8R4R6 Gm25007-201ENSMUST00000083808 133 ntBASIC-0.89□□□□□ -2.55
Nup35Q8R4R6 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.9□□□□□ -2.55
Nup35Q8R4R6 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.9□□□□□ -2.55
Nup35Q8R4R6 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.9□□□□□ -2.55
Nup35Q8R4R6 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.9□□□□□ -2.55
Nup35Q8R4R6 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.9□□□□□ -2.55
Nup35Q8R4R6 Gm25937-201ENSMUST00000083912 107 ntBASIC-0.9□□□□□ -2.55
Nup35Q8R4R6 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.91□□□□□ -2.56
Nup35Q8R4R6 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.91□□□□□ -2.56
Nup35Q8R4R6 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.91□□□□□ -2.56
Nup35Q8R4R6 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.91□□□□□ -2.56
Nup35Q8R4R6 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.91□□□□□ -2.56
Nup35Q8R4R6 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.91□□□□□ -2.56
Nup35Q8R4R6 Gm24150-201ENSMUST00000082759 104 ntBASIC-0.91□□□□□ -2.56
Nup35Q8R4R6 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.92□□□□□ -2.56
Nup35Q8R4R6 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.92□□□□□ -2.56
Nup35Q8R4R6 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.92□□□□□ -2.56
Nup35Q8R4R6 Gm27539-201ENSMUST00000184971 224 ntBASIC-0.92□□□□□ -2.56
Nup35Q8R4R6 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.92□□□□□ -2.56
Nup35Q8R4R6 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
Nup35Q8R4R6 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.92□□□□□ -2.56
Nup35Q8R4R6 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.93□□□□□ -2.56
Nup35Q8R4R6 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.93□□□□□ -2.56
Nup35Q8R4R6 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.93□□□□□ -2.56
Nup35Q8R4R6 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.93□□□□□ -2.56
Nup35Q8R4R6 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
Nup35Q8R4R6 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 Gm25982-201ENSMUST00000157920 101 ntBASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 AC131720.2-201ENSMUST00000220420 431 ntBASIC-0.94□□□□□ -2.56
Nup35Q8R4R6 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.95□□□□□ -2.56
Nup35Q8R4R6 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.96□□□□□ -2.56
Nup35Q8R4R6 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.96□□□□□ -2.56
Nup35Q8R4R6 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.96□□□□□ -2.56
Nup35Q8R4R6 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.96□□□□□ -2.56
Nup35Q8R4R6 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.96□□□□□ -2.56
Nup35Q8R4R6 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.96□□□□□ -2.56
Nup35Q8R4R6 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.96□□□□□ -2.56
Nup35Q8R4R6 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
Nup35Q8R4R6 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
Nup35Q8R4R6 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
Nup35Q8R4R6 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms