Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm24412-201ENSMUST00000083426 109 ntBASIC2,49□□□□□ -2,01
Chmp7Q8R1T1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 Mir3083-201ENSMUST00000175377 64 ntBASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 Mir7232-201ENSMUST00000197929 74 ntBASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 Gm44807-201ENSMUST00000206115 154 ntBASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 AC168062.3-201ENSMUST00000227025 165 ntBASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 Gm25636-201ENSMUST00000082666 133 ntBASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 Gm26123-201ENSMUST00000083363 135 ntBASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 Mir107-201ENSMUST00000083660 87 ntBASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 Snora69-201ENSMUST00000083708 131 ntBASIC2,48□□□□□ -2,01
Chmp7Q8R1T1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Gm22319-201ENSMUST00000157147 122 ntBASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Gm25241-201ENSMUST00000174909 84 ntBASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Gm26217-201ENSMUST00000175212 84 ntBASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Mir7679-201ENSMUST00000183379 63 ntBASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Mir6419-201ENSMUST00000184784 113 ntBASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 AC129085.5-201ENSMUST00000225468 400 ntBASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Gm24099-201ENSMUST00000083384 107 ntBASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Gm44578-201ENSMUST00000207236 3835 ntBASIC2,47□□□□□ -2,01
Chmp7Q8R1T1 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2,46□□□□□ -2,02
Chmp7Q8R1T1 Gm25610-201ENSMUST00000104016 129 ntBASIC2,46□□□□□ -2,02
Chmp7Q8R1T1 Gm26104-201ENSMUST00000157250 108 ntBASIC2,46□□□□□ -2,02
Chmp7Q8R1T1 Gm23033-201ENSMUST00000157996 134 ntBASIC2,46□□□□□ -2,02
Chmp7Q8R1T1 Gm44308-201ENSMUST00000197080 99 ntBASIC2,46□□□□□ -2,02
Chmp7Q8R1T1 Gm23652-201ENSMUST00000116752 107 ntBASIC2,45□□□□□ -2,02
Chmp7Q8R1T1 Gm25680-201ENSMUST00000116917 126 ntBASIC2,45□□□□□ -2,02
Chmp7Q8R1T1 Gm22635-201ENSMUST00000116962 126 ntBASIC2,45□□□□□ -2,02
Chmp7Q8R1T1 Gm14588-201ENSMUST00000119895 172 ntBASIC2,45□□□□□ -2,02
Chmp7Q8R1T1 Gm23601-201ENSMUST00000157259 131 ntBASIC2,45□□□□□ -2,02
Chmp7Q8R1T1 Gm23817-201ENSMUST00000158449 104 ntBASIC2,45□□□□□ -2,02
Chmp7Q8R1T1 Gm23384-201ENSMUST00000158593 103 ntBASIC2,45□□□□□ -2,02
Chmp7Q8R1T1 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 Gm26253-201ENSMUST00000122493 103 ntBASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 n-R5s39-201ENSMUST00000122613 108 ntBASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 Gm22815-201ENSMUST00000157451 62 ntBASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 Gm22556-201ENSMUST00000157803 100 ntBASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 Gm25949-201ENSMUST00000175333 114 ntBASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 Snord87-201ENSMUST00000175437 87 ntBASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 Mir9-3-201ENSMUST00000175497 90 ntBASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 n-R5s197-201ENSMUST00000083302 119 ntBASIC2,44□□□□□ -2,02
Chmp7Q8R1T1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2,43□□□□□ -2,02
Chmp7Q8R1T1 Gm23375-201ENSMUST00000175407 83 ntBASIC2,43□□□□□ -2,02
Chmp7Q8R1T1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2,43□□□□□ -2,02
Chmp7Q8R1T1 Gm24523-201ENSMUST00000083965 132 ntBASIC2,43□□□□□ -2,02
Chmp7Q8R1T1 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2,43□□□□□ -2,02
Chmp7Q8R1T1 Mir654-201ENSMUST00000104787 84 ntBASIC2,42□□□□□ -2,02
Chmp7Q8R1T1 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2,42□□□□□ -2,02
Chmp7Q8R1T1 Gm22425-201ENSMUST00000158532 138 ntBASIC2,42□□□□□ -2,02
Chmp7Q8R1T1 Gm24880-201ENSMUST00000158776 85 ntBASIC2,42□□□□□ -2,02
Chmp7Q8R1T1 Gm25368-201ENSMUST00000158847 131 ntBASIC2,42□□□□□ -2,02
Chmp7Q8R1T1 Gm16539-201ENSMUST00000160086 327 ntBASIC2,42□□□□□ -2,02
Chmp7Q8R1T1 Gm24638-201ENSMUST00000179807 132 ntBASIC2,42□□□□□ -2,02
Chmp7Q8R1T1 Gm25289-201ENSMUST00000122799 119 ntBASIC2,41□□□□□ -2,02
Chmp7Q8R1T1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2,41□□□□□ -2,02
Chmp7Q8R1T1 Gm24524-201ENSMUST00000082925 170 ntBASIC2,41□□□□□ -2,02
Chmp7Q8R1T1 Gm25329-201ENSMUST00000158041 126 ntBASIC2,4□□□□□ -2,03
Chmp7Q8R1T1 Gm25044-201ENSMUST00000158603 104 ntBASIC2,4□□□□□ -2,03
Chmp7Q8R1T1 Mir21c-201ENSMUST00000184910 78 ntBASIC2,4□□□□□ -2,03
Chmp7Q8R1T1 Mir3087-201ENSMUST00000199405 56 ntBASIC2,4□□□□□ -2,03
Chmp7Q8R1T1 Mir221-201ENSMUST00000083488 95 ntBASIC2,4□□□□□ -2,03
Chmp7Q8R1T1 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2,4□□□□□ -2,03
Chmp7Q8R1T1 Gm44133-202ENSMUST00000204450 2586 ntBASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gm23986-201ENSMUST00000157144 63 ntBASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gm22963-201ENSMUST00000157960 91 ntBASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gm25011-201ENSMUST00000158398 126 ntBASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gm29535-201ENSMUST00000185723 109 ntBASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gm28143-201ENSMUST00000191082 109 ntBASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gm42935-201ENSMUST00000202004 151 ntBASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gm43977-201ENSMUST00000203970 189 ntBASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2,39□□□□□ -2,03
Chmp7Q8R1T1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2,38□□□□□ -2,03
Chmp7Q8R1T1 Gm22554-201ENSMUST00000157798 147 ntBASIC2,38□□□□□ -2,03
Chmp7Q8R1T1 Mir7021-201ENSMUST00000197026 63 ntBASIC2,38□□□□□ -2,03
Chmp7Q8R1T1 Gm25820-201ENSMUST00000198589 127 ntBASIC2,38□□□□□ -2,03
Chmp7Q8R1T1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2,37□□□□□ -2,03
Chmp7Q8R1T1 Mir301b-201ENSMUST00000102333 97 ntBASIC2,37□□□□□ -2,03
Chmp7Q8R1T1 Gm24076-201ENSMUST00000158179 94 ntBASIC2,37□□□□□ -2,03
Chmp7Q8R1T1 Mir3057-201ENSMUST00000175040 91 ntBASIC2,37□□□□□ -2,03
Chmp7Q8R1T1 AC141438.3-201ENSMUST00000215632 202 ntBASIC2,37□□□□□ -2,03
Chmp7Q8R1T1 CT571266.1-201ENSMUST00000222859 153 ntBASIC2,37□□□□□ -2,03
Chmp7Q8R1T1 Gm24044-201ENSMUST00000083107 156 ntBASIC2,37□□□□□ -2,03
Chmp7Q8R1T1 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2,37□□□□□ -2,03
Chmp7Q8R1T1 Gm26051-201ENSMUST00000104642 93 ntBASIC2,36□□□□□ -2,03
Chmp7Q8R1T1 Gm25370-201ENSMUST00000158159 94 ntBASIC2,36□□□□□ -2,03
Chmp7Q8R1T1 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2,36□□□□□ -2,03
Chmp7Q8R1T1 Gm26466-201ENSMUST00000179615 79 ntBASIC2,36□□□□□ -2,03
Chmp7Q8R1T1 Mir423-201ENSMUST00000083584 109 ntBASIC2,36□□□□□ -2,03
Chmp7Q8R1T1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Gm11248-201ENSMUST00000119568 201 ntBASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Gm22089-201ENSMUST00000158336 102 ntBASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Gm23351-201ENSMUST00000158427 125 ntBASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Snora24-201ENSMUST00000174989 130 ntBASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Gm37557-201ENSMUST00000191640 139 ntBASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Gm37778-201ENSMUST00000191732 190 ntBASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Gm44462-201ENSMUST00000199696 129 ntBASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 AC166341.8-201ENSMUST00000221267 108 ntBASIC2,35□□□□□ -2,03
Chmp7Q8R1T1 Gm23790-201ENSMUST00000083013 107 ntBASIC2,35□□□□□ -2,03
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms