Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm25060-201ENSMUST00000157374 130 ntBASIC0.99□□□□□ -2.25
Ccdc28bQ8CEG5 Gm22775-201ENSMUST00000177630 120 ntBASIC0.99□□□□□ -2.25
Ccdc28bQ8CEG5 Mir669j-201ENSMUST00000179023 121 ntBASIC0.99□□□□□ -2.25
Ccdc28bQ8CEG5 Gm23569-201ENSMUST00000180120 120 ntBASIC0.99□□□□□ -2.25
Ccdc28bQ8CEG5 Gm27851-201ENSMUST00000183529 63 ntBASIC0.99□□□□□ -2.25
Ccdc28bQ8CEG5 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.99□□□□□ -2.25
Ccdc28bQ8CEG5 Gm23509-201ENSMUST00000083080 160 ntBASIC0.99□□□□□ -2.25
Ccdc28bQ8CEG5 Mir22-201ENSMUST00000083595 95 ntBASIC0.99□□□□□ -2.25
Ccdc28bQ8CEG5 Gm26011-201ENSMUST00000104410 104 ntBASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Gm22966-201ENSMUST00000157957 129 ntBASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Gm23260-201ENSMUST00000158317 172 ntBASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Gm24020-201ENSMUST00000180156 108 ntBASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Gm43898-201ENSMUST00000204456 424 ntBASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Gm25636-201ENSMUST00000082666 133 ntBASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Gm25814-201ENSMUST00000082754 107 ntBASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
Ccdc28bQ8CEG5 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Ccdc28bQ8CEG5 Gm14626-201ENSMUST00000117619 216 ntBASIC0.97□□□□□ -2.25
Ccdc28bQ8CEG5 Gm22551-201ENSMUST00000157795 103 ntBASIC0.97□□□□□ -2.25
Ccdc28bQ8CEG5 Gm24401-201ENSMUST00000157868 91 ntBASIC0.97□□□□□ -2.25
Ccdc28bQ8CEG5 Gm26084-201ENSMUST00000157903 104 ntBASIC0.97□□□□□ -2.25
Ccdc28bQ8CEG5 Gm26029-201ENSMUST00000158659 132 ntBASIC0.97□□□□□ -2.25
Ccdc28bQ8CEG5 Gm27420-201ENSMUST00000183823 79 ntBASIC0.97□□□□□ -2.25
Ccdc28bQ8CEG5 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Ccdc28bQ8CEG5 Gm25832-201ENSMUST00000104140 130 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Gm22556-201ENSMUST00000157803 100 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24808-201ENSMUST00000157993 118 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Gm23289-201ENSMUST00000175615 108 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24638-201ENSMUST00000179807 132 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Mir7225-201ENSMUST00000184178 54 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Gm44462-201ENSMUST00000199696 129 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Gm22809-201ENSMUST00000082743 156 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Ccdc28bQ8CEG5 Mir547-201ENSMUST00000102051 78 ntBASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm26091-201ENSMUST00000122704 82 ntBASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24718-201ENSMUST00000157521 136 ntBASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm23083-201ENSMUST00000157851 116 ntBASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm22887-201ENSMUST00000178586 107 ntBASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm27668-201ENSMUST00000184188 120 ntBASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm42795-201ENSMUST00000198847 76 ntBASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm44320-201ENSMUST00000199276 86 ntBASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.95□□□□□ -2.26
Ccdc28bQ8CEG5 Gm25610-201ENSMUST00000104016 129 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24509-201ENSMUST00000157086 101 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm25358-201ENSMUST00000157189 101 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm23253-201ENSMUST00000157441 104 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm23114-201ENSMUST00000158478 117 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24167-201ENSMUST00000177733 124 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24028-201ENSMUST00000178991 124 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Mir6377-201ENSMUST00000183760 114 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm44807-201ENSMUST00000206115 154 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm25128-201ENSMUST00000083339 76 ntBASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24271-201ENSMUST00000102327 111 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24076-201ENSMUST00000158179 94 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24676-201ENSMUST00000158758 75 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Gm16550-201ENSMUST00000162550 126 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Mir3094-201ENSMUST00000175121 64 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Mir468-201ENSMUST00000197332 78 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Gm26224-201ENSMUST00000082506 80 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Snora41-201ENSMUST00000082668 132 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24252-201ENSMUST00000083700 132 ntBASIC0.93□□□□□ -2.26
Ccdc28bQ8CEG5 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Ccdc28bQ8CEG5 Mir3098-201ENSMUST00000175416 87 ntBASIC0.92□□□□□ -2.26
Ccdc28bQ8CEG5 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.92□□□□□ -2.26
Ccdc28bQ8CEG5 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.92□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24449-201ENSMUST00000083985 106 ntBASIC0.92□□□□□ -2.26
Ccdc28bQ8CEG5 Gm26080-201ENSMUST00000104069 131 ntBASIC0.91□□□□□ -2.26
Ccdc28bQ8CEG5 Gm24246-201ENSMUST00000157315 132 ntBASIC0.91□□□□□ -2.26
Ccdc28bQ8CEG5 Gm23838-201ENSMUST00000158067 162 ntBASIC0.91□□□□□ -2.26
Ccdc28bQ8CEG5 Mir1961-201ENSMUST00000158643 112 ntBASIC0.91□□□□□ -2.26
Ccdc28bQ8CEG5 Gm16307-201ENSMUST00000161269 210 ntBASIC0.91□□□□□ -2.26
Ccdc28bQ8CEG5 Gm44301-201ENSMUST00000200362 143 ntBASIC0.91□□□□□ -2.26
Ccdc28bQ8CEG5 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.91□□□□□ -2.26
Ccdc28bQ8CEG5 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.91□□□□□ -2.26
Ccdc28bQ8CEG5 Gm22689-201ENSMUST00000102452 110 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Gm25938-201ENSMUST00000104139 166 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Gm22451-201ENSMUST00000122803 151 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Gm7258-201ENSMUST00000179317 300 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Gm27898-201ENSMUST00000183987 80 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Mir7009-201ENSMUST00000184519 64 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Gm44396-201ENSMUST00000199843 114 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Gm44948-201ENSMUST00000209050 149 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Mir532-201ENSMUST00000093630 96 ntBASIC0.9□□□□□ -2.27
Ccdc28bQ8CEG5 Mir709-201ENSMUST00000102190 88 ntBASIC0.89□□□□□ -2.27
Ccdc28bQ8CEG5 Gm22780-201ENSMUST00000104084 132 ntBASIC0.89□□□□□ -2.27
Ccdc28bQ8CEG5 Gm15289-201ENSMUST00000117793 244 ntBASIC0.89□□□□□ -2.27
Ccdc28bQ8CEG5 Gm14039-201ENSMUST00000118705 101 ntBASIC0.89□□□□□ -2.27
Ccdc28bQ8CEG5 Mir7657-201ENSMUST00000196051 57 ntBASIC0.89□□□□□ -2.27
Ccdc28bQ8CEG5 Gm25851-201ENSMUST00000082794 107 ntBASIC0.89□□□□□ -2.27
Ccdc28bQ8CEG5 Mir324-201ENSMUST00000083600 89 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms