Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.8□□□□□ -2.28
Nup88Q8CEC0 Gm16265-201ENSMUST00000134558 108 ntBASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Gm24509-201ENSMUST00000157086 101 ntBASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Gm25358-201ENSMUST00000157189 101 ntBASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Gm22557-201ENSMUST00000157804 102 ntBASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Gm28435-201ENSMUST00000185496 108 ntBASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Mir721-201ENSMUST00000200230 88 ntBASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Snord33-201ENSMUST00000083694 84 ntBASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Mir362-201ENSMUST00000093592 65 ntBASIC0.79□□□□□ -2.28
Nup88Q8CEC0 Gm23321-201ENSMUST00000104465 126 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm24250-201ENSMUST00000157320 135 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Mir1933-201ENSMUST00000158930 88 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm23770-201ENSMUST00000178009 108 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm22832-201ENSMUST00000178022 108 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm23863-201ENSMUST00000178265 108 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm24828-201ENSMUST00000178507 108 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm23052-201ENSMUST00000178633 108 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm25729-201ENSMUST00000179050 108 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm25359-201ENSMUST00000179315 108 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm22624-201ENSMUST00000179913 108 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Mir219b-201ENSMUST00000198317 65 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Mir101a-201ENSMUST00000083517 83 ntBASIC0.78□□□□□ -2.28
Nup88Q8CEC0 Gm24555-201ENSMUST00000104548 124 ntBASIC0.77□□□□□ -2.29
Nup88Q8CEC0 Gm25985-201ENSMUST00000122677 107 ntBASIC0.77□□□□□ -2.29
Nup88Q8CEC0 Gm22790-201ENSMUST00000157229 129 ntBASIC0.77□□□□□ -2.29
Nup88Q8CEC0 Gm22476-201ENSMUST00000158902 100 ntBASIC0.77□□□□□ -2.29
Nup88Q8CEC0 Gm16546-201ENSMUST00000159442 355 ntBASIC0.77□□□□□ -2.29
Nup88Q8CEC0 Gm23423-201ENSMUST00000082782 106 ntBASIC0.77□□□□□ -2.29
Nup88Q8CEC0 Mir30a-201ENSMUST00000083471 71 ntBASIC0.77□□□□□ -2.29
Nup88Q8CEC0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
Nup88Q8CEC0 Gm22786-201ENSMUST00000104086 122 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm23203-201ENSMUST00000104374 107 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm24590-201ENSMUST00000116699 119 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm25544-201ENSMUST00000122676 120 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm23838-201ENSMUST00000158067 162 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm22612-201ENSMUST00000158293 101 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm25769-201ENSMUST00000158569 127 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm27285-201ENSMUST00000183875 127 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm43944-201ENSMUST00000205220 120 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm22576-201ENSMUST00000083733 104 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Mir500-201ENSMUST00000093600 92 ntBASIC0.76□□□□□ -2.29
Nup88Q8CEC0 Gm25611-201ENSMUST00000104017 133 ntBASIC0.75□□□□□ -2.29
Nup88Q8CEC0 Gm22431-201ENSMUST00000158545 107 ntBASIC0.75□□□□□ -2.29
Nup88Q8CEC0 Gm24678-201ENSMUST00000158756 104 ntBASIC0.75□□□□□ -2.29
Nup88Q8CEC0 Gm27465-201ENSMUST00000184290 91 ntBASIC0.75□□□□□ -2.29
Nup88Q8CEC0 Gm37997-201ENSMUST00000193515 267 ntBASIC0.75□□□□□ -2.29
Nup88Q8CEC0 Gm8219-201ENSMUST00000218309 242 ntBASIC0.75□□□□□ -2.29
Nup88Q8CEC0 Gm26420-201ENSMUST00000104273 103 ntBASIC0.74□□□□□ -2.29
Nup88Q8CEC0 Gm24747-201ENSMUST00000157835 87 ntBASIC0.74□□□□□ -2.29
Nup88Q8CEC0 Gm45002-201ENSMUST00000208045 120 ntBASIC0.74□□□□□ -2.29
Nup88Q8CEC0 Gm25138-201ENSMUST00000083248 136 ntBASIC0.74□□□□□ -2.29
Nup88Q8CEC0 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.74□□□□□ -2.29
Nup88Q8CEC0 Gm23772-201ENSMUST00000104433 102 ntBASIC0.73□□□□□ -2.29
Nup88Q8CEC0 Gm25247-201ENSMUST00000175475 90 ntBASIC0.73□□□□□ -2.29
Nup88Q8CEC0 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.73□□□□□ -2.29
Nup88Q8CEC0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Nup88Q8CEC0 Gm23853-201ENSMUST00000158375 104 ntBASIC0.72□□□□□ -2.29
Nup88Q8CEC0 Gm23416-201ENSMUST00000175520 95 ntBASIC0.72□□□□□ -2.29
Nup88Q8CEC0 Gm22259-201ENSMUST00000178926 107 ntBASIC0.72□□□□□ -2.29
Nup88Q8CEC0 Gm6272-201ENSMUST00000121256 171 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Gm22079-201ENSMUST00000157592 106 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Gm24772-201ENSMUST00000158507 110 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Gm16550-201ENSMUST00000162550 126 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Gm22887-201ENSMUST00000178586 107 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Gm24415-201ENSMUST00000180218 107 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Gm37586-201ENSMUST00000193654 204 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Gm37624-201ENSMUST00000193751 219 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Mir532-201ENSMUST00000093630 96 ntBASIC0.71□□□□□ -2.3
Nup88Q8CEC0 Gm25378-201ENSMUST00000104333 129 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 Gm24549-201ENSMUST00000158647 139 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 Gm22466-201ENSMUST00000175278 69 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 Mir6390-201ENSMUST00000184405 129 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 Gm42795-201ENSMUST00000198847 76 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.7□□□□□ -2.3
Nup88Q8CEC0 Gm26421-201ENSMUST00000104279 132 ntBASIC0.69□□□□□ -2.3
Nup88Q8CEC0 Gm22796-201ENSMUST00000157234 106 ntBASIC0.69□□□□□ -2.3
Nup88Q8CEC0 Gm25633-201ENSMUST00000178565 107 ntBASIC0.69□□□□□ -2.3
Nup88Q8CEC0 Gm44488-201ENSMUST00000199467 119 ntBASIC0.69□□□□□ -2.3
Nup88Q8CEC0 Gm44211-201ENSMUST00000204867 145 ntBASIC0.69□□□□□ -2.3
Nup88Q8CEC0 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Nup88Q8CEC0 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.69□□□□□ -2.3
Nup88Q8CEC0 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.68□□□□□ -2.3
Nup88Q8CEC0 Gm22332-201ENSMUST00000158072 126 ntBASIC0.68□□□□□ -2.3
Nup88Q8CEC0 Gm24547-201ENSMUST00000158649 149 ntBASIC0.68□□□□□ -2.3
Nup88Q8CEC0 Mir6928-201ENSMUST00000185166 70 ntBASIC0.68□□□□□ -2.3
Nup88Q8CEC0 Snord80-202ENSMUST00000199023 77 ntBASIC0.68□□□□□ -2.3
Nup88Q8CEC0 Mir201-201ENSMUST00000083470 66 ntBASIC0.68□□□□□ -2.3
Nup88Q8CEC0 Mir411-201ENSMUST00000083543 82 ntBASIC0.68□□□□□ -2.3
Nup88Q8CEC0 Gm24258-201ENSMUST00000083739 133 ntBASIC0.68□□□□□ -2.3
Nup88Q8CEC0 Gm23080-201ENSMUST00000157846 103 ntBASIC0.67□□□□□ -2.3
Nup88Q8CEC0 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.67□□□□□ -2.3
Nup88Q8CEC0 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.67□□□□□ -2.3
Nup88Q8CEC0 Gm24527-201ENSMUST00000082920 107 ntBASIC0.67□□□□□ -2.3
Nup88Q8CEC0 Gm23605-201ENSMUST00000157255 127 ntBASIC0.66□□□□□ -2.3
Nup88Q8CEC0 Gm24728-201ENSMUST00000158226 125 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms