Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.39□□□□□ -2.47
Trub1Q8C0D0 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.39□□□□□ -2.47
Trub1Q8C0D0 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.39□□□□□ -2.47
Trub1Q8C0D0 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.39□□□□□ -2.47
Trub1Q8C0D0 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm25664-201ENSMUST00000157697 107 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm26287-201ENSMUST00000158887 81 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 AC166341.3-201ENSMUST00000221861 114 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.4□□□□□ -2.47
Trub1Q8C0D0 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.41□□□□□ -2.48
Trub1Q8C0D0 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Gm22448-201ENSMUST00000179254 107 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.42□□□□□ -2.48
Trub1Q8C0D0 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-0.43□□□□□ -2.48
Trub1Q8C0D0 Gm44858-201ENSMUST00000207360 154 ntBASIC-0.43□□□□□ -2.48
Trub1Q8C0D0 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.43□□□□□ -2.48
Trub1Q8C0D0 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm24211-201ENSMUST00000158264 107 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm23242-201ENSMUST00000083055 107 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.44□□□□□ -2.48
Trub1Q8C0D0 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm26474-201ENSMUST00000116762 122 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Mir5624-201ENSMUST00000176635 61 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm37404-201ENSMUST00000195726 359 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.45□□□□□ -2.48
Trub1Q8C0D0 Snord100-201ENSMUST00000116836 74 ntBASIC-0.46□□□□□ -2.48
Trub1Q8C0D0 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.46□□□□□ -2.48
Trub1Q8C0D0 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.46□□□□□ -2.48
Trub1Q8C0D0 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.46□□□□□ -2.48
Trub1Q8C0D0 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.46□□□□□ -2.48
Trub1Q8C0D0 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.46□□□□□ -2.48
Trub1Q8C0D0 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.46□□□□□ -2.48
Trub1Q8C0D0 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm11835-201ENSMUST00000120635 663 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm44387-201ENSMUST00000196298 145 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.47□□□□□ -2.48
Trub1Q8C0D0 Gm23941-201ENSMUST00000101953 107 ntBASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Mir7227-201ENSMUST00000200408 59 ntBASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
Trub1Q8C0D0 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.49□□□□□ -2.49
Trub1Q8C0D0 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.49□□□□□ -2.49
Trub1Q8C0D0 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 259.9 ms