Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Mir1950-201ENSMUST00000158526 74 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm45544-201ENSMUST00000211130 88 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm26441-201ENSMUST00000082590 104 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm24536-201ENSMUST00000083144 107 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm22761-201ENSMUST00000102278 96 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Gm22151-201ENSMUST00000116963 58 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Mir6237-201ENSMUST00000183808 91 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Gm25697-201ENSMUST00000082902 98 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm22556-201ENSMUST00000157803 100 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm25329-201ENSMUST00000158041 126 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm22535-201ENSMUST00000158174 119 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm27544-201ENSMUST00000185069 155 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm37778-201ENSMUST00000191732 190 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Mir7021-201ENSMUST00000197026 63 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm20108-201ENSMUST00000219977 153 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm25357-201ENSMUST00000082745 72 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.48□□□□□ -2.01
Usp40Q8BWR4 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm42795-201ENSMUST00000198847 76 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Mir3087-201ENSMUST00000199405 56 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Gm25855-201ENSMUST00000082787 72 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Gm24527-201ENSMUST00000082920 107 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Gm25279-201ENSMUST00000122608 133 ntBASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Mir21c-201ENSMUST00000184910 78 ntBASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Mir6376-201ENSMUST00000185149 131 ntBASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Gm3702-201ENSMUST00000211754 346 ntBASIC2.46□□□□□ -2.02
Usp40Q8BWR4 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.46□□□□□ -2.02
Usp40Q8BWR4 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Mir802-201ENSMUST00000103258 97 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gm22089-201ENSMUST00000158336 102 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gm23761-201ENSMUST00000158347 104 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Snord118-201ENSMUST00000082965 135 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gm25337-201ENSMUST00000083723 104 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gm24183-201ENSMUST00000122572 93 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm23983-201ENSMUST00000157142 114 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm23826-201ENSMUST00000157394 119 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm22731-201ENSMUST00000158086 94 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm25371-201ENSMUST00000158162 101 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Mir7215-201ENSMUST00000200383 51 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm22458-201ENSMUST00000082576 107 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm25696-201ENSMUST00000082900 105 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm25832-201ENSMUST00000104140 130 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 Gm22522-201ENSMUST00000158271 151 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 Gm5900-201ENSMUST00000179862 375 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 Trbv25-201ENSMUST00000194700 273 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 Mir301b-201ENSMUST00000102333 97 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Mir293-201ENSMUST00000104841 80 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm24238-201ENSMUST00000157792 98 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm22554-201ENSMUST00000157798 147 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm23033-201ENSMUST00000157996 134 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm25229-201ENSMUST00000178587 79 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm24064-201ENSMUST00000157486 106 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Gm24076-201ENSMUST00000158179 94 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Gm25636-201ENSMUST00000082666 133 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Snora20-201ENSMUST00000082703 128 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Gm24038-201ENSMUST00000082872 159 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Snord104-201ENSMUST00000083192 70 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.4□□□□□ -2.02
Usp40Q8BWR4 Gm22677-201ENSMUST00000116977 108 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Gm11333-201ENSMUST00000119479 148 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Gm26369-201ENSMUST00000157825 100 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Gm24000-201ENSMUST00000158063 89 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Mir6950-201ENSMUST00000184438 73 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Mir148b-201ENSMUST00000083626 97 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Mir490-201ENSMUST00000093567 84 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Gm22338-201ENSMUST00000157715 129 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm23181-201ENSMUST00000158685 110 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm25740-201ENSMUST00000180247 107 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm27987-201ENSMUST00000184023 93 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm27975-201ENSMUST00000184400 101 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm18433-201ENSMUST00000192747 197 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm42807-201ENSMUST00000200141 329 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 AC122335.1-201ENSMUST00000217587 175 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Mir301-201ENSMUST00000083655 86 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.38□□□□□ -2.03
Usp40Q8BWR4 Gm22082-201ENSMUST00000157587 161 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 139.9 ms