Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm37845-201ENSMUST00000194977 355 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.17□□□□□ -2.44
Ccdc40Q8BI79 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Ccdc40Q8BI79 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.17□□□□□ -2.44
Ccdc40Q8BI79 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.17□□□□□ -2.44
Ccdc40Q8BI79 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.17□□□□□ -2.44
Ccdc40Q8BI79 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.17□□□□□ -2.44
Ccdc40Q8BI79 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.17□□□□□ -2.44
Ccdc40Q8BI79 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.17□□□□□ -2.44
Ccdc40Q8BI79 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm22434-201ENSMUST00000158549 122 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Mir384-201ENSMUST00000083565 88 ntBASIC-0.18□□□□□ -2.44
Ccdc40Q8BI79 Mir875-201ENSMUST00000104698 78 ntBASIC-0.19□□□□□ -2.44
Ccdc40Q8BI79 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.19□□□□□ -2.44
Ccdc40Q8BI79 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.19□□□□□ -2.44
Ccdc40Q8BI79 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.19□□□□□ -2.44
Ccdc40Q8BI79 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.19□□□□□ -2.44
Ccdc40Q8BI79 Gm25512-201ENSMUST00000083863 107 ntBASIC-0.19□□□□□ -2.44
Ccdc40Q8BI79 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.2□□□□□ -2.44
Ccdc40Q8BI79 Gm23214-201ENSMUST00000122716 157 ntBASIC-0.2□□□□□ -2.44
Ccdc40Q8BI79 Gm26026-201ENSMUST00000122726 123 ntBASIC-0.2□□□□□ -2.44
Ccdc40Q8BI79 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.2□□□□□ -2.44
Ccdc40Q8BI79 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.2□□□□□ -2.44
Ccdc40Q8BI79 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.21□□□□□ -2.44
Ccdc40Q8BI79 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.21□□□□□ -2.44
Ccdc40Q8BI79 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.21□□□□□ -2.44
Ccdc40Q8BI79 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.21□□□□□ -2.44
Ccdc40Q8BI79 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
Ccdc40Q8BI79 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.22□□□□□ -2.44
Ccdc40Q8BI79 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.22□□□□□ -2.44
Ccdc40Q8BI79 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.22□□□□□ -2.44
Ccdc40Q8BI79 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.22□□□□□ -2.44
Ccdc40Q8BI79 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.22□□□□□ -2.44
Ccdc40Q8BI79 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.22□□□□□ -2.44
Ccdc40Q8BI79 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.23□□□□□ -2.45
Ccdc40Q8BI79 Gm27845-201ENSMUST00000184479 114 ntBASIC-0.23□□□□□ -2.45
Ccdc40Q8BI79 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.23□□□□□ -2.45
Ccdc40Q8BI79 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.23□□□□□ -2.45
Ccdc40Q8BI79 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.23□□□□□ -2.45
Ccdc40Q8BI79 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.23□□□□□ -2.45
Ccdc40Q8BI79 Mir146-201ENSMUST00000083667 65 ntBASIC-0.23□□□□□ -2.45
Ccdc40Q8BI79 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.23□□□□□ -2.45
Ccdc40Q8BI79 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Gm23581-201ENSMUST00000158531 63 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Snord85-201ENSMUST00000083262 73 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Gm23451-201ENSMUST00000083328 122 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.24□□□□□ -2.45
Ccdc40Q8BI79 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Ccdc40Q8BI79 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.25□□□□□ -2.45
Ccdc40Q8BI79 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.25□□□□□ -2.45
Ccdc40Q8BI79 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.25□□□□□ -2.45
Ccdc40Q8BI79 Mir18-201ENSMUST00000083469 96 ntBASIC-0.25□□□□□ -2.45
Ccdc40Q8BI79 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-0.25□□□□□ -2.45
Ccdc40Q8BI79 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.26□□□□□ -2.45
Ccdc40Q8BI79 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.26□□□□□ -2.45
Ccdc40Q8BI79 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.26□□□□□ -2.45
Ccdc40Q8BI79 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.26□□□□□ -2.45
Ccdc40Q8BI79 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.26□□□□□ -2.45
Ccdc40Q8BI79 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.26□□□□□ -2.45
Ccdc40Q8BI79 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.27□□□□□ -2.45
Ccdc40Q8BI79 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.27□□□□□ -2.45
Ccdc40Q8BI79 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.27□□□□□ -2.45
Ccdc40Q8BI79 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.27□□□□□ -2.45
Ccdc40Q8BI79 Gm25895-201ENSMUST00000083714 100 ntBASIC-0.27□□□□□ -2.45
Ccdc40Q8BI79 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.28□□□□□ -2.45
Ccdc40Q8BI79 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.28□□□□□ -2.45
Ccdc40Q8BI79 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Mir672-201ENSMUST00000102331 100 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Gm12815-201ENSMUST00000121737 135 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 143 ms