Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
Clrn3Q8BHH8 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.27□□□□□ -2.45
Clrn3Q8BHH8 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.27□□□□□ -2.45
Clrn3Q8BHH8 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.27□□□□□ -2.45
Clrn3Q8BHH8 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.27□□□□□ -2.45
Clrn3Q8BHH8 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.27□□□□□ -2.45
Clrn3Q8BHH8 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.27□□□□□ -2.45
Clrn3Q8BHH8 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.28□□□□□ -2.45
Clrn3Q8BHH8 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.28□□□□□ -2.45
Clrn3Q8BHH8 Gm28211-201ENSMUST00000190920 315 ntBASIC-0.28□□□□□ -2.45
Clrn3Q8BHH8 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.28□□□□□ -2.45
Clrn3Q8BHH8 Mir191-201ENSMUST00000196210 74 ntBASIC-0.28□□□□□ -2.45
Clrn3Q8BHH8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
Clrn3Q8BHH8 Gm26447-201ENSMUST00000082448 129 ntBASIC-0.28□□□□□ -2.45
Clrn3Q8BHH8 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.28□□□□□ -2.45
Clrn3Q8BHH8 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 CT010505.1-201ENSMUST00000227026 396 ntBASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 Gm23406-201ENSMUST00000082537 122 ntBASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 Mir18-201ENSMUST00000083469 96 ntBASIC-0.29□□□□□ -2.46
Clrn3Q8BHH8 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.3□□□□□ -2.46
Clrn3Q8BHH8 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.31□□□□□ -2.46
Clrn3Q8BHH8 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.31□□□□□ -2.46
Clrn3Q8BHH8 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.32□□□□□ -2.46
Clrn3Q8BHH8 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.33□□□□□ -2.46
Clrn3Q8BHH8 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.33□□□□□ -2.46
Clrn3Q8BHH8 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.33□□□□□ -2.46
Clrn3Q8BHH8 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.33□□□□□ -2.46
Clrn3Q8BHH8 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.33□□□□□ -2.46
Clrn3Q8BHH8 Mir214-201ENSMUST00000083582 110 ntBASIC-0.33□□□□□ -2.46
Clrn3Q8BHH8 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.34□□□□□ -2.46
Clrn3Q8BHH8 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.35□□□□□ -2.47
Clrn3Q8BHH8 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.35□□□□□ -2.47
Clrn3Q8BHH8 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.35□□□□□ -2.47
Clrn3Q8BHH8 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.35□□□□□ -2.47
Clrn3Q8BHH8 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.35□□□□□ -2.47
Clrn3Q8BHH8 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.35□□□□□ -2.47
Clrn3Q8BHH8 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 Gm22080-201ENSMUST00000157591 106 ntBASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
Clrn3Q8BHH8 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Mir489-201ENSMUST00000093599 107 ntBASIC-0.37□□□□□ -2.47
Clrn3Q8BHH8 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.38□□□□□ -2.47
Clrn3Q8BHH8 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.38□□□□□ -2.47
Clrn3Q8BHH8 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
Clrn3Q8BHH8 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.38□□□□□ -2.47
Clrn3Q8BHH8 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.38□□□□□ -2.47
Clrn3Q8BHH8 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms