Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm22559-201ENSMUST00000157329 134 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm22233-201ENSMUST00000157464 114 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm25868-201ENSMUST00000158253 114 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm22129-201ENSMUST00000179034 107 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm23410-201ENSMUST00000179967 107 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm22756-201ENSMUST00000180118 107 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm44483-201ENSMUST00000197203 97 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm25797-201ENSMUST00000082640 107 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm24461-201ENSMUST00000082735 103 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm25851-201ENSMUST00000082794 107 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm22505-201ENSMUST00000082956 108 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm22363-201ENSMUST00000083100 108 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm23814-201ENSMUST00000083230 102 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm23095-201ENSMUST00000083446 107 ntBASIC1.25□□□□□ -2.21
Ubfd1Q78JW9 Gm23578-201ENSMUST00000103943 104 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Gm26011-201ENSMUST00000104410 104 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Gm12432-201ENSMUST00000119540 186 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Gm24238-201ENSMUST00000157792 98 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Mir1961-201ENSMUST00000158643 112 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Gm42795-201ENSMUST00000198847 76 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Gm44948-201ENSMUST00000209050 149 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Mir448-201ENSMUST00000083516 112 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Ubfd1Q78JW9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ubfd1Q78JW9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.23□□□□□ -2.21
Ubfd1Q78JW9 Gm14946-201ENSMUST00000119859 296 ntBASIC1.23□□□□□ -2.21
Ubfd1Q78JW9 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.23□□□□□ -2.21
Ubfd1Q78JW9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.23□□□□□ -2.21
Ubfd1Q78JW9 Gm25128-201ENSMUST00000083339 76 ntBASIC1.23□□□□□ -2.21
Ubfd1Q78JW9 Gm23245-201ENSMUST00000083370 135 ntBASIC1.23□□□□□ -2.21
Ubfd1Q78JW9 Gm25170-201ENSMUST00000104191 129 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Gm24509-201ENSMUST00000157086 101 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Gm25358-201ENSMUST00000157189 101 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Gm22074-201ENSMUST00000158595 113 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Mir7052-201ENSMUST00000184821 65 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Gm43898-201ENSMUST00000204456 424 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Gm23722-201ENSMUST00000083002 130 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Gm23509-201ENSMUST00000083080 160 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Mir324-201ENSMUST00000083600 89 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.22□□□□□ -2.21
Ubfd1Q78JW9 Gm23130-201ENSMUST00000104252 74 ntBASIC1.21□□□□□ -2.22
Ubfd1Q78JW9 Gm24141-201ENSMUST00000122776 115 ntBASIC1.21□□□□□ -2.22
Ubfd1Q78JW9 Gm23763-201ENSMUST00000158345 60 ntBASIC1.21□□□□□ -2.22
Ubfd1Q78JW9 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.21□□□□□ -2.22
Ubfd1Q78JW9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Ubfd1Q78JW9 Gm23504-201ENSMUST00000158988 95 ntBASIC1.2□□□□□ -2.22
Ubfd1Q78JW9 Gm20409-201ENSMUST00000173457 130 ntBASIC1.2□□□□□ -2.22
Ubfd1Q78JW9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.2□□□□□ -2.22
Ubfd1Q78JW9 Gm44470-201ENSMUST00000203913 142 ntBASIC1.2□□□□□ -2.22
Ubfd1Q78JW9 Gm25274-201ENSMUST00000104296 135 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Gm26301-201ENSMUST00000104813 95 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Gm25060-201ENSMUST00000157374 130 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Gm23838-201ENSMUST00000158067 162 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Gm16550-201ENSMUST00000162550 126 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Mir3094-201ENSMUST00000175121 64 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Gm44859-201ENSMUST00000207831 94 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Mir211-201ENSMUST00000083651 106 ntBASIC1.19□□□□□ -2.22
Ubfd1Q78JW9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Ubfd1Q78JW9 Gm24271-201ENSMUST00000102327 111 ntBASIC1.18□□□□□ -2.22
Ubfd1Q78JW9 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.18□□□□□ -2.22
Ubfd1Q78JW9 Gm22944-201ENSMUST00000158662 133 ntBASIC1.18□□□□□ -2.22
Ubfd1Q78JW9 Gm25976-201ENSMUST00000158695 130 ntBASIC1.18□□□□□ -2.22
Ubfd1Q78JW9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.18□□□□□ -2.22
Ubfd1Q78JW9 Gm27656-201ENSMUST00000185055 80 ntBASIC1.18□□□□□ -2.22
Ubfd1Q78JW9 Gm23678-201ENSMUST00000083157 107 ntBASIC1.18□□□□□ -2.22
Ubfd1Q78JW9 Mir709-201ENSMUST00000102190 88 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Gm25610-201ENSMUST00000104016 129 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Snord71-201ENSMUST00000104361 85 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Gm22515-201ENSMUST00000158273 305 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Gm25071-201ENSMUST00000175232 70 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Gm24311-201ENSMUST00000082570 104 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Snora41-201ENSMUST00000082668 132 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Gm23239-201ENSMUST00000083006 181 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.17□□□□□ -2.22
Ubfd1Q78JW9 Gm24865-201ENSMUST00000103246 96 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Gm23253-201ENSMUST00000157441 104 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Gm22349-201ENSMUST00000157864 107 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Gm24401-201ENSMUST00000157868 91 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Gm24221-201ENSMUST00000158833 313 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Gm26291-201ENSMUST00000158889 137 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Gm26337-201ENSMUST00000178000 79 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Gm44807-201ENSMUST00000206115 154 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 Mir532-201ENSMUST00000093630 96 ntBASIC1.16□□□□□ -2.22
Ubfd1Q78JW9 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.15□□□□□ -2.23
Ubfd1Q78JW9 Gm22966-201ENSMUST00000157957 129 ntBASIC1.15□□□□□ -2.23
Ubfd1Q78JW9 Gm23760-201ENSMUST00000158350 116 ntBASIC1.15□□□□□ -2.23
Ubfd1Q78JW9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms