Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 Gm26007-201ENSMUST00000158798 120 ntBASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.3□□□□□ -2.62
Topbp1Q6ZQF0 Mir759-201ENSMUST00000103254 98 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Gm23601-201ENSMUST00000157259 131 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Snora26-201ENSMUST00000175614 121 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Gm44392-201ENSMUST00000196758 115 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 AC192333.2-201ENSMUST00000224771 196 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Gm23614-201ENSMUST00000082598 107 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Gm24037-201ENSMUST00000082871 180 ntBASIC-1.31□□□□□ -2.62
Topbp1Q6ZQF0 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.32□□□□□ -2.62
Topbp1Q6ZQF0 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.32□□□□□ -2.62
Topbp1Q6ZQF0 Gm22166-201ENSMUST00000178419 121 ntBASIC-1.32□□□□□ -2.62
Topbp1Q6ZQF0 Gm23145-201ENSMUST00000178912 79 ntBASIC-1.32□□□□□ -2.62
Topbp1Q6ZQF0 Gm23288-201ENSMUST00000179213 121 ntBASIC-1.32□□□□□ -2.62
Topbp1Q6ZQF0 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.32□□□□□ -2.62
Topbp1Q6ZQF0 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.33□□□□□ -2.62
Topbp1Q6ZQF0 Gm25848-201ENSMUST00000116790 144 ntBASIC-1.33□□□□□ -2.62
Topbp1Q6ZQF0 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.33□□□□□ -2.62
Topbp1Q6ZQF0 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.33□□□□□ -2.62
Topbp1Q6ZQF0 Mir376a-201ENSMUST00000197584 68 ntBASIC-1.33□□□□□ -2.62
Topbp1Q6ZQF0 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.33□□□□□ -2.62
Topbp1Q6ZQF0 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.34□□□□□ -2.62
Topbp1Q6ZQF0 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.34□□□□□ -2.62
Topbp1Q6ZQF0 AC132437.1-201ENSMUST00000218308 320 ntBASIC-1.34□□□□□ -2.62
Topbp1Q6ZQF0 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-1.34□□□□□ -2.62
Topbp1Q6ZQF0 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.34□□□□□ -2.62
Topbp1Q6ZQF0 Gm24453-201ENSMUST00000083346 76 ntBASIC-1.34□□□□□ -2.62
Topbp1Q6ZQF0 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.35□□□□□ -2.62
Topbp1Q6ZQF0 Gm26495-201ENSMUST00000083152 137 ntBASIC-1.35□□□□□ -2.62
Topbp1Q6ZQF0 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.35□□□□□ -2.62
Topbp1Q6ZQF0 Gm24275-201ENSMUST00000116780 146 ntBASIC-1.35□□□□□ -2.63
Topbp1Q6ZQF0 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.35□□□□□ -2.63
Topbp1Q6ZQF0 Gm23016-201ENSMUST00000158431 62 ntBASIC-1.35□□□□□ -2.63
Topbp1Q6ZQF0 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.35□□□□□ -2.63
Topbp1Q6ZQF0 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
Topbp1Q6ZQF0 Gm44487-201ENSMUST00000205145 325 ntBASIC-1.35□□□□□ -2.63
Topbp1Q6ZQF0 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.35□□□□□ -2.63
Topbp1Q6ZQF0 AC102369.1-201ENSMUST00000218415 373 ntBASIC-1.35□□□□□ -2.63
Topbp1Q6ZQF0 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.36□□□□□ -2.63
Topbp1Q6ZQF0 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.36□□□□□ -2.63
Topbp1Q6ZQF0 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.36□□□□□ -2.63
Topbp1Q6ZQF0 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 Gm23448-201ENSMUST00000083151 104 ntBASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.37□□□□□ -2.63
Topbp1Q6ZQF0 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.38□□□□□ -2.63
Topbp1Q6ZQF0 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.38□□□□□ -2.63
Topbp1Q6ZQF0 Gm6293-201ENSMUST00000050339 195 ntBASIC-1.38□□□□□ -2.63
Topbp1Q6ZQF0 Snord67-201ENSMUST00000104033 111 ntBASIC-1.39□□□□□ -2.63
Topbp1Q6ZQF0 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.39□□□□□ -2.63
Topbp1Q6ZQF0 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.39□□□□□ -2.63
Topbp1Q6ZQF0 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.39□□□□□ -2.63
Topbp1Q6ZQF0 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm37763-201ENSMUST00000193445 120 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm26202-201ENSMUST00000082910 65 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm25579-201ENSMUST00000083407 106 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Gm25314-201ENSMUST00000178810 79 ntBASIC-1.4□□□□□ -2.63
Topbp1Q6ZQF0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm25507-201ENSMUST00000116981 144 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm14766-201ENSMUST00000121689 367 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm22598-201ENSMUST00000157600 127 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm24111-201ENSMUST00000175491 97 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm23660-201ENSMUST00000178362 79 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm24088-201ENSMUST00000179100 79 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm38268-201ENSMUST00000195813 193 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 AC121844.1-201ENSMUST00000218706 137 ntBASIC-1.41□□□□□ -2.64
Topbp1Q6ZQF0 Gm14574-201ENSMUST00000120644 279 ntBASIC-1.42□□□□□ -2.64
Topbp1Q6ZQF0 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.42□□□□□ -2.64
Topbp1Q6ZQF0 Gm23474-201ENSMUST00000158884 75 ntBASIC-1.42□□□□□ -2.64
Topbp1Q6ZQF0 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-1.42□□□□□ -2.64
Topbp1Q6ZQF0 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.42□□□□□ -2.64
Topbp1Q6ZQF0 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.42□□□□□ -2.64
Topbp1Q6ZQF0 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.43□□□□□ -2.64
Topbp1Q6ZQF0 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms