Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm44462-201ENSMUST00000199696 129 ntBASIC1.64□□□□□ -2.15
Ddx55Q6ZPL9 Gm45268-201ENSMUST00000210046 370 ntBASIC1.64□□□□□ -2.15
Ddx55Q6ZPL9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.64□□□□□ -2.15
Ddx55Q6ZPL9 Gm16186-201ENSMUST00000120132 216 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 Snora24-201ENSMUST00000174989 130 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 Mir3094-201ENSMUST00000175121 64 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 Gm28256-201ENSMUST00000188953 139 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 Gm28559-201ENSMUST00000190532 139 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 Gm23138-201ENSMUST00000083365 103 ntBASIC1.63□□□□□ -2.15
Ddx55Q6ZPL9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Gm24238-201ENSMUST00000157792 98 ntBASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Gm22914-201ENSMUST00000175195 77 ntBASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Gm25936-201ENSMUST00000179952 114 ntBASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Gm28862-201ENSMUST00000188246 163 ntBASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Gm25650-201ENSMUST00000083784 162 ntBASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.62□□□□□ -2.15
Ddx55Q6ZPL9 Mir547-201ENSMUST00000102051 78 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 Gm15289-201ENSMUST00000117793 244 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 Gm24262-201ENSMUST00000157431 144 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 Gm23044-201ENSMUST00000157891 100 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 Mir669j-201ENSMUST00000179023 121 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 Gm38298-201ENSMUST00000193578 118 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 mt-Tt-201ENSMUST00000082422 67 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 Gm24616-201ENSMUST00000083274 139 ntBASIC1.61□□□□□ -2.15
Ddx55Q6ZPL9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Ddx55Q6ZPL9 Gm25663-201ENSMUST00000157698 135 ntBASIC1.6□□□□□ -2.15
Ddx55Q6ZPL9 Gm22425-201ENSMUST00000158532 138 ntBASIC1.6□□□□□ -2.15
Ddx55Q6ZPL9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.6□□□□□ -2.15
Ddx55Q6ZPL9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Gm14923-201ENSMUST00000118270 155 ntBASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Mir7657-201ENSMUST00000196051 57 ntBASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Gm24494-201ENSMUST00000083804 81 ntBASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Ddx55Q6ZPL9 Mir653-201ENSMUST00000102402 85 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Gm25611-201ENSMUST00000104017 133 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Gm24605-201ENSMUST00000104772 96 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Gm22164-201ENSMUST00000158413 106 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Gm20409-201ENSMUST00000173457 130 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Gm44490-201ENSMUST00000198566 127 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.58□□□□□ -2.16
Ddx55Q6ZPL9 Gm22003-201ENSMUST00000101885 107 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm25367-201ENSMUST00000158846 106 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm22129-201ENSMUST00000179034 107 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm23410-201ENSMUST00000179967 107 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm22756-201ENSMUST00000180118 107 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm42795-201ENSMUST00000198847 76 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm22505-201ENSMUST00000082956 108 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm22363-201ENSMUST00000083100 108 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm23814-201ENSMUST00000083230 102 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm23095-201ENSMUST00000083446 107 ntBASIC1.57□□□□□ -2.16
Ddx55Q6ZPL9 Gm22785-201ENSMUST00000104087 132 ntBASIC1.56□□□□□ -2.16
Ddx55Q6ZPL9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.56□□□□□ -2.16
Ddx55Q6ZPL9 Gm25069-201ENSMUST00000175238 86 ntBASIC1.56□□□□□ -2.16
Ddx55Q6ZPL9 Mir6377-201ENSMUST00000183760 114 ntBASIC1.56□□□□□ -2.16
Ddx55Q6ZPL9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.56□□□□□ -2.16
Ddx55Q6ZPL9 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.56□□□□□ -2.16
Ddx55Q6ZPL9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.56□□□□□ -2.16
Ddx55Q6ZPL9 Gm25623-201ENSMUST00000157216 108 ntBASIC1.55□□□□□ -2.16
Ddx55Q6ZPL9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.55□□□□□ -2.16
Ddx55Q6ZPL9 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.55□□□□□ -2.16
Ddx55Q6ZPL9 Gm25610-201ENSMUST00000104016 129 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Gm16307-201ENSMUST00000161269 210 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Gm16550-201ENSMUST00000162550 126 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Gm27365-201ENSMUST00000184041 177 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Gm27656-201ENSMUST00000185055 80 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Snord96a-201ENSMUST00000082791 81 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Mir448-201ENSMUST00000083516 112 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC1.54□□□□□ -2.16
Ddx55Q6ZPL9 Gm22708-201ENSMUST00000158987 103 ntBASIC1.53□□□□□ -2.16
Ddx55Q6ZPL9 Gm44807-201ENSMUST00000206115 154 ntBASIC1.53□□□□□ -2.16
Ddx55Q6ZPL9 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.53□□□□□ -2.16
Ddx55Q6ZPL9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.52□□□□□ -2.17
Ddx55Q6ZPL9 Gm22963-201ENSMUST00000157960 91 ntBASIC1.52□□□□□ -2.17
Ddx55Q6ZPL9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.52□□□□□ -2.17
Ddx55Q6ZPL9 Gm24842-201ENSMUST00000158681 54 ntBASIC1.52□□□□□ -2.17
Ddx55Q6ZPL9 Gm23340-201ENSMUST00000158955 123 ntBASIC1.52□□□□□ -2.17
Ddx55Q6ZPL9 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.51□□□□□ -2.17
Ddx55Q6ZPL9 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.51□□□□□ -2.17
Ddx55Q6ZPL9 Gm26168-201ENSMUST00000083787 112 ntBASIC1.51□□□□□ -2.17
Ddx55Q6ZPL9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Ddx55Q6ZPL9 Gm25091-201ENSMUST00000103997 71 ntBASIC1.5□□□□□ -2.17
Ddx55Q6ZPL9 Gm22451-201ENSMUST00000122803 151 ntBASIC1.5□□□□□ -2.17
Ddx55Q6ZPL9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms