Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm23052-201ENSMUST00000178633 108 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm25729-201ENSMUST00000179050 108 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm25359-201ENSMUST00000179315 108 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm22624-201ENSMUST00000179913 108 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Gm27934-201ENSMUST00000158795 63 ntBASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Mir15a-201ENSMUST00000175266 84 ntBASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Mir3079-201ENSMUST00000175428 90 ntBASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Gm24020-201ENSMUST00000180156 108 ntBASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Gm37997-201ENSMUST00000193515 267 ntBASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Gm8508-201ENSMUST00000061226 363 ntBASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Snord32a-201ENSMUST00000083285 83 ntBASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 Mir488-201ENSMUST00000093595 109 ntBASIC0.99□□□□□ -2.25
Smarca1Q6PGB8 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.98□□□□□ -2.25
Smarca1Q6PGB8 Gm24509-201ENSMUST00000157086 101 ntBASIC0.98□□□□□ -2.25
Smarca1Q6PGB8 Gm25358-201ENSMUST00000157189 101 ntBASIC0.98□□□□□ -2.25
Smarca1Q6PGB8 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Smarca1Q6PGB8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.98□□□□□ -2.25
Smarca1Q6PGB8 Gm22576-201ENSMUST00000083733 104 ntBASIC0.98□□□□□ -2.25
Smarca1Q6PGB8 Gm43381-201ENSMUST00000198553 165 ntBASIC0.97□□□□□ -2.25
Smarca1Q6PGB8 Gm44922-201ENSMUST00000206690 90 ntBASIC0.97□□□□□ -2.25
Smarca1Q6PGB8 Gm25683-201ENSMUST00000083940 131 ntBASIC0.97□□□□□ -2.25
Smarca1Q6PGB8 Mir466h-201ENSMUST00000104748 81 ntBASIC0.96□□□□□ -2.26
Smarca1Q6PGB8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.96□□□□□ -2.26
Smarca1Q6PGB8 Mir695-201ENSMUST00000102261 109 ntBASIC0.95□□□□□ -2.26
Smarca1Q6PGB8 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.95□□□□□ -2.26
Smarca1Q6PGB8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.95□□□□□ -2.26
Smarca1Q6PGB8 Gm24457-201ENSMUST00000083196 105 ntBASIC0.95□□□□□ -2.26
Smarca1Q6PGB8 Mir411-201ENSMUST00000083543 82 ntBASIC0.95□□□□□ -2.26
Smarca1Q6PGB8 Gm25416-201ENSMUST00000104221 107 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Gm23763-201ENSMUST00000158345 60 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Gm24547-201ENSMUST00000158649 149 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Gm23008-201ENSMUST00000158946 80 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Gm27587-201ENSMUST00000185116 163 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Gm8219-201ENSMUST00000218309 242 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Mir500-201ENSMUST00000093600 92 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.94□□□□□ -2.26
Smarca1Q6PGB8 Gm25943-201ENSMUST00000103791 90 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Gm22079-201ENSMUST00000157592 106 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Gm25285-201ENSMUST00000178951 90 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Mir101a-201ENSMUST00000083517 83 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Mir532-201ENSMUST00000093630 96 ntBASIC0.93□□□□□ -2.26
Smarca1Q6PGB8 Gm23838-201ENSMUST00000158067 162 ntBASIC0.92□□□□□ -2.26
Smarca1Q6PGB8 Gm26403-201ENSMUST00000158500 105 ntBASIC0.92□□□□□ -2.26
Smarca1Q6PGB8 Mir6928-201ENSMUST00000185166 70 ntBASIC0.92□□□□□ -2.26
Smarca1Q6PGB8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.91□□□□□ -2.26
Smarca1Q6PGB8 Gm24232-201ENSMUST00000104314 132 ntBASIC0.91□□□□□ -2.26
Smarca1Q6PGB8 Mir1298-201ENSMUST00000116681 98 ntBASIC0.91□□□□□ -2.26
Smarca1Q6PGB8 Gm23864-201ENSMUST00000177607 107 ntBASIC0.91□□□□□ -2.26
Smarca1Q6PGB8 Gm38274-201ENSMUST00000195689 148 ntBASIC0.91□□□□□ -2.26
Smarca1Q6PGB8 Gm42623-201ENSMUST00000197225 379 ntBASIC0.91□□□□□ -2.26
Smarca1Q6PGB8 Gm24527-201ENSMUST00000082920 107 ntBASIC0.91□□□□□ -2.26
Smarca1Q6PGB8 Gm22689-201ENSMUST00000102452 110 ntBASIC0.9□□□□□ -2.27
Smarca1Q6PGB8 Gm25787-201ENSMUST00000104709 92 ntBASIC0.9□□□□□ -2.27
Smarca1Q6PGB8 Gm13577-201ENSMUST00000121365 205 ntBASIC0.9□□□□□ -2.27
Smarca1Q6PGB8 Gm24238-201ENSMUST00000157792 98 ntBASIC0.9□□□□□ -2.27
Smarca1Q6PGB8 Gm22332-201ENSMUST00000158072 126 ntBASIC0.9□□□□□ -2.27
Smarca1Q6PGB8 Gm16550-201ENSMUST00000162550 126 ntBASIC0.9□□□□□ -2.27
Smarca1Q6PGB8 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.9□□□□□ -2.27
Smarca1Q6PGB8 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm25110-201ENSMUST00000116684 121 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm25775-201ENSMUST00000116716 121 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm24795-201ENSMUST00000116737 121 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm25171-201ENSMUST00000116926 121 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm24728-201ENSMUST00000158226 125 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm26097-201ENSMUST00000179642 93 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm42795-201ENSMUST00000198847 76 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm44301-201ENSMUST00000200362 143 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.89□□□□□ -2.27
Smarca1Q6PGB8 Gm22348-201ENSMUST00000178674 79 ntBASIC0.88□□□□□ -2.27
Smarca1Q6PGB8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.88□□□□□ -2.27
Smarca1Q6PGB8 Mir7116-201ENSMUST00000195956 70 ntBASIC0.88□□□□□ -2.27
Smarca1Q6PGB8 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Smarca1Q6PGB8 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.88□□□□□ -2.27
Smarca1Q6PGB8 Mir362-201ENSMUST00000093592 65 ntBASIC0.88□□□□□ -2.27
Smarca1Q6PGB8 Gm24579-201ENSMUST00000103964 144 ntBASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Gm25316-201ENSMUST00000116826 118 ntBASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Gm14502-201ENSMUST00000118154 113 ntBASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Gm5002-201ENSMUST00000207145 223 ntBASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Snord47-201ENSMUST00000083034 77 ntBASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Mir30a-201ENSMUST00000083471 71 ntBASIC0.87□□□□□ -2.27
Smarca1Q6PGB8 Gm22544-201ENSMUST00000104349 127 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 Gm14039-201ENSMUST00000118705 101 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 Gm25544-201ENSMUST00000122676 120 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 Gm23853-201ENSMUST00000158375 104 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 Gm23859-201ENSMUST00000158383 64 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 Gm23209-201ENSMUST00000158667 110 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 Mir3109-201ENSMUST00000175301 88 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms