Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Snord35a-201ENSMUST00000083884 90 ntBASIC0.94□□□□□ -2.26
Snrnp40Q6PE01 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Snrnp40Q6PE01 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Gm23130-201ENSMUST00000104252 74 ntBASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Gm22373-201ENSMUST00000104584 89 ntBASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Gm22079-201ENSMUST00000157592 106 ntBASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Gm22485-201ENSMUST00000157990 109 ntBASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Gm16307-201ENSMUST00000161269 210 ntBASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Gm27365-201ENSMUST00000184041 177 ntBASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Gm24311-201ENSMUST00000082570 104 ntBASIC0.93□□□□□ -2.26
Snrnp40Q6PE01 Gm26420-201ENSMUST00000104273 103 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm26018-201ENSMUST00000104406 128 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm23320-201ENSMUST00000104462 127 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm24250-201ENSMUST00000157320 135 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm23770-201ENSMUST00000178009 108 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm22832-201ENSMUST00000178022 108 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm23863-201ENSMUST00000178265 108 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm24828-201ENSMUST00000178507 108 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm23052-201ENSMUST00000178633 108 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm25729-201ENSMUST00000179050 108 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm25359-201ENSMUST00000179315 108 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm22624-201ENSMUST00000179913 108 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm27699-201ENSMUST00000183553 180 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm27928-201ENSMUST00000183747 256 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Mir6377-201ENSMUST00000183760 114 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm44322-201ENSMUST00000196830 115 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Mir468-201ENSMUST00000197332 78 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm44976-201ENSMUST00000205543 261 ntBASIC0.92□□□□□ -2.26
Snrnp40Q6PE01 Gm14502-201ENSMUST00000118154 113 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm26089-201ENSMUST00000157898 107 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm27934-201ENSMUST00000158795 63 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm25364-201ENSMUST00000158851 107 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm26363-201ENSMUST00000158866 83 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm25166-201ENSMUST00000158909 111 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm22911-201ENSMUST00000177920 107 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm43749-201ENSMUST00000199345 352 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm18213-201ENSMUST00000207850 178 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Mir22-201ENSMUST00000083595 95 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Gm23947-201ENSMUST00000093636 107 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.91□□□□□ -2.26
Snrnp40Q6PE01 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Mir1904-201ENSMUST00000122702 80 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm22796-201ENSMUST00000157234 106 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm22967-201ENSMUST00000157956 239 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm22425-201ENSMUST00000158532 138 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm23375-201ENSMUST00000175407 83 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm27792-201ENSMUST00000184031 115 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm27419-201ENSMUST00000184576 109 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Mir6928-201ENSMUST00000185166 70 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm44338-201ENSMUST00000198614 110 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm23303-201ENSMUST00000082714 152 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Gm22809-201ENSMUST00000082743 156 ntBASIC0.9□□□□□ -2.27
Snrnp40Q6PE01 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Gm24232-201ENSMUST00000104314 132 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Gm44489-201ENSMUST00000104619 97 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Gm11644-201ENSMUST00000119735 150 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Gm22332-201ENSMUST00000158072 126 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Gm25901-201ENSMUST00000158494 130 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Mir1966-201ENSMUST00000158807 108 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Gm42533-201ENSMUST00000196247 157 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Gm44948-201ENSMUST00000209050 149 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Gm26123-201ENSMUST00000083363 135 ntBASIC0.89□□□□□ -2.27
Snrnp40Q6PE01 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm26011-201ENSMUST00000104410 104 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm25787-201ENSMUST00000104709 92 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm25980-201ENSMUST00000157176 218 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm24777-201ENSMUST00000157644 107 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm23859-201ENSMUST00000158383 64 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm27974-201ENSMUST00000183415 105 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm38274-201ENSMUST00000195689 148 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.88□□□□□ -2.27
Snrnp40Q6PE01 Gm25416-201ENSMUST00000104221 107 ntBASIC0.87□□□□□ -2.27
Snrnp40Q6PE01 Gm24747-201ENSMUST00000157835 87 ntBASIC0.87□□□□□ -2.27
Snrnp40Q6PE01 Gm23008-201ENSMUST00000158946 80 ntBASIC0.87□□□□□ -2.27
Snrnp40Q6PE01 Gm37545-201ENSMUST00000186512 148 ntBASIC0.87□□□□□ -2.27
Snrnp40Q6PE01 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Snrnp40Q6PE01 Gm42795-201ENSMUST00000198847 76 ntBASIC0.87□□□□□ -2.27
Snrnp40Q6PE01 Gm23445-201ENSMUST00000082800 107 ntBASIC0.87□□□□□ -2.27
Snrnp40Q6PE01 Gm25769-201ENSMUST00000158569 127 ntBASIC0.86□□□□□ -2.27
Snrnp40Q6PE01 Mir1961-201ENSMUST00000158643 112 ntBASIC0.86□□□□□ -2.27
Snrnp40Q6PE01 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.86□□□□□ -2.27
Snrnp40Q6PE01 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.86□□□□□ -2.27
Snrnp40Q6PE01 DQ267101-201ENSMUST00000082562 73 ntBASIC0.86□□□□□ -2.27
Snrnp40Q6PE01 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.86□□□□□ -2.27
Snrnp40Q6PE01 Snord61-201ENSMUST00000083176 71 ntBASIC0.86□□□□□ -2.27
Snrnp40Q6PE01 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.85□□□□□ -2.27
Snrnp40Q6PE01 Gm24431-201ENSMUST00000104073 66 ntBASIC0.85□□□□□ -2.27
Snrnp40Q6PE01 Gm22999-201ENSMUST00000157082 88 ntBASIC0.85□□□□□ -2.27
Snrnp40Q6PE01 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.85□□□□□ -2.27
Snrnp40Q6PE01 Gm18502-201ENSMUST00000218679 199 ntBASIC0.85□□□□□ -2.27
Snrnp40Q6PE01 Gm10172-201ENSMUST00000085929 558 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 144 ms