Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm24638-201ENSMUST00000179807 132 ntBASIC1.31□□□□□ -2.2
Ift88Q61371 Gm23651-201ENSMUST00000116755 120 ntBASIC1.3□□□□□ -2.2
Ift88Q61371 Gm26091-201ENSMUST00000122704 82 ntBASIC1.3□□□□□ -2.2
Ift88Q61371 Gm23253-201ENSMUST00000157441 104 ntBASIC1.3□□□□□ -2.2
Ift88Q61371 Gm23260-201ENSMUST00000158317 172 ntBASIC1.3□□□□□ -2.2
Ift88Q61371 Gm23763-201ENSMUST00000158345 60 ntBASIC1.3□□□□□ -2.2
Ift88Q61371 Gm22775-201ENSMUST00000177630 120 ntBASIC1.3□□□□□ -2.2
Ift88Q61371 Gm23569-201ENSMUST00000180120 120 ntBASIC1.3□□□□□ -2.2
Ift88Q61371 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.3□□□□□ -2.2
Ift88Q61371 Gm44948-201ENSMUST00000209050 149 ntBASIC1.3□□□□□ -2.2
Ift88Q61371 Gm24509-201ENSMUST00000157086 101 ntBASIC1.29□□□□□ -2.2
Ift88Q61371 Gm25358-201ENSMUST00000157189 101 ntBASIC1.29□□□□□ -2.2
Ift88Q61371 Gm24076-201ENSMUST00000158179 94 ntBASIC1.29□□□□□ -2.2
Ift88Q61371 Gm25851-201ENSMUST00000082794 107 ntBASIC1.29□□□□□ -2.2
Ift88Q61371 Gm22681-201ENSMUST00000083853 106 ntBASIC1.29□□□□□ -2.2
Ift88Q61371 Gm24449-201ENSMUST00000083985 106 ntBASIC1.29□□□□□ -2.2
Ift88Q61371 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Gm26089-201ENSMUST00000157898 107 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Gm26084-201ENSMUST00000157903 104 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Gm23838-201ENSMUST00000158067 162 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Mir1961-201ENSMUST00000158643 112 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Gm26363-201ENSMUST00000158866 83 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Mir7063-201ENSMUST00000184158 91 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.28□□□□□ -2.2
Ift88Q61371 Gm25820-201ENSMUST00000198589 127 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Mir3087-201ENSMUST00000199405 56 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Gm22297-201ENSMUST00000083312 106 ntBASIC1.28□□□□□ -2.2
Ift88Q61371 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Ift88Q61371 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ift88Q61371 Gm25428-201ENSMUST00000157608 114 ntBASIC1.27□□□□□ -2.21
Ift88Q61371 Gm44807-201ENSMUST00000206115 154 ntBASIC1.27□□□□□ -2.21
Ift88Q61371 Mir410-201ENSMUST00000083563 81 ntBASIC1.27□□□□□ -2.21
Ift88Q61371 Gm10351-201ENSMUST00000087694 125 ntBASIC1.27□□□□□ -2.21
Ift88Q61371 Mir532-201ENSMUST00000093630 96 ntBASIC1.27□□□□□ -2.21
Ift88Q61371 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Ift88Q61371 Gm23130-201ENSMUST00000104252 74 ntBASIC1.26□□□□□ -2.21
Ift88Q61371 Gm22233-201ENSMUST00000157464 114 ntBASIC1.26□□□□□ -2.21
Ift88Q61371 Gm25868-201ENSMUST00000158253 114 ntBASIC1.26□□□□□ -2.21
Ift88Q61371 Gm22663-201ENSMUST00000158721 102 ntBASIC1.26□□□□□ -2.21
Ift88Q61371 Gm23267-201ENSMUST00000178490 132 ntBASIC1.26□□□□□ -2.21
Ift88Q61371 Mir669j-201ENSMUST00000179023 121 ntBASIC1.26□□□□□ -2.21
Ift88Q61371 Gm27711-201ENSMUST00000183802 118 ntBASIC1.26□□□□□ -2.21
Ift88Q61371 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.25□□□□□ -2.21
Ift88Q61371 Gm25610-201ENSMUST00000104016 129 ntBASIC1.25□□□□□ -2.21
Ift88Q61371 Gm23336-201ENSMUST00000117023 123 ntBASIC1.25□□□□□ -2.21
Ift88Q61371 Gm14626-201ENSMUST00000117619 216 ntBASIC1.25□□□□□ -2.21
Ift88Q61371 Gm27668-201ENSMUST00000184188 120 ntBASIC1.25□□□□□ -2.21
Ift88Q61371 Gm44308-201ENSMUST00000197080 99 ntBASIC1.25□□□□□ -2.21
Ift88Q61371 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.25□□□□□ -2.21
Ift88Q61371 Gm10813-201ENSMUST00000099936 90 ntBASIC1.25□□□□□ -2.21
Ift88Q61371 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.25□□□□□ -2.21
Ift88Q61371 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Ift88Q61371 Gm25832-201ENSMUST00000104140 130 ntBASIC1.24□□□□□ -2.21
Ift88Q61371 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.24□□□□□ -2.21
Ift88Q61371 Gm24246-201ENSMUST00000157315 132 ntBASIC1.24□□□□□ -2.21
Ift88Q61371 Gm24718-201ENSMUST00000157521 136 ntBASIC1.24□□□□□ -2.21
Ift88Q61371 Gm16550-201ENSMUST00000162550 126 ntBASIC1.24□□□□□ -2.21
Ift88Q61371 Gm22887-201ENSMUST00000178586 107 ntBASIC1.24□□□□□ -2.21
Ift88Q61371 AC158982.2-201ENSMUST00000226283 184 ntBASIC1.24□□□□□ -2.21
Ift88Q61371 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Ift88Q61371 Mir1904-201ENSMUST00000122702 80 ntBASIC1.23□□□□□ -2.21
Ift88Q61371 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC1.23□□□□□ -2.21
Ift88Q61371 Gm22074-201ENSMUST00000158595 113 ntBASIC1.23□□□□□ -2.21
Ift88Q61371 Gm22129-201ENSMUST00000179034 107 ntBASIC1.23□□□□□ -2.21
Ift88Q61371 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.23□□□□□ -2.21
Ift88Q61371 Gm25128-201ENSMUST00000083339 76 ntBASIC1.23□□□□□ -2.21
Ift88Q61371 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.23□□□□□ -2.21
Ift88Q61371 Gm26080-201ENSMUST00000104069 131 ntBASIC1.22□□□□□ -2.21
Ift88Q61371 Gm22384-201ENSMUST00000158187 104 ntBASIC1.22□□□□□ -2.21
Ift88Q61371 Mir6369-201ENSMUST00000183772 106 ntBASIC1.22□□□□□ -2.21
Ift88Q61371 Gm27419-201ENSMUST00000184576 109 ntBASIC1.22□□□□□ -2.21
Ift88Q61371 Mir7657-201ENSMUST00000196051 57 ntBASIC1.22□□□□□ -2.21
Ift88Q61371 CT485607.2-201ENSMUST00000214650 91 ntBASIC1.22□□□□□ -2.21
Ift88Q61371 Gm16186-201ENSMUST00000120132 216 ntBASIC1.21□□□□□ -2.22
Ift88Q61371 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.21□□□□□ -2.22
Ift88Q61371 Gm15654-201ENSMUST00000152660 300 ntBASIC1.21□□□□□ -2.22
Ift88Q61371 Gm25425-201ENSMUST00000157611 96 ntBASIC1.21□□□□□ -2.22
Ift88Q61371 Gm23083-201ENSMUST00000157851 116 ntBASIC1.21□□□□□ -2.22
Ift88Q61371 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ift88Q61371 Gm25069-201ENSMUST00000175238 86 ntBASIC1.21□□□□□ -2.22
Ift88Q61371 Gm23245-201ENSMUST00000083370 135 ntBASIC1.21□□□□□ -2.22
Ift88Q61371 Mir324-201ENSMUST00000083600 89 ntBASIC1.21□□□□□ -2.22
Ift88Q61371 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Ift88Q61371 Gm24401-201ENSMUST00000157868 91 ntBASIC1.2□□□□□ -2.22
Ift88Q61371 Gm22801-201ENSMUST00000175624 84 ntBASIC1.2□□□□□ -2.22
Ift88Q61371 Gm24616-201ENSMUST00000083274 139 ntBASIC1.2□□□□□ -2.22
Ift88Q61371 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.2□□□□□ -2.22
Ift88Q61371 Mir709-201ENSMUST00000102190 88 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Gm24271-201ENSMUST00000102327 111 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Gm14039-201ENSMUST00000118705 101 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Gm22515-201ENSMUST00000158273 305 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Gm24676-201ENSMUST00000158758 75 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Gm23714-201ENSMUST00000179259 105 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Mir6381-201ENSMUST00000183426 87 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Gm24311-201ENSMUST00000082570 104 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Snora41-201ENSMUST00000082668 132 ntBASIC1.19□□□□□ -2.22
Ift88Q61371 Gm15289-201ENSMUST00000117793 244 ntBASIC1.18□□□□□ -2.22
Ift88Q61371 Gm22944-201ENSMUST00000158662 133 ntBASIC1.18□□□□□ -2.22
Ift88Q61371 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.18□□□□□ -2.22
Ift88Q61371 Gm25367-201ENSMUST00000158846 106 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms