Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm25895-201ENSMUST00000083714 100 ntBASIC0.29□□□□□ -2.36
Usf1Q61069 Mir541-201ENSMUST00000102097 90 ntBASIC0.28□□□□□ -2.36
Usf1Q61069 Gm23020-201ENSMUST00000158766 253 ntBASIC0.28□□□□□ -2.36
Usf1Q61069 Gm25397-201ENSMUST00000176951 92 ntBASIC0.28□□□□□ -2.36
Usf1Q61069 Mir7010-201ENSMUST00000183464 63 ntBASIC0.28□□□□□ -2.36
Usf1Q61069 Mir6390-201ENSMUST00000184405 129 ntBASIC0.28□□□□□ -2.36
Usf1Q61069 Gm44989-201ENSMUST00000204749 217 ntBASIC0.28□□□□□ -2.36
Usf1Q61069 Gm45541-201ENSMUST00000210443 54 ntBASIC0.28□□□□□ -2.36
Usf1Q61069 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.27□□□□□ -2.37
Usf1Q61069 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Usf1Q61069 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.27□□□□□ -2.37
Usf1Q61069 Gm19572-201ENSMUST00000214326 338 ntBASIC0.27□□□□□ -2.37
Usf1Q61069 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.27□□□□□ -2.37
Usf1Q61069 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Usf1Q61069 Gm22753-201ENSMUST00000083657 107 ntBASIC0.27□□□□□ -2.37
Usf1Q61069 Gm6897-201ENSMUST00000117714 138 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 Gm14758-201ENSMUST00000119104 138 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 Gm12686-201ENSMUST00000120546 397 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 Gm22706-201ENSMUST00000157907 112 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 Gm25444-201ENSMUST00000158999 113 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Usf1Q61069 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 Mir141-201ENSMUST00000083540 72 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 Gm24762-201ENSMUST00000083689 104 ntBASIC0.26□□□□□ -2.37
Usf1Q61069 Gm24121-201ENSMUST00000102029 106 ntBASIC0.25□□□□□ -2.37
Usf1Q61069 Snord19-201ENSMUST00000104609 76 ntBASIC0.25□□□□□ -2.37
Usf1Q61069 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.25□□□□□ -2.37
Usf1Q61069 Gm26152-201ENSMUST00000157427 101 ntBASIC0.25□□□□□ -2.37
Usf1Q61069 Gm25015-201ENSMUST00000158400 128 ntBASIC0.25□□□□□ -2.37
Usf1Q61069 Gm25364-201ENSMUST00000158851 107 ntBASIC0.25□□□□□ -2.37
Usf1Q61069 Gm3702-201ENSMUST00000211754 346 ntBASIC0.25□□□□□ -2.37
Usf1Q61069 Mir186-201ENSMUST00000083497 71 ntBASIC0.25□□□□□ -2.37
Usf1Q61069 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.24□□□□□ -2.37
Usf1Q61069 Gm26279-201ENSMUST00000157095 102 ntBASIC0.24□□□□□ -2.37
Usf1Q61069 Gm25769-201ENSMUST00000158569 127 ntBASIC0.24□□□□□ -2.37
Usf1Q61069 Gm23567-201ENSMUST00000178005 107 ntBASIC0.24□□□□□ -2.37
Usf1Q61069 Gm27475-201ENSMUST00000183420 61 ntBASIC0.24□□□□□ -2.37
Usf1Q61069 Mir7065-201ENSMUST00000185110 61 ntBASIC0.24□□□□□ -2.37
Usf1Q61069 Gm28767-201ENSMUST00000188601 114 ntBASIC0.24□□□□□ -2.37
Usf1Q61069 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.24□□□□□ -2.37
Usf1Q61069 Gm23047-201ENSMUST00000177661 94 ntBASIC0.23□□□□□ -2.37
Usf1Q61069 Gm27402-201ENSMUST00000183890 120 ntBASIC0.23□□□□□ -2.37
Usf1Q61069 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.23□□□□□ -2.37
Usf1Q61069 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.23□□□□□ -2.37
Usf1Q61069 Mir200a-201ENSMUST00000083466 90 ntBASIC0.23□□□□□ -2.37
Usf1Q61069 Gm24793-201ENSMUST00000104289 132 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm24250-201ENSMUST00000157320 135 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm22145-201ENSMUST00000157396 148 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm23892-201ENSMUST00000158105 130 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm16550-201ENSMUST00000162550 126 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm23770-201ENSMUST00000178009 108 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm22832-201ENSMUST00000178022 108 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm23863-201ENSMUST00000178265 108 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm24828-201ENSMUST00000178507 108 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm23052-201ENSMUST00000178633 108 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm25729-201ENSMUST00000179050 108 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm25359-201ENSMUST00000179315 108 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm22624-201ENSMUST00000179913 108 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm24488-201ENSMUST00000179934 127 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm25701-201ENSMUST00000179988 127 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm26431-201ENSMUST00000180199 127 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm37330-201ENSMUST00000192606 153 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm25588-201ENSMUST00000082501 140 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm22738-201ENSMUST00000083440 147 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 Gm22744-201ENSMUST00000083444 65 ntBASIC0.22□□□□□ -2.37
Usf1Q61069 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Usf1Q61069 Gm26420-201ENSMUST00000104273 103 ntBASIC0.21□□□□□ -2.38
Usf1Q61069 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.21□□□□□ -2.38
Usf1Q61069 Gm22239-201ENSMUST00000175220 103 ntBASIC0.21□□□□□ -2.38
Usf1Q61069 Mir100-201ENSMUST00000175270 80 ntBASIC0.21□□□□□ -2.38
Usf1Q61069 Gm27476-201ENSMUST00000183366 104 ntBASIC0.21□□□□□ -2.38
Usf1Q61069 Gm27993-201ENSMUST00000184362 85 ntBASIC0.21□□□□□ -2.38
Usf1Q61069 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.21□□□□□ -2.38
Usf1Q61069 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.21□□□□□ -2.38
Usf1Q61069 Gm23301-201ENSMUST00000082713 65 ntBASIC0.21□□□□□ -2.38
Usf1Q61069 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Usf1Q61069 Mir3089-201ENSMUST00000175350 84 ntBASIC0.2□□□□□ -2.38
Usf1Q61069 Mir411-201ENSMUST00000083543 82 ntBASIC0.2□□□□□ -2.38
Usf1Q61069 Gm23749-201ENSMUST00000104223 131 ntBASIC0.19□□□□□ -2.38
Usf1Q61069 Gm22850-201ENSMUST00000157714 82 ntBASIC0.19□□□□□ -2.38
Usf1Q61069 Gm24729-201ENSMUST00000158225 137 ntBASIC0.19□□□□□ -2.38
Usf1Q61069 Gm42795-201ENSMUST00000198847 76 ntBASIC0.19□□□□□ -2.38
Usf1Q61069 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Usf1Q61069 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.19□□□□□ -2.38
Usf1Q61069 Gm8508-201ENSMUST00000061226 363 ntBASIC0.19□□□□□ -2.38
Usf1Q61069 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Usf1Q61069 Gm24030-201ENSMUST00000083931 164 ntBASIC0.19□□□□□ -2.38
Usf1Q61069 Gm24276-201ENSMUST00000102181 110 ntBASIC0.18□□□□□ -2.38
Usf1Q61069 Gm11936-201ENSMUST00000118323 160 ntBASIC0.18□□□□□ -2.38
Usf1Q61069 Gm22790-201ENSMUST00000157229 129 ntBASIC0.18□□□□□ -2.38
Usf1Q61069 Gm23036-201ENSMUST00000157885 99 ntBASIC0.18□□□□□ -2.38
Usf1Q61069 Gm22101-201ENSMUST00000157928 103 ntBASIC0.18□□□□□ -2.38
Usf1Q61069 Gm22433-201ENSMUST00000158550 142 ntBASIC0.18□□□□□ -2.38
Usf1Q61069 Gm27717-201ENSMUST00000183933 151 ntBASIC0.18□□□□□ -2.38
Usf1Q61069 Gm44457-201ENSMUST00000198109 76 ntBASIC0.18□□□□□ -2.38
Usf1Q61069 Scarna9-201ENSMUST00000104318 70 ntBASIC0.17□□□□□ -2.38
Usf1Q61069 Gm14001-201ENSMUST00000118847 247 ntBASIC0.17□□□□□ -2.38
Usf1Q61069 Gm22557-201ENSMUST00000157804 102 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms