Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm28648-201ENSMUST00000190092 343 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 AC132437.1-201ENSMUST00000218308 320 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm24453-201ENSMUST00000083346 76 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.51□□□□□ -2.65
Trav3-1Q5R1I8 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.51□□□□□ -2.65
Trav3-1Q5R1I8 Gm38019-201ENSMUST00000195133 380 ntBASIC-1.51□□□□□ -2.65
Trav3-1Q5R1I8 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.51□□□□□ -2.65
Trav3-1Q5R1I8 Mir759-201ENSMUST00000103254 98 ntBASIC-1.52□□□□□ -2.65
Trav3-1Q5R1I8 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.52□□□□□ -2.65
Trav3-1Q5R1I8 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.52□□□□□ -2.65
Trav3-1Q5R1I8 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-1.52□□□□□ -2.65
Trav3-1Q5R1I8 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.52□□□□□ -2.65
Trav3-1Q5R1I8 Gm25186-201ENSMUST00000083909 108 ntBASIC-1.52□□□□□ -2.65
Trav3-1Q5R1I8 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
Trav3-1Q5R1I8 Gm26180-201ENSMUST00000179942 107 ntBASIC-1.53□□□□□ -2.65
Trav3-1Q5R1I8 Gm26495-201ENSMUST00000083152 137 ntBASIC-1.53□□□□□ -2.65
Trav3-1Q5R1I8 Mir141-201ENSMUST00000083540 72 ntBASIC-1.53□□□□□ -2.65
Trav3-1Q5R1I8 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.54□□□□□ -2.66
Trav3-1Q5R1I8 Gm22149-201ENSMUST00000104442 136 ntBASIC-1.54□□□□□ -2.66
Trav3-1Q5R1I8 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.54□□□□□ -2.66
Trav3-1Q5R1I8 Gm25586-201ENSMUST00000082499 112 ntBASIC-1.54□□□□□ -2.66
Trav3-1Q5R1I8 Gm24037-201ENSMUST00000082871 180 ntBASIC-1.54□□□□□ -2.66
Trav3-1Q5R1I8 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.54□□□□□ -2.66
Trav3-1Q5R1I8 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.55□□□□□ -2.66
Trav3-1Q5R1I8 Gm24296-201ENSMUST00000158297 106 ntBASIC-1.55□□□□□ -2.66
Trav3-1Q5R1I8 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.55□□□□□ -2.66
Trav3-1Q5R1I8 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.55□□□□□ -2.66
Trav3-1Q5R1I8 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.55□□□□□ -2.66
Trav3-1Q5R1I8 AC121844.1-201ENSMUST00000218706 137 ntBASIC-1.55□□□□□ -2.66
Trav3-1Q5R1I8 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.55□□□□□ -2.66
Trav3-1Q5R1I8 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.56□□□□□ -2.66
Trav3-1Q5R1I8 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.56□□□□□ -2.66
Trav3-1Q5R1I8 Mir7039-201ENSMUST00000183852 85 ntBASIC-1.56□□□□□ -2.66
Trav3-1Q5R1I8 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.56□□□□□ -2.66
Trav3-1Q5R1I8 Gm45402-201ENSMUST00000211796 223 ntBASIC-1.56□□□□□ -2.66
Trav3-1Q5R1I8 Snora19-201ENSMUST00000082962 132 ntBASIC-1.56□□□□□ -2.66
Trav3-1Q5R1I8 Gm23658-201ENSMUST00000083233 132 ntBASIC-1.56□□□□□ -2.66
Trav3-1Q5R1I8 Gm25579-201ENSMUST00000083407 106 ntBASIC-1.56□□□□□ -2.66
Trav3-1Q5R1I8 Gm25497-201ENSMUST00000104425 132 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm14574-201ENSMUST00000120644 279 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm25993-201ENSMUST00000175391 80 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm25314-201ENSMUST00000178810 79 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm7240-201ENSMUST00000220769 664 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm22455-201ENSMUST00000082580 71 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.57□□□□□ -2.66
Trav3-1Q5R1I8 Gm11834-201ENSMUST00000122257 585 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 Gm23474-201ENSMUST00000158884 75 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 Gm22169-201ENSMUST00000083229 107 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.58□□□□□ -2.66
Trav3-1Q5R1I8 Gm14766-201ENSMUST00000121689 367 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Gm23660-201ENSMUST00000178362 79 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Gm24088-201ENSMUST00000179100 79 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Gm44395-201ENSMUST00000197056 153 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Mir496a-201ENSMUST00000093627 79 ntBASIC-1.59□□□□□ -2.66
Trav3-1Q5R1I8 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.6□□□□□ -2.67
Trav3-1Q5R1I8 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.6□□□□□ -2.67
Trav3-1Q5R1I8 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.6□□□□□ -2.67
Trav3-1Q5R1I8 Gm44959-201ENSMUST00000209127 231 ntBASIC-1.6□□□□□ -2.67
Trav3-1Q5R1I8 AC102369.1-201ENSMUST00000218415 373 ntBASIC-1.6□□□□□ -2.67
Trav3-1Q5R1I8 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.6□□□□□ -2.67
Trav3-1Q5R1I8 Gm25337-201ENSMUST00000083723 104 ntBASIC-1.6□□□□□ -2.67
Trav3-1Q5R1I8 Gm24275-201ENSMUST00000116780 146 ntBASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm25848-201ENSMUST00000116790 144 ntBASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm25055-201ENSMUST00000157369 76 ntBASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Gm23448-201ENSMUST00000083151 104 ntBASIC-1.61□□□□□ -2.67
Trav3-1Q5R1I8 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
Trav3-1Q5R1I8 Mir574-201ENSMUST00000103854 78 ntBASIC-1.62□□□□□ -2.67
Trav3-1Q5R1I8 Gm22720-201ENSMUST00000122710 87 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 164 ms