Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm26360-201ENSMUST00000158872 103 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Gm22887-201ENSMUST00000178586 107 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Gm44211-201ENSMUST00000204867 145 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.49□□□□□ -2.33
Usp28Q5I043 Mir10b-201ENSMUST00000083566 68 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Gm26420-201ENSMUST00000104273 103 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm14837-201ENSMUST00000119688 206 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm6272-201ENSMUST00000121256 171 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm22557-201ENSMUST00000157804 102 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm23853-201ENSMUST00000158375 104 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm16546-201ENSMUST00000159442 355 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm23416-201ENSMUST00000175520 95 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm26426-201ENSMUST00000177866 123 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm26060-201ENSMUST00000180094 123 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm42795-201ENSMUST00000198847 76 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.48□□□□□ -2.33
Usp28Q5I043 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm24342-201ENSMUST00000103907 104 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm23672-201ENSMUST00000157471 107 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm22612-201ENSMUST00000158293 101 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm24547-201ENSMUST00000158649 149 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm25364-201ENSMUST00000158851 107 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Mir6390-201ENSMUST00000184405 129 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm8219-201ENSMUST00000218309 242 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Mir30a-201ENSMUST00000083471 71 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm24258-201ENSMUST00000083739 133 ntBASIC0.47□□□□□ -2.33
Usp28Q5I043 Gm22332-201ENSMUST00000158072 126 ntBASIC0.46□□□□□ -2.34
Usp28Q5I043 Gm25769-201ENSMUST00000158569 127 ntBASIC0.46□□□□□ -2.34
Usp28Q5I043 Gm37997-201ENSMUST00000193515 267 ntBASIC0.46□□□□□ -2.34
Usp28Q5I043 Gm45002-201ENSMUST00000208045 120 ntBASIC0.46□□□□□ -2.34
Usp28Q5I043 Snord69-201ENSMUST00000104024 80 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Gm22079-201ENSMUST00000157592 106 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Gm24549-201ENSMUST00000158647 139 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Gm26092-201ENSMUST00000179798 97 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Mir669a-1-201ENSMUST00000180238 97 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Mir6928-201ENSMUST00000185166 70 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Gm37116-201ENSMUST00000195161 147 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Usp28Q5I043 Mir721-201ENSMUST00000200230 88 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Mir411-201ENSMUST00000083543 82 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Mir200b-201ENSMUST00000083615 70 ntBASIC0.45□□□□□ -2.34
Usp28Q5I043 Scarna9-201ENSMUST00000104318 70 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm22148-201ENSMUST00000104445 107 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm24640-201ENSMUST00000116949 126 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm22626-201ENSMUST00000116990 126 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm24476-201ENSMUST00000157437 131 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm22815-201ENSMUST00000157451 62 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm24728-201ENSMUST00000158226 125 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm22476-201ENSMUST00000158902 100 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm22466-201ENSMUST00000175278 69 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm24761-201ENSMUST00000179589 127 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm24488-201ENSMUST00000179934 127 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm25701-201ENSMUST00000179988 127 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm26431-201ENSMUST00000180199 127 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm43944-201ENSMUST00000205220 120 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.44□□□□□ -2.34
Usp28Q5I043 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Mir302d-201ENSMUST00000083513 66 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm22753-201ENSMUST00000083657 107 ntBASIC0.44□□□□□ -2.34
Usp28Q5I043 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Gm25985-201ENSMUST00000122677 107 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Gm26484-201ENSMUST00000158018 106 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Gm25444-201ENSMUST00000158999 113 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Gm24575-201ENSMUST00000175502 77 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Mir6369-201ENSMUST00000183772 106 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Gm27285-201ENSMUST00000183875 127 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Gm8508-201ENSMUST00000061226 363 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 mt-Td-201ENSMUST00000082404 70 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Gm24030-201ENSMUST00000083931 164 ntBASIC0.43□□□□□ -2.34
Usp28Q5I043 Gm23060-201ENSMUST00000102345 109 ntBASIC0.42□□□□□ -2.34
Usp28Q5I043 Gm25496-201ENSMUST00000104430 120 ntBASIC0.42□□□□□ -2.34
Usp28Q5I043 Gm14884-201ENSMUST00000120456 196 ntBASIC0.42□□□□□ -2.34
Usp28Q5I043 Gm22522-201ENSMUST00000158271 151 ntBASIC0.42□□□□□ -2.34
Usp28Q5I043 Gm23008-201ENSMUST00000158946 80 ntBASIC0.42□□□□□ -2.34
Usp28Q5I043 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.42□□□□□ -2.34
Usp28Q5I043 Gm23969-201ENSMUST00000083324 74 ntBASIC0.42□□□□□ -2.34
Usp28Q5I043 Mir201-201ENSMUST00000083470 66 ntBASIC0.42□□□□□ -2.34
Usp28Q5I043 Gm14039-201ENSMUST00000118705 101 ntBASIC0.41□□□□□ -2.34
Usp28Q5I043 Gm14946-201ENSMUST00000119859 296 ntBASIC0.41□□□□□ -2.34
Usp28Q5I043 Gm6985-201ENSMUST00000121255 271 ntBASIC0.41□□□□□ -2.34
Usp28Q5I043 Gm13577-201ENSMUST00000121365 205 ntBASIC0.41□□□□□ -2.34
Usp28Q5I043 Gm37586-201ENSMUST00000193654 204 ntBASIC0.41□□□□□ -2.34
Usp28Q5I043 Gm23423-201ENSMUST00000082782 106 ntBASIC0.41□□□□□ -2.34
Usp28Q5I043 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Usp28Q5I043 Gm24835-201ENSMUST00000116777 111 ntBASIC0.4□□□□□ -2.35
Usp28Q5I043 Gm15289-201ENSMUST00000117793 244 ntBASIC0.4□□□□□ -2.35
Usp28Q5I043 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.4□□□□□ -2.35
Usp28Q5I043 Gm22259-201ENSMUST00000178926 107 ntBASIC0.4□□□□□ -2.35
Usp28Q5I043 Gm24527-201ENSMUST00000082920 107 ntBASIC0.4□□□□□ -2.35
Usp28Q5I043 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Usp28Q5I043 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Usp28Q5I043 Gm23321-201ENSMUST00000104465 126 ntBASIC0.39□□□□□ -2.35
Usp28Q5I043 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.39□□□□□ -2.35
Usp28Q5I043 Gm23080-201ENSMUST00000157846 103 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 137.7 ms