Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm27510-201ENSMUST00000158214 64 ntBASIC-2.44□□□□□ -2.8
Ccdc88bQ4QRL3 Gm25653-201ENSMUST00000158473 138 ntBASIC-2.44□□□□□ -2.8
Ccdc88bQ4QRL3 Gm25284-201ENSMUST00000180345 141 ntBASIC-2.44□□□□□ -2.8
Ccdc88bQ4QRL3 Gm42795-201ENSMUST00000198847 76 ntBASIC-2.44□□□□□ -2.8
Ccdc88bQ4QRL3 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Gm22248-201ENSMUST00000082482 150 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Gm25410-201ENSMUST00000083758 137 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Gm25538-201ENSMUST00000101943 107 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Gm15069-201ENSMUST00000117792 192 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Gm15068-201ENSMUST00000119796 192 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Gm24440-201ENSMUST00000157236 63 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Gm24512-201ENSMUST00000174963 65 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Gm29512-201ENSMUST00000185544 315 ntBASIC-2.45□□□□□ -2.8
Ccdc88bQ4QRL3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC-2.46□□□□□ -2.8
Ccdc88bQ4QRL3 Gm24913-201ENSMUST00000157286 107 ntBASIC-2.46□□□□□ -2.8
Ccdc88bQ4QRL3 Gm24223-201ENSMUST00000158827 90 ntBASIC-2.46□□□□□ -2.8
Ccdc88bQ4QRL3 Gm25121-201ENSMUST00000179846 79 ntBASIC-2.46□□□□□ -2.8
Ccdc88bQ4QRL3 Trav5-2-201ENSMUST00000199855 280 ntBASIC-2.46□□□□□ -2.8
Ccdc88bQ4QRL3 Gm43907-201ENSMUST00000203128 117 ntBASIC-2.46□□□□□ -2.8
Ccdc88bQ4QRL3 Gm25629-201ENSMUST00000084001 107 ntBASIC-2.46□□□□□ -2.8
Ccdc88bQ4QRL3 Gm25317-201ENSMUST00000116824 129 ntBASIC-2.47□□□□□ -2.81
Ccdc88bQ4QRL3 Gm25056-201ENSMUST00000157372 62 ntBASIC-2.47□□□□□ -2.81
Ccdc88bQ4QRL3 Gm14599-201ENSMUST00000120469 474 ntBASIC-2.48□□□□□ -2.81
Ccdc88bQ4QRL3 Gm24238-201ENSMUST00000157792 98 ntBASIC-2.48□□□□□ -2.81
Ccdc88bQ4QRL3 Gm24400-201ENSMUST00000157865 107 ntBASIC-2.48□□□□□ -2.81
Ccdc88bQ4QRL3 Gm22606-201ENSMUST00000158290 103 ntBASIC-2.48□□□□□ -2.81
Ccdc88bQ4QRL3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-2.48□□□□□ -2.81
Ccdc88bQ4QRL3 Gm22287-201ENSMUST00000083197 107 ntBASIC-2.48□□□□□ -2.81
Ccdc88bQ4QRL3 Gm14533-201ENSMUST00000117088 93 ntBASIC-2.49□□□□□ -2.81
Ccdc88bQ4QRL3 Gm26478-201ENSMUST00000122611 133 ntBASIC-2.49□□□□□ -2.81
Ccdc88bQ4QRL3 Gm23900-201ENSMUST00000157569 108 ntBASIC-2.49□□□□□ -2.81
Ccdc88bQ4QRL3 Gm22335-201ENSMUST00000157724 99 ntBASIC-2.49□□□□□ -2.81
Ccdc88bQ4QRL3 Gm24847-201ENSMUST00000158032 108 ntBASIC-2.49□□□□□ -2.81
Ccdc88bQ4QRL3 Mir195b-201ENSMUST00000184814 97 ntBASIC-2.49□□□□□ -2.81
Ccdc88bQ4QRL3 AC153526.1-201ENSMUST00000219750 190 ntBASIC-2.49□□□□□ -2.81
Ccdc88bQ4QRL3 Mir335-201ENSMUST00000083567 98 ntBASIC-2.49□□□□□ -2.81
Ccdc88bQ4QRL3 Gm22539-201ENSMUST00000158167 117 ntBASIC-2.5□□□□□ -2.81
Ccdc88bQ4QRL3 Gm24799-201ENSMUST00000178431 79 ntBASIC-2.5□□□□□ -2.81
Ccdc88bQ4QRL3 Gm42164-201ENSMUST00000198881 379 ntBASIC-2.5□□□□□ -2.81
Ccdc88bQ4QRL3 Gm26066-201ENSMUST00000083385 109 ntBASIC-2.5□□□□□ -2.81
Ccdc88bQ4QRL3 Gm24232-201ENSMUST00000104314 132 ntBASIC-2.51□□□□□ -2.81
Ccdc88bQ4QRL3 Gm22883-201ENSMUST00000157376 106 ntBASIC-2.51□□□□□ -2.81
Ccdc88bQ4QRL3 Atp2b4-208ENSMUST00000167348 243 ntBASIC-2.51□□□□□ -2.81
Ccdc88bQ4QRL3 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-2.51□□□□□ -2.81
Ccdc88bQ4QRL3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-2.51□□□□□ -2.81
Ccdc88bQ4QRL3 Gm25142-201ENSMUST00000082698 107 ntBASIC-2.51□□□□□ -2.81
Ccdc88bQ4QRL3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-2.51□□□□□ -2.81
Ccdc88bQ4QRL3 Gm22321-201ENSMUST00000157152 104 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Mir6411-201ENSMUST00000183556 108 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Gm38261-201ENSMUST00000192608 316 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Gm45543-201ENSMUST00000209327 88 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Mir122-201ENSMUST00000083468 66 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Gm25875-201ENSMUST00000104323 107 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Gm23655-201ENSMUST00000122627 105 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Gm24051-201ENSMUST00000158622 75 ntBASIC-2.52□□□□□ -2.81
Ccdc88bQ4QRL3 Gm11834-201ENSMUST00000122257 585 ntBASIC-2.53□□□□□ -2.81
Ccdc88bQ4QRL3 Gm24854-201ENSMUST00000158025 98 ntBASIC-2.53□□□□□ -2.81
Ccdc88bQ4QRL3 Mir669h-201ENSMUST00000116944 125 ntBASIC-2.54□□□□□ -2.82
Ccdc88bQ4QRL3 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.54□□□□□ -2.82
Ccdc88bQ4QRL3 Gm27784-201ENSMUST00000184926 113 ntBASIC-2.54□□□□□ -2.82
Ccdc88bQ4QRL3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-2.54□□□□□ -2.82
Ccdc88bQ4QRL3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-2.54□□□□□ -2.82
Ccdc88bQ4QRL3 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-2.54□□□□□ -2.82
Ccdc88bQ4QRL3 Gm13720-201ENSMUST00000120741 196 ntBASIC-2.55□□□□□ -2.82
Ccdc88bQ4QRL3 Gm26369-201ENSMUST00000157825 100 ntBASIC-2.55□□□□□ -2.82
Ccdc88bQ4QRL3 Gm38050-201ENSMUST00000191904 238 ntBASIC-2.55□□□□□ -2.82
Ccdc88bQ4QRL3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-2.56□□□□□ -2.82
Ccdc88bQ4QRL3 Gm25329-201ENSMUST00000158041 126 ntBASIC-2.56□□□□□ -2.82
Ccdc88bQ4QRL3 Gm22433-201ENSMUST00000158550 142 ntBASIC-2.56□□□□□ -2.82
Ccdc88bQ4QRL3 Gm17919-201ENSMUST00000173344 312 ntBASIC-2.56□□□□□ -2.82
Ccdc88bQ4QRL3 AC164297.3-201ENSMUST00000224238 94 ntBASIC-2.56□□□□□ -2.82
Ccdc88bQ4QRL3 Gm25493-201ENSMUST00000157375 103 ntBASIC-2.57□□□□□ -2.82
Ccdc88bQ4QRL3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-2.57□□□□□ -2.82
Ccdc88bQ4QRL3 Gm24518-201ENSMUST00000180275 94 ntBASIC-2.57□□□□□ -2.82
Ccdc88bQ4QRL3 Gm27672-201ENSMUST00000183751 204 ntBASIC-2.57□□□□□ -2.82
Ccdc88bQ4QRL3 Gm27624-201ENSMUST00000185047 177 ntBASIC-2.57□□□□□ -2.82
Ccdc88bQ4QRL3 AC155712.1-201ENSMUST00000219704 160 ntBASIC-2.57□□□□□ -2.82
Ccdc88bQ4QRL3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-2.57□□□□□ -2.82
Ccdc88bQ4QRL3 Gm2768-201ENSMUST00000121062 250 ntBASIC-2.58□□□□□ -2.82
Ccdc88bQ4QRL3 Gm44990-201ENSMUST00000203922 217 ntBASIC-2.58□□□□□ -2.82
Ccdc88bQ4QRL3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-2.58□□□□□ -2.82
Ccdc88bQ4QRL3 Gm25664-201ENSMUST00000157697 107 ntBASIC-2.58□□□□□ -2.82
Ccdc88bQ4QRL3 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.58□□□□□ -2.82
Ccdc88bQ4QRL3 Gm23845-201ENSMUST00000083834 152 ntBASIC-2.58□□□□□ -2.82
Ccdc88bQ4QRL3 Gm24962-201ENSMUST00000157917 109 ntBASIC-2.59□□□□□ -2.82
Ccdc88bQ4QRL3 Gm25873-201ENSMUST00000180317 107 ntBASIC-2.59□□□□□ -2.82
Ccdc88bQ4QRL3 Mir7657-201ENSMUST00000196051 57 ntBASIC-2.59□□□□□ -2.82
Ccdc88bQ4QRL3 Mir691-201ENSMUST00000199719 78 ntBASIC-2.59□□□□□ -2.82
Ccdc88bQ4QRL3 Gm11694-201ENSMUST00000118637 159 ntBASIC-2.6□□□□□ -2.83
Ccdc88bQ4QRL3 AC122327.1-201ENSMUST00000220778 108 ntBASIC-2.6□□□□□ -2.83
Ccdc88bQ4QRL3 Gm25078-201ENSMUST00000082530 107 ntBASIC-2.6□□□□□ -2.83
Ccdc88bQ4QRL3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-2.6□□□□□ -2.83
Ccdc88bQ4QRL3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC-2.6□□□□□ -2.83
Ccdc88bQ4QRL3 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-2.61□□□□□ -2.83
Ccdc88bQ4QRL3 Gm14301-201ENSMUST00000120181 324 ntBASIC-2.61□□□□□ -2.83
Ccdc88bQ4QRL3 Gm25870-201ENSMUST00000179845 79 ntBASIC-2.61□□□□□ -2.83
Ccdc88bQ4QRL3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-2.61□□□□□ -2.83
Ccdc88bQ4QRL3 Gm18242-201ENSMUST00000218455 542 ntBASIC-2.61□□□□□ -2.83
Retrieved 100 of 76,532 protein–RNA pairs in 376 ms