Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm42533-201ENSMUST00000196247 157 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm44922-201ENSMUST00000206690 90 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm26225-201ENSMUST00000082508 135 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm25410-201ENSMUST00000083758 137 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm26420-201ENSMUST00000104273 103 ntBASIC0.74□□□□□ -2.29
Trafd1Q3UDK1 Gm26403-201ENSMUST00000158500 105 ntBASIC0.74□□□□□ -2.29
Trafd1Q3UDK1 Gm25166-201ENSMUST00000158909 111 ntBASIC0.74□□□□□ -2.29
Trafd1Q3UDK1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.74□□□□□ -2.29
Trafd1Q3UDK1 Mir219b-201ENSMUST00000198317 65 ntBASIC0.74□□□□□ -2.29
Trafd1Q3UDK1 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.74□□□□□ -2.29
Trafd1Q3UDK1 Mir201-201ENSMUST00000083470 66 ntBASIC0.74□□□□□ -2.29
Trafd1Q3UDK1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Trafd1Q3UDK1 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.73□□□□□ -2.29
Trafd1Q3UDK1 Gm24579-201ENSMUST00000103964 144 ntBASIC0.73□□□□□ -2.29
Trafd1Q3UDK1 Gm22469-201ENSMUST00000104118 133 ntBASIC0.73□□□□□ -2.29
Trafd1Q3UDK1 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.73□□□□□ -2.29
Trafd1Q3UDK1 Gm23080-201ENSMUST00000157846 103 ntBASIC0.73□□□□□ -2.29
Trafd1Q3UDK1 Gm22989-201ENSMUST00000158313 86 ntBASIC0.73□□□□□ -2.29
Trafd1Q3UDK1 Gm20386-201ENSMUST00000174010 132 ntBASIC0.73□□□□□ -2.29
Trafd1Q3UDK1 Gm23347-201ENSMUST00000083823 82 ntBASIC0.73□□□□□ -2.29
Trafd1Q3UDK1 Mir1298-201ENSMUST00000116681 98 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Gm25968-201ENSMUST00000157167 100 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Gm22332-201ENSMUST00000158072 126 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Gm25769-201ENSMUST00000158569 127 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Gm25241-201ENSMUST00000174909 84 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Gm26217-201ENSMUST00000175212 84 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Gm22348-201ENSMUST00000178674 79 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Mir6928-201ENSMUST00000185166 70 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Gm44462-201ENSMUST00000199696 129 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Mir532-201ENSMUST00000093630 96 ntBASIC0.72□□□□□ -2.29
Trafd1Q3UDK1 Gm24271-201ENSMUST00000102327 111 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm25611-201ENSMUST00000104017 133 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm22544-201ENSMUST00000104349 127 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm24509-201ENSMUST00000157086 101 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm25358-201ENSMUST00000157189 101 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm22337-201ENSMUST00000157721 132 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm25364-201ENSMUST00000158851 107 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm16546-201ENSMUST00000159442 355 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm17020-201ENSMUST00000172274 274 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm38113-201ENSMUST00000193704 201 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm42795-201ENSMUST00000198847 76 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm8508-201ENSMUST00000061226 363 ntBASIC0.71□□□□□ -2.3
Trafd1Q3UDK1 Gm24374-201ENSMUST00000104394 106 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Gm22079-201ENSMUST00000157592 106 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Mir3109-201ENSMUST00000175301 88 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Gm22801-201ENSMUST00000175624 84 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Snord47-201ENSMUST00000083034 77 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Gm24616-201ENSMUST00000083274 139 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Gm26123-201ENSMUST00000083363 135 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Mir489-201ENSMUST00000093599 107 ntBASIC0.7□□□□□ -2.3
Trafd1Q3UDK1 Gm25544-201ENSMUST00000122676 120 ntBASIC0.69□□□□□ -2.3
Trafd1Q3UDK1 Gm24131-201ENSMUST00000158539 107 ntBASIC0.69□□□□□ -2.3
Trafd1Q3UDK1 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.69□□□□□ -2.3
Trafd1Q3UDK1 Mir411-201ENSMUST00000083543 82 ntBASIC0.69□□□□□ -2.3
Trafd1Q3UDK1 Gm22796-201ENSMUST00000157234 106 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Gm23838-201ENSMUST00000158067 162 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Gm26358-201ENSMUST00000158215 97 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Gm22606-201ENSMUST00000158290 103 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Gm27934-201ENSMUST00000158795 63 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Gm26097-201ENSMUST00000179642 93 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Gm23140-201ENSMUST00000082487 107 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Snord32a-201ENSMUST00000083285 83 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Mir324-201ENSMUST00000083600 89 ntBASIC0.68□□□□□ -2.3
Trafd1Q3UDK1 Gm23321-201ENSMUST00000104465 126 ntBASIC0.67□□□□□ -2.3
Trafd1Q3UDK1 Gm22999-201ENSMUST00000157082 88 ntBASIC0.67□□□□□ -2.3
Trafd1Q3UDK1 Gm37997-201ENSMUST00000193515 267 ntBASIC0.67□□□□□ -2.3
Trafd1Q3UDK1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.67□□□□□ -2.3
Trafd1Q3UDK1 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.67□□□□□ -2.3
Trafd1Q3UDK1 Mir709-201ENSMUST00000102190 88 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm25110-201ENSMUST00000116684 121 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm25775-201ENSMUST00000116716 121 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm24795-201ENSMUST00000116737 121 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm25171-201ENSMUST00000116926 121 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm14502-201ENSMUST00000118154 113 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm22967-201ENSMUST00000157956 239 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm23859-201ENSMUST00000158383 64 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm24054-201ENSMUST00000158619 105 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm24323-201ENSMUST00000175342 77 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Mir3079-201ENSMUST00000175428 90 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm22887-201ENSMUST00000178586 107 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm27792-201ENSMUST00000184031 115 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 AL929417.1-201ENSMUST00000214901 124 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm24920-201ENSMUST00000083018 85 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Gm25136-201ENSMUST00000083253 115 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.66□□□□□ -2.3
Trafd1Q3UDK1 Mir695-201ENSMUST00000102261 109 ntBASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Gm22786-201ENSMUST00000104086 122 ntBASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Gm23990-201ENSMUST00000117031 117 ntBASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Mir15a-201ENSMUST00000175266 84 ntBASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Mir6369-201ENSMUST00000183772 106 ntBASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Gm44338-201ENSMUST00000198614 110 ntBASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Gm5002-201ENSMUST00000207145 223 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms