Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm25035-201ENSMUST00000175414 77 ntBASIC1.91□□□□□ -2.1
Ddb1Q3U1J4 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.91□□□□□ -2.1
Ddb1Q3U1J4 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.91□□□□□ -2.1
Ddb1Q3U1J4 Mir489-201ENSMUST00000093599 107 ntBASIC1.91□□□□□ -2.1
Ddb1Q3U1J4 Mir223-201ENSMUST00000102112 110 ntBASIC1.9□□□□□ -2.11
Ddb1Q3U1J4 Gm22079-201ENSMUST00000157592 106 ntBASIC1.9□□□□□ -2.11
Ddb1Q3U1J4 Gm42844-201ENSMUST00000200355 112 ntBASIC1.9□□□□□ -2.11
Ddb1Q3U1J4 Gm42506-201ENSMUST00000202009 150 ntBASIC1.9□□□□□ -2.11
Ddb1Q3U1J4 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.9□□□□□ -2.11
Ddb1Q3U1J4 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.9□□□□□ -2.11
Ddb1Q3U1J4 Gm12086-201ENSMUST00000120863 228 ntBASIC1.89□□□□□ -2.11
Ddb1Q3U1J4 Gm22213-201ENSMUST00000157564 119 ntBASIC1.89□□□□□ -2.11
Ddb1Q3U1J4 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.89□□□□□ -2.11
Ddb1Q3U1J4 Mir6985-201ENSMUST00000184641 61 ntBASIC1.89□□□□□ -2.11
Ddb1Q3U1J4 Gm26420-201ENSMUST00000104273 103 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 Gm24234-201ENSMUST00000104316 107 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 Snord71-201ENSMUST00000104361 85 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 Gm24174-201ENSMUST00000158933 111 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 Mir3094-201ENSMUST00000175121 64 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 Gm44384-201ENSMUST00000200208 114 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 Snora20-201ENSMUST00000082703 128 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 Gm24523-201ENSMUST00000083965 132 ntBASIC1.88□□□□□ -2.11
Ddb1Q3U1J4 Snord64-201ENSMUST00000104003 67 ntBASIC1.87□□□□□ -2.11
Ddb1Q3U1J4 Gm25423-201ENSMUST00000157609 107 ntBASIC1.87□□□□□ -2.11
Ddb1Q3U1J4 Gm20391-201ENSMUST00000174722 106 ntBASIC1.87□□□□□ -2.11
Ddb1Q3U1J4 Mir5104-201ENSMUST00000175319 94 ntBASIC1.87□□□□□ -2.11
Ddb1Q3U1J4 Gm23347-201ENSMUST00000083823 82 ntBASIC1.87□□□□□ -2.11
Ddb1Q3U1J4 Gm22780-201ENSMUST00000104084 132 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Gm14923-201ENSMUST00000118270 155 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Gm11792-201ENSMUST00000120640 168 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Gm23170-201ENSMUST00000157158 106 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Gm24718-201ENSMUST00000157521 136 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Gm25769-201ENSMUST00000158569 127 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Gm23197-201ENSMUST00000158809 112 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Mir7241-201ENSMUST00000184532 64 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Mir6928-201ENSMUST00000185166 70 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Snord14a-201ENSMUST00000082807 87 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Mir344-201ENSMUST00000083634 95 ntBASIC1.86□□□□□ -2.11
Ddb1Q3U1J4 Gm26081-201ENSMUST00000104068 132 ntBASIC1.85□□□□□ -2.11
Ddb1Q3U1J4 Gm22558-201ENSMUST00000157326 95 ntBASIC1.85□□□□□ -2.11
Ddb1Q3U1J4 Gm24229-201ENSMUST00000158830 118 ntBASIC1.85□□□□□ -2.11
Ddb1Q3U1J4 Gm23636-201ENSMUST00000175070 95 ntBASIC1.85□□□□□ -2.11
Ddb1Q3U1J4 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ddb1Q3U1J4 Gm45471-201ENSMUST00000211270 281 ntBASIC1.85□□□□□ -2.11
Ddb1Q3U1J4 Gm16976-205ENSMUST00000227324 226 ntBASIC1.85□□□□□ -2.11
Ddb1Q3U1J4 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ddb1Q3U1J4 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ddb1Q3U1J4 Gm23083-201ENSMUST00000157851 116 ntBASIC1.84□□□□□ -2.11
Ddb1Q3U1J4 Mir3061-201ENSMUST00000175129 91 ntBASIC1.84□□□□□ -2.11
Ddb1Q3U1J4 Gm24926-201ENSMUST00000178053 79 ntBASIC1.84□□□□□ -2.11
Ddb1Q3U1J4 Gm22632-201ENSMUST00000178266 79 ntBASIC1.84□□□□□ -2.11
Ddb1Q3U1J4 Gm8034-201ENSMUST00000178853 132 ntBASIC1.84□□□□□ -2.11
Ddb1Q3U1J4 Mir669j-201ENSMUST00000179023 121 ntBASIC1.84□□□□□ -2.11
Ddb1Q3U1J4 Mir196b-201ENSMUST00000083509 85 ntBASIC1.84□□□□□ -2.11
Ddb1Q3U1J4 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm24250-201ENSMUST00000157320 135 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm26090-201ENSMUST00000157897 128 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm22332-201ENSMUST00000158072 126 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm23770-201ENSMUST00000178009 108 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm22832-201ENSMUST00000178022 108 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm23863-201ENSMUST00000178265 108 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm24828-201ENSMUST00000178507 108 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm23052-201ENSMUST00000178633 108 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm25729-201ENSMUST00000179050 108 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm25359-201ENSMUST00000179315 108 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm22624-201ENSMUST00000179913 108 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Gm44458-201ENSMUST00000196594 143 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Mir451a-201ENSMUST00000093557 72 ntBASIC1.83□□□□□ -2.12
Ddb1Q3U1J4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ddb1Q3U1J4 Mir547-201ENSMUST00000102051 78 ntBASIC1.82□□□□□ -2.12
Ddb1Q3U1J4 Gm26076-201ENSMUST00000104065 105 ntBASIC1.82□□□□□ -2.12
Ddb1Q3U1J4 Gm15289-201ENSMUST00000117793 244 ntBASIC1.82□□□□□ -2.12
Ddb1Q3U1J4 Gm25367-201ENSMUST00000158846 106 ntBASIC1.82□□□□□ -2.12
Ddb1Q3U1J4 Gm22403-201ENSMUST00000174919 84 ntBASIC1.82□□□□□ -2.12
Ddb1Q3U1J4 Gm25038-201ENSMUST00000082928 130 ntBASIC1.82□□□□□ -2.12
Ddb1Q3U1J4 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.82□□□□□ -2.12
Ddb1Q3U1J4 Gm23907-201ENSMUST00000104595 189 ntBASIC1.81□□□□□ -2.12
Ddb1Q3U1J4 Gm22031-201ENSMUST00000116945 126 ntBASIC1.81□□□□□ -2.12
Ddb1Q3U1J4 Gm14946-201ENSMUST00000119859 296 ntBASIC1.81□□□□□ -2.12
Ddb1Q3U1J4 Gm22082-201ENSMUST00000157587 161 ntBASIC1.81□□□□□ -2.12
Ddb1Q3U1J4 Gm22708-201ENSMUST00000158987 103 ntBASIC1.81□□□□□ -2.12
Ddb1Q3U1J4 Mir466-201ENSMUST00000093591 73 ntBASIC1.81□□□□□ -2.12
Ddb1Q3U1J4 Mir544-201ENSMUST00000103813 78 ntBASIC1.8□□□□□ -2.12
Ddb1Q3U1J4 Gm25091-201ENSMUST00000103997 71 ntBASIC1.8□□□□□ -2.12
Ddb1Q3U1J4 Gm22603-201ENSMUST00000157603 96 ntBASIC1.8□□□□□ -2.12
Ddb1Q3U1J4 Gm25889-201ENSMUST00000157775 107 ntBASIC1.8□□□□□ -2.12
Ddb1Q3U1J4 Mir7675-201ENSMUST00000184262 58 ntBASIC1.8□□□□□ -2.12
Ddb1Q3U1J4 Gm43324-201ENSMUST00000197482 289 ntBASIC1.8□□□□□ -2.12
Ddb1Q3U1J4 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.8□□□□□ -2.12
Ddb1Q3U1J4 Gm24252-201ENSMUST00000083700 132 ntBASIC1.8□□□□□ -2.12
Ddb1Q3U1J4 Gm24262-201ENSMUST00000157431 144 ntBASIC1.79□□□□□ -2.12
Ddb1Q3U1J4 Gm25949-201ENSMUST00000175333 114 ntBASIC1.79□□□□□ -2.12
Ddb1Q3U1J4 Gm22565-201ENSMUST00000175540 69 ntBASIC1.79□□□□□ -2.12
Ddb1Q3U1J4 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.79□□□□□ -2.12
Ddb1Q3U1J4 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.78□□□□□ -2.12
Ddb1Q3U1J4 Gm12309-201ENSMUST00000119889 182 ntBASIC1.78□□□□□ -2.12
Ddb1Q3U1J4 Gm26029-201ENSMUST00000158659 132 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms