Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.12□□□□□ -2.43
Trim43aQ3TL54 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.12□□□□□ -2.43
Trim43aQ3TL54 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC-0.12□□□□□ -2.43
Trim43aQ3TL54 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.12□□□□□ -2.43
Trim43aQ3TL54 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.12□□□□□ -2.43
Trim43aQ3TL54 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
Trim43aQ3TL54 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Trim43aQ3TL54 Snord60-201ENSMUST00000082834 78 ntBASIC-0.12□□□□□ -2.43
Trim43aQ3TL54 Mir875-201ENSMUST00000104698 78 ntBASIC-0.13□□□□□ -2.43
Trim43aQ3TL54 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.13□□□□□ -2.43
Trim43aQ3TL54 Gm23214-201ENSMUST00000122716 157 ntBASIC-0.13□□□□□ -2.43
Trim43aQ3TL54 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.13□□□□□ -2.43
Trim43aQ3TL54 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.13□□□□□ -2.43
Trim43aQ3TL54 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.13□□□□□ -2.43
Trim43aQ3TL54 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.13□□□□□ -2.43
Trim43aQ3TL54 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.13□□□□□ -2.43
Trim43aQ3TL54 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.14□□□□□ -2.43
Trim43aQ3TL54 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Trim43aQ3TL54 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.14□□□□□ -2.43
Trim43aQ3TL54 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.14□□□□□ -2.43
Trim43aQ3TL54 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.14□□□□□ -2.43
Trim43aQ3TL54 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.14□□□□□ -2.43
Trim43aQ3TL54 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.14□□□□□ -2.43
Trim43aQ3TL54 Snord100-201ENSMUST00000116836 74 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm11420-201ENSMUST00000120047 402 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Gm24765-201ENSMUST00000083691 103 ntBASIC-0.15□□□□□ -2.43
Trim43aQ3TL54 Mir672-201ENSMUST00000102331 100 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.16□□□□□ -2.44
Trim43aQ3TL54 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Snord85-201ENSMUST00000083262 73 ntBASIC-0.17□□□□□ -2.44
Trim43aQ3TL54 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Mir191-201ENSMUST00000196210 74 ntBASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Mir146-201ENSMUST00000083667 65 ntBASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.18□□□□□ -2.44
Trim43aQ3TL54 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Gm22479-201ENSMUST00000122566 81 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Mir18-201ENSMUST00000083469 96 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.19□□□□□ -2.44
Trim43aQ3TL54 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.2□□□□□ -2.44
Trim43aQ3TL54 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.2□□□□□ -2.44
Trim43aQ3TL54 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.2□□□□□ -2.44
Trim43aQ3TL54 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.2□□□□□ -2.44
Trim43aQ3TL54 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.2□□□□□ -2.44
Trim43aQ3TL54 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.2□□□□□ -2.44
Trim43aQ3TL54 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.2□□□□□ -2.44
Trim43aQ3TL54 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.2□□□□□ -2.44
Trim43aQ3TL54 Gm22491-201ENSMUST00000157190 102 ntBASIC-0.21□□□□□ -2.44
Trim43aQ3TL54 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.21□□□□□ -2.44
Trim43aQ3TL54 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
Trim43aQ3TL54 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.21□□□□□ -2.44
Trim43aQ3TL54 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.21□□□□□ -2.44
Trim43aQ3TL54 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.21□□□□□ -2.44
Trim43aQ3TL54 Gm25512-201ENSMUST00000083863 107 ntBASIC-0.21□□□□□ -2.44
Trim43aQ3TL54 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.22□□□□□ -2.44
Trim43aQ3TL54 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.22□□□□□ -2.44
Trim43aQ3TL54 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.22□□□□□ -2.44
Trim43aQ3TL54 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms