Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm22963-201ENSMUST00000157960 91 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm24900-201ENSMUST00000158128 134 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm22093-201ENSMUST00000158980 111 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm25241-201ENSMUST00000174909 84 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm26217-201ENSMUST00000175212 84 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm23289-201ENSMUST00000175615 108 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm27898-201ENSMUST00000183987 80 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm3724-201ENSMUST00000197957 349 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Snora3-201ENSMUST00000083082 132 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm26123-201ENSMUST00000083363 135 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm26154-201ENSMUST00000102339 96 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Gm25611-201ENSMUST00000104017 133 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.09□□□□□ -2.07
Ebf1Q07802 Gm22729-201ENSMUST00000158088 129 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Gm27443-201ENSMUST00000184660 98 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Gm29535-201ENSMUST00000185723 109 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Gm28143-201ENSMUST00000191082 109 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Mir7217-201ENSMUST00000200304 62 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Gm44807-201ENSMUST00000206115 154 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Gm24524-201ENSMUST00000082925 170 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Mir300-201ENSMUST00000083485 79 ntBASIC2.09□□□□□ -2.07
Ebf1Q07802 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Ebf1Q07802 Gm11248-201ENSMUST00000119568 201 ntBASIC2.08□□□□□ -2.08
Ebf1Q07802 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.08□□□□□ -2.08
Ebf1Q07802 Gm26213-201ENSMUST00000158582 110 ntBASIC2.08□□□□□ -2.08
Ebf1Q07802 Mir6901-201ENSMUST00000185062 62 ntBASIC2.08□□□□□ -2.08
Ebf1Q07802 Gm27979-201ENSMUST00000185126 56 ntBASIC2.08□□□□□ -2.08
Ebf1Q07802 Gm45471-201ENSMUST00000211270 281 ntBASIC2.08□□□□□ -2.08
Ebf1Q07802 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.08□□□□□ -2.08
Ebf1Q07802 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Ebf1Q07802 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
Ebf1Q07802 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Ebf1Q07802 Gm25113-201ENSMUST00000157185 143 ntBASIC2.07□□□□□ -2.08
Ebf1Q07802 Gm24394-201ENSMUST00000158141 123 ntBASIC2.07□□□□□ -2.08
Ebf1Q07802 Gm25750-201ENSMUST00000175483 112 ntBASIC2.07□□□□□ -2.08
Ebf1Q07802 Gm42795-201ENSMUST00000198847 76 ntBASIC2.07□□□□□ -2.08
Ebf1Q07802 Gm43977-201ENSMUST00000203970 189 ntBASIC2.07□□□□□ -2.08
Ebf1Q07802 Gm23790-201ENSMUST00000083013 107 ntBASIC2.07□□□□□ -2.08
Ebf1Q07802 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Ebf1Q07802 Gm22494-201ENSMUST00000104495 128 ntBASIC2.06□□□□□ -2.08
Ebf1Q07802 Gm22454-201ENSMUST00000082583 107 ntBASIC2.06□□□□□ -2.08
Ebf1Q07802 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.05□□□□□ -2.08
Ebf1Q07802 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ebf1Q07802 Gm25680-201ENSMUST00000116917 126 ntBASIC2.05□□□□□ -2.08
Ebf1Q07802 Gm22635-201ENSMUST00000116962 126 ntBASIC2.05□□□□□ -2.08
Ebf1Q07802 Snord43-201ENSMUST00000199549 108 ntBASIC2.05□□□□□ -2.08
Ebf1Q07802 Gm22884-201ENSMUST00000083127 140 ntBASIC2.05□□□□□ -2.08
Ebf1Q07802 Mir30d-201ENSMUST00000083503 82 ntBASIC2.05□□□□□ -2.08
Ebf1Q07802 Gm22827-201ENSMUST00000083766 107 ntBASIC2.05□□□□□ -2.08
Ebf1Q07802 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ebf1Q07802 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.04□□□□□ -2.08
Ebf1Q07802 Gm16550-201ENSMUST00000162550 126 ntBASIC2.04□□□□□ -2.08
Ebf1Q07802 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.04□□□□□ -2.08
Ebf1Q07802 Mir21c-201ENSMUST00000184910 78 ntBASIC2.04□□□□□ -2.08
Ebf1Q07802 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ebf1Q07802 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ebf1Q07802 Gm14882-201ENSMUST00000117216 218 ntBASIC2.03□□□□□ -2.08
Ebf1Q07802 Gm14947-201ENSMUST00000133704 303 ntBASIC2.03□□□□□ -2.08
Ebf1Q07802 Gm22727-201ENSMUST00000158090 116 ntBASIC2.03□□□□□ -2.08
Ebf1Q07802 Gm25011-201ENSMUST00000158398 126 ntBASIC2.03□□□□□ -2.08
Ebf1Q07802 Gm23349-201ENSMUST00000158432 98 ntBASIC2.03□□□□□ -2.08
Ebf1Q07802 Mir6379-201ENSMUST00000183392 115 ntBASIC2.03□□□□□ -2.08
Ebf1Q07802 Mir151-201ENSMUST00000083678 68 ntBASIC2.03□□□□□ -2.08
Ebf1Q07802 Gm24523-201ENSMUST00000083965 132 ntBASIC2.03□□□□□ -2.08
Ebf1Q07802 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Ebf1Q07802 Gm25460-201ENSMUST00000157954 127 ntBASIC2.02□□□□□ -2.09
Ebf1Q07802 Gm23375-201ENSMUST00000175407 83 ntBASIC2.02□□□□□ -2.09
Ebf1Q07802 Gm42935-201ENSMUST00000202004 151 ntBASIC2.02□□□□□ -2.09
Ebf1Q07802 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.02□□□□□ -2.09
Ebf1Q07802 Gm22706-201ENSMUST00000157907 112 ntBASIC2.01□□□□□ -2.09
Ebf1Q07802 Gm24076-201ENSMUST00000158179 94 ntBASIC2.01□□□□□ -2.09
Ebf1Q07802 Gm25976-201ENSMUST00000158695 130 ntBASIC2.01□□□□□ -2.09
Ebf1Q07802 Gm24880-201ENSMUST00000158776 85 ntBASIC2.01□□□□□ -2.09
Ebf1Q07802 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.01□□□□□ -2.09
Ebf1Q07802 Gm25949-201ENSMUST00000175333 114 ntBASIC2.01□□□□□ -2.09
Ebf1Q07802 Mir3087-201ENSMUST00000199405 56 ntBASIC2.01□□□□□ -2.09
Ebf1Q07802 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.01□□□□□ -2.09
Ebf1Q07802 Gm26109-201ENSMUST00000083970 70 ntBASIC2.01□□□□□ -2.09
Ebf1Q07802 Gm22551-201ENSMUST00000157795 103 ntBASIC2□□□□□ -2.09
Ebf1Q07802 Gm22556-201ENSMUST00000157803 100 ntBASIC2□□□□□ -2.09
Ebf1Q07802 Gm25329-201ENSMUST00000158041 126 ntBASIC2□□□□□ -2.09
Ebf1Q07802 Gm22425-201ENSMUST00000158532 138 ntBASIC2□□□□□ -2.09
Ebf1Q07802 Gm22129-201ENSMUST00000179034 107 ntBASIC2□□□□□ -2.09
Ebf1Q07802 Mir7683-201ENSMUST00000183842 61 ntBASIC2□□□□□ -2.09
Ebf1Q07802 Mir93-201ENSMUST00000083593 88 ntBASIC2□□□□□ -2.09
Ebf1Q07802 Mir1949-201ENSMUST00000157434 141 ntBASIC1.99□□□□□ -2.09
Ebf1Q07802 Gm20391-201ENSMUST00000174722 106 ntBASIC1.99□□□□□ -2.09
Ebf1Q07802 Gm23369-201ENSMUST00000175406 105 ntBASIC1.99□□□□□ -2.09
Ebf1Q07802 Mir7016-201ENSMUST00000184308 72 ntBASIC1.99□□□□□ -2.09
Ebf1Q07802 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Ebf1Q07802 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Ebf1Q07802 Gm23766-201ENSMUST00000103894 80 ntBASIC1.98□□□□□ -2.09
Ebf1Q07802 Gm22679-201ENSMUST00000116975 100 ntBASIC1.98□□□□□ -2.09
Ebf1Q07802 Gm23469-201ENSMUST00000157131 104 ntBASIC1.98□□□□□ -2.09
Ebf1Q07802 Gm25370-201ENSMUST00000158159 94 ntBASIC1.98□□□□□ -2.09
Ebf1Q07802 Gm22089-201ENSMUST00000158336 102 ntBASIC1.98□□□□□ -2.09
Ebf1Q07802 Gm22770-201ENSMUST00000158368 67 ntBASIC1.98□□□□□ -2.09
Ebf1Q07802 Gm22943-201ENSMUST00000158564 76 ntBASIC1.98□□□□□ -2.09
Ebf1Q07802 Gm23813-201ENSMUST00000175153 77 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 193.4 ms