Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm23237-201ENSMUST00000104639 92 ntBASIC1.95□□□□□ -2.1
Col8a1Q00780 Gm24212-201ENSMUST00000158258 132 ntBASIC1.95□□□□□ -2.1
Col8a1Q00780 Gm44478-201ENSMUST00000204875 114 ntBASIC1.95□□□□□ -2.1
Col8a1Q00780 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.95□□□□□ -2.1
Col8a1Q00780 Gm26441-201ENSMUST00000082590 104 ntBASIC1.95□□□□□ -2.1
Col8a1Q00780 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col8a1Q00780 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Mir758-201ENSMUST00000103260 81 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Mir880-201ENSMUST00000104809 78 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm23109-201ENSMUST00000116867 126 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm24394-201ENSMUST00000158141 123 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm22089-201ENSMUST00000158336 102 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Mir669n-201ENSMUST00000158636 54 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm26004-201ENSMUST00000158804 116 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm23370-201ENSMUST00000199545 130 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm44807-201ENSMUST00000206115 154 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm19118-201ENSMUST00000222554 98 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm23056-201ENSMUST00000082803 111 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.94□□□□□ -2.1
Col8a1Q00780 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
Col8a1Q00780 Gm25329-201ENSMUST00000158041 126 ntBASIC1.93□□□□□ -2.1
Col8a1Q00780 Gm23065-201ENSMUST00000158236 130 ntBASIC1.93□□□□□ -2.1
Col8a1Q00780 Gm23917-201ENSMUST00000175256 98 ntBASIC1.93□□□□□ -2.1
Col8a1Q00780 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.93□□□□□ -2.1
Col8a1Q00780 Gm20108-201ENSMUST00000219977 153 ntBASIC1.93□□□□□ -2.1
Col8a1Q00780 Mir451a-201ENSMUST00000093557 72 ntBASIC1.93□□□□□ -2.1
Col8a1Q00780 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col8a1Q00780 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
Col8a1Q00780 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.93□□□□□ -2.1
Col8a1Q00780 Gm23468-201ENSMUST00000157125 108 ntBASIC1.92□□□□□ -2.1
Col8a1Q00780 Gm23600-201ENSMUST00000157260 71 ntBASIC1.92□□□□□ -2.1
Col8a1Q00780 Gm22556-201ENSMUST00000157803 100 ntBASIC1.92□□□□□ -2.1
Col8a1Q00780 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.92□□□□□ -2.1
Col8a1Q00780 Gm42935-201ENSMUST00000202004 151 ntBASIC1.92□□□□□ -2.1
Col8a1Q00780 Mir429-201ENSMUST00000083493 83 ntBASIC1.92□□□□□ -2.1
Col8a1Q00780 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Col8a1Q00780 Gm26154-201ENSMUST00000102339 96 ntBASIC1.91□□□□□ -2.1
Col8a1Q00780 Gm25611-201ENSMUST00000104017 133 ntBASIC1.91□□□□□ -2.1
Col8a1Q00780 Gm14588-201ENSMUST00000119895 172 ntBASIC1.91□□□□□ -2.1
Col8a1Q00780 Gm22815-201ENSMUST00000157451 62 ntBASIC1.91□□□□□ -2.1
Col8a1Q00780 Gm24637-201ENSMUST00000158674 85 ntBASIC1.91□□□□□ -2.1
Col8a1Q00780 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.91□□□□□ -2.1
Col8a1Q00780 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Col8a1Q00780 Gm45471-201ENSMUST00000211270 281 ntBASIC1.91□□□□□ -2.1
Col8a1Q00780 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Col8a1Q00780 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Col8a1Q00780 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Col8a1Q00780 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.9□□□□□ -2.1
Col8a1Q00780 Gm25061-201ENSMUST00000104665 107 ntBASIC1.9□□□□□ -2.11
Col8a1Q00780 Gm11856-201ENSMUST00000118712 276 ntBASIC1.9□□□□□ -2.11
Col8a1Q00780 Gm43722-201ENSMUST00000196054 124 ntBASIC1.9□□□□□ -2.11
Col8a1Q00780 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.9□□□□□ -2.11
Col8a1Q00780 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Col8a1Q00780 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.9□□□□□ -2.11
Col8a1Q00780 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.89□□□□□ -2.11
Col8a1Q00780 Gm26369-201ENSMUST00000157825 100 ntBASIC1.89□□□□□ -2.11
Col8a1Q00780 Gm24851-201ENSMUST00000158028 103 ntBASIC1.89□□□□□ -2.11
Col8a1Q00780 Gm22605-201ENSMUST00000158289 108 ntBASIC1.89□□□□□ -2.11
Col8a1Q00780 Gm24638-201ENSMUST00000179807 132 ntBASIC1.89□□□□□ -2.11
Col8a1Q00780 Gm23293-201ENSMUST00000082552 104 ntBASIC1.89□□□□□ -2.11
Col8a1Q00780 Gm26123-201ENSMUST00000083363 135 ntBASIC1.89□□□□□ -2.11
Col8a1Q00780 Gm22723-201ENSMUST00000083820 129 ntBASIC1.89□□□□□ -2.11
Col8a1Q00780 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.89□□□□□ -2.11
Col8a1Q00780 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Col8a1Q00780 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.88□□□□□ -2.11
Col8a1Q00780 Gm22677-201ENSMUST00000116977 108 ntBASIC1.88□□□□□ -2.11
Col8a1Q00780 Gm25241-201ENSMUST00000174909 84 ntBASIC1.88□□□□□ -2.11
Col8a1Q00780 Gm26217-201ENSMUST00000175212 84 ntBASIC1.88□□□□□ -2.11
Col8a1Q00780 Gm24674-201ENSMUST00000179194 104 ntBASIC1.88□□□□□ -2.11
Col8a1Q00780 Mir7232-201ENSMUST00000197929 74 ntBASIC1.88□□□□□ -2.11
Col8a1Q00780 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.88□□□□□ -2.11
Col8a1Q00780 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.88□□□□□ -2.11
Col8a1Q00780 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col8a1Q00780 Gm25068-201ENSMUST00000103895 110 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Gm26080-201ENSMUST00000104069 131 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Gm16328-201ENSMUST00000126985 196 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Gm23996-201ENSMUST00000158062 131 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Gm23267-201ENSMUST00000178490 132 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Mir6379-201ENSMUST00000183392 115 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Mir6237-201ENSMUST00000183808 91 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Mir6388-201ENSMUST00000184417 75 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Mir3069-201ENSMUST00000198802 65 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Gm24805-201ENSMUST00000082931 104 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.87□□□□□ -2.11
Col8a1Q00780 Gm24333-201ENSMUST00000175101 84 ntBASIC1.86□□□□□ -2.11
Col8a1Q00780 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.86□□□□□ -2.11
Col8a1Q00780 Gm25229-201ENSMUST00000178587 79 ntBASIC1.86□□□□□ -2.11
Col8a1Q00780 Gm44490-201ENSMUST00000198566 127 ntBASIC1.86□□□□□ -2.11
Col8a1Q00780 Gm43626-201ENSMUST00000198575 162 ntBASIC1.86□□□□□ -2.11
Col8a1Q00780 Gm3702-201ENSMUST00000211754 346 ntBASIC1.86□□□□□ -2.11
Col8a1Q00780 Gm8031-201ENSMUST00000213430 626 ntBASIC1.86□□□□□ -2.11
Col8a1Q00780 Gm23715-201ENSMUST00000157354 106 ntBASIC1.85□□□□□ -2.11
Col8a1Q00780 Gm22425-201ENSMUST00000158532 138 ntBASIC1.85□□□□□ -2.11
Col8a1Q00780 Gm24880-201ENSMUST00000158776 85 ntBASIC1.85□□□□□ -2.11
Col8a1Q00780 Gm16550-201ENSMUST00000162550 126 ntBASIC1.85□□□□□ -2.11
Col8a1Q00780 Gm27639-201ENSMUST00000184937 85 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms