Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm23991-201ENSMUST00000117033 93 ntBASIC0.26□□□□□ -2.37
Ufd1P70362 Gm23545-201ENSMUST00000158205 104 ntBASIC0.26□□□□□ -2.37
Ufd1P70362 Gm16550-201ENSMUST00000162550 126 ntBASIC0.26□□□□□ -2.37
Ufd1P70362 Mir6369-201ENSMUST00000183772 106 ntBASIC0.26□□□□□ -2.37
Ufd1P70362 Mir7039-201ENSMUST00000183852 85 ntBASIC0.26□□□□□ -2.37
Ufd1P70362 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Ufd1P70362 Mir669l-201ENSMUST00000103771 98 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 Scarna9-201ENSMUST00000104318 70 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 Gm22332-201ENSMUST00000158072 126 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 Gm25976-201ENSMUST00000158695 130 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 Mir100-201ENSMUST00000175270 80 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 Gm23141-201ENSMUST00000178682 94 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 Gm27993-201ENSMUST00000184362 85 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 Gm24258-201ENSMUST00000083739 133 ntBASIC0.25□□□□□ -2.37
Ufd1P70362 Gm22673-201ENSMUST00000104415 131 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Mir1899-201ENSMUST00000122798 96 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Gm22557-201ENSMUST00000157804 102 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Gm26360-201ENSMUST00000158872 103 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.24□□□□□ -2.37
Ufd1P70362 Gm27475-201ENSMUST00000183420 61 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Mir7065-201ENSMUST00000185110 61 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Gm37330-201ENSMUST00000192606 153 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Gm3702-201ENSMUST00000211754 346 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.24□□□□□ -2.37
Ufd1P70362 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.24□□□□□ -2.37
Ufd1P70362 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Gm25141-201ENSMUST00000083177 107 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Rny1-201ENSMUST00000083767 112 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Mir489-201ENSMUST00000093599 107 ntBASIC0.24□□□□□ -2.37
Ufd1P70362 Gm25170-201ENSMUST00000104191 129 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Gm23672-201ENSMUST00000157471 107 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Gm22239-201ENSMUST00000175220 103 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Mir6928-201ENSMUST00000185166 70 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Gm37889-201ENSMUST00000194174 251 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.23□□□□□ -2.37
Ufd1P70362 Gm23301-201ENSMUST00000082713 65 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Gm23969-201ENSMUST00000083324 74 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Mir200a-201ENSMUST00000083466 90 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Gm10172-201ENSMUST00000085929 558 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.23□□□□□ -2.37
Ufd1P70362 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Ufd1P70362 Gm22149-201ENSMUST00000104442 136 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Gm15654-201ENSMUST00000152660 300 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Gm25390-201ENSMUST00000157341 103 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Gm22946-201ENSMUST00000158558 82 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Gm24575-201ENSMUST00000175502 77 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Gm22951-201ENSMUST00000179471 107 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Mir30f-201ENSMUST00000196073 92 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Snord60-201ENSMUST00000082834 78 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.22□□□□□ -2.37
Ufd1P70362 Gm11248-201ENSMUST00000119568 201 ntBASIC0.21□□□□□ -2.38
Ufd1P70362 Gm22079-201ENSMUST00000157592 106 ntBASIC0.21□□□□□ -2.38
Ufd1P70362 Gm26285-201ENSMUST00000177923 107 ntBASIC0.21□□□□□ -2.38
Ufd1P70362 Gm37116-201ENSMUST00000195161 147 ntBASIC0.21□□□□□ -2.38
Ufd1P70362 Gm44457-201ENSMUST00000198109 76 ntBASIC0.21□□□□□ -2.38
Ufd1P70362 Gm42506-201ENSMUST00000202009 150 ntBASIC0.21□□□□□ -2.38
Ufd1P70362 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Ufd1P70362 Gm23622-201ENSMUST00000082460 107 ntBASIC0.21□□□□□ -2.38
Ufd1P70362 Gm22520-201ENSMUST00000158269 129 ntBASIC0.2□□□□□ -2.38
Ufd1P70362 Gm22612-201ENSMUST00000158293 101 ntBASIC0.2□□□□□ -2.38
Ufd1P70362 Gm26116-201ENSMUST00000175600 77 ntBASIC0.2□□□□□ -2.38
Ufd1P70362 Mir721-201ENSMUST00000200230 88 ntBASIC0.2□□□□□ -2.38
Ufd1P70362 Gm44807-201ENSMUST00000206115 154 ntBASIC0.2□□□□□ -2.38
Ufd1P70362 Snord82-201ENSMUST00000082889 70 ntBASIC0.2□□□□□ -2.38
Ufd1P70362 Gm22287-201ENSMUST00000083197 107 ntBASIC0.2□□□□□ -2.38
Ufd1P70362 Mir377-201ENSMUST00000083504 68 ntBASIC0.2□□□□□ -2.38
Ufd1P70362 Gm23881-201ENSMUST00000116872 66 ntBASIC0.19□□□□□ -2.38
Ufd1P70362 Gm13577-201ENSMUST00000121365 205 ntBASIC0.19□□□□□ -2.38
Ufd1P70362 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.19□□□□□ -2.38
Ufd1P70362 Gm23917-201ENSMUST00000175256 98 ntBASIC0.19□□□□□ -2.38
Ufd1P70362 Mir6394-201ENSMUST00000184738 99 ntBASIC0.19□□□□□ -2.38
Ufd1P70362 Gm37586-201ENSMUST00000193654 204 ntBASIC0.19□□□□□ -2.38
Ufd1P70362 Mir7229-201ENSMUST00000197062 53 ntBASIC0.19□□□□□ -2.38
Ufd1P70362 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Ufd1P70362 Gm23321-201ENSMUST00000104465 126 ntBASIC0.18□□□□□ -2.38
Ufd1P70362 Scarna8-201ENSMUST00000158333 131 ntBASIC0.18□□□□□ -2.38
Ufd1P70362 Gm26158-201ENSMUST00000158973 119 ntBASIC0.18□□□□□ -2.38
Ufd1P70362 Gm10548-202ENSMUST00000165672 272 ntBASIC0.18□□□□□ -2.38
Ufd1P70362 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.18□□□□□ -2.38
Ufd1P70362 Mir201-201ENSMUST00000083470 66 ntBASIC0.18□□□□□ -2.38
Ufd1P70362 Mir344-201ENSMUST00000083634 95 ntBASIC0.18□□□□□ -2.38
Ufd1P70362 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Ufd1P70362 Gm25610-201ENSMUST00000104016 129 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Gm23772-201ENSMUST00000104433 102 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Gm24833-201ENSMUST00000116775 120 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Gm24238-201ENSMUST00000157792 98 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Gm25834-201ENSMUST00000158916 101 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Mir6365-201ENSMUST00000183990 101 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Mir6985-201ENSMUST00000184641 61 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Gm44455-201ENSMUST00000200061 82 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.17□□□□□ -2.38
Ufd1P70362 Gm24132-201ENSMUST00000104745 91 ntBASIC0.16□□□□□ -2.38
Ufd1P70362 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.16□□□□□ -2.38
Ufd1P70362 Gm14838-201ENSMUST00000118913 248 ntBASIC0.16□□□□□ -2.38
Ufd1P70362 Gm16186-201ENSMUST00000120132 216 ntBASIC0.16□□□□□ -2.38
Ufd1P70362 Gm44469-201ENSMUST00000198558 79 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 181.9 ms