Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.11□□□□□ -2.59
Cux1P53564 Mir30f-201ENSMUST00000196073 92 ntBASIC-1.11□□□□□ -2.59
Cux1P53564 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.11□□□□□ -2.59
Cux1P53564 AC125190.3-201ENSMUST00000223224 121 ntBASIC-1.11□□□□□ -2.59
Cux1P53564 Gm24275-201ENSMUST00000116780 146 ntBASIC-1.12□□□□□ -2.59
Cux1P53564 Gm23474-201ENSMUST00000158884 75 ntBASIC-1.12□□□□□ -2.59
Cux1P53564 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.12□□□□□ -2.59
Cux1P53564 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.13□□□□□ -2.59
Cux1P53564 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.14□□□□□ -2.59
Cux1P53564 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.14□□□□□ -2.59
Cux1P53564 Gm26400-201ENSMUST00000175012 85 ntBASIC-1.14□□□□□ -2.59
Cux1P53564 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.14□□□□□ -2.59
Cux1P53564 Mir7651-201ENSMUST00000184154 64 ntBASIC-1.14□□□□□ -2.59
Cux1P53564 Gm44807-201ENSMUST00000206115 154 ntBASIC-1.14□□□□□ -2.59
Cux1P53564 Gm25848-201ENSMUST00000116790 144 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm24241-201ENSMUST00000157787 145 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
Cux1P53564 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
Cux1P53564 Mir96-201ENSMUST00000083652 106 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm25600-201ENSMUST00000158357 106 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm24129-201ENSMUST00000158537 97 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.15□□□□□ -2.59
Cux1P53564 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.16□□□□□ -2.59
Cux1P53564 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.16□□□□□ -2.6
Cux1P53564 Gm28849-201ENSMUST00000188127 174 ntBASIC-1.16□□□□□ -2.6
Cux1P53564 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.16□□□□□ -2.6
Cux1P53564 Gm24455-201ENSMUST00000083348 131 ntBASIC-1.16□□□□□ -2.6
Cux1P53564 Gm24276-201ENSMUST00000102181 110 ntBASIC-1.17□□□□□ -2.6
Cux1P53564 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.17□□□□□ -2.6
Cux1P53564 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
Cux1P53564 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-1.17□□□□□ -2.6
Cux1P53564 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.17□□□□□ -2.6
Cux1P53564 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.18□□□□□ -2.6
Cux1P53564 Gm25559-201ENSMUST00000157182 74 ntBASIC-1.18□□□□□ -2.6
Cux1P53564 Gm25464-201ENSMUST00000175481 107 ntBASIC-1.18□□□□□ -2.6
Cux1P53564 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.18□□□□□ -2.6
Cux1P53564 mt-Tc-201ENSMUST00000082400 66 ntBASIC-1.18□□□□□ -2.6
Cux1P53564 Gm11322-201ENSMUST00000118095 435 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Gm14906-201ENSMUST00000119265 390 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Snord8-201ENSMUST00000175303 110 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Mir3535-201ENSMUST00000197651 147 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Snora19-201ENSMUST00000082962 132 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Gm23658-201ENSMUST00000083233 132 ntBASIC-1.19□□□□□ -2.6
Cux1P53564 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm24962-201ENSMUST00000157917 109 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Mir1966-201ENSMUST00000158807 108 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm27919-201ENSMUST00000185163 107 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm44959-201ENSMUST00000209127 231 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm23627-201ENSMUST00000082459 107 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm22502-201ENSMUST00000082488 107 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm22977-201ENSMUST00000082615 107 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm24149-201ENSMUST00000082757 107 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Mir759-201ENSMUST00000103254 98 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
Cux1P53564 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.2□□□□□ -2.6
Cux1P53564 Gm25142-201ENSMUST00000082698 107 ntBASIC-1.22□□□□□ -2.6
Cux1P53564 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.23□□□□□ -2.61
Cux1P53564 Gm23982-201ENSMUST00000157141 106 ntBASIC-1.23□□□□□ -2.61
Cux1P53564 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.23□□□□□ -2.61
Cux1P53564 Gm29818-201ENSMUST00000218070 165 ntBASIC-1.23□□□□□ -2.61
Cux1P53564 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.23□□□□□ -2.61
Cux1P53564 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.24□□□□□ -2.61
Cux1P53564 Gm25610-201ENSMUST00000104016 129 ntBASIC-1.24□□□□□ -2.61
Cux1P53564 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.24□□□□□ -2.61
Cux1P53564 Gm12647-201ENSMUST00000118977 265 ntBASIC-1.24□□□□□ -2.61
Cux1P53564 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.24□□□□□ -2.61
Cux1P53564 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-1.24□□□□□ -2.61
Cux1P53564 AC116589.1-201ENSMUST00000220634 327 ntBASIC-1.24□□□□□ -2.61
Cux1P53564 AC166358.7-201ENSMUST00000221132 108 ntBASIC-1.24□□□□□ -2.61
Cux1P53564 AC125543.5-201ENSMUST00000222799 108 ntBASIC-1.24□□□□□ -2.61
Cux1P53564 Gm25991-201ENSMUST00000102439 99 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.25□□□□□ -2.61
Cux1P53564 AC145736.2-201ENSMUST00000216305 365 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Gm23614-201ENSMUST00000082598 107 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Gm22686-201ENSMUST00000082847 100 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.25□□□□□ -2.61
Cux1P53564 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.26□□□□□ -2.61
Cux1P53564 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.26□□□□□ -2.61
Cux1P53564 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
Cux1P53564 n-R5s94-201ENSMUST00000082573 119 ntBASIC-1.26□□□□□ -2.61
Cux1P53564 Gm23239-201ENSMUST00000083006 181 ntBASIC-1.26□□□□□ -2.61
Cux1P53564 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.26□□□□□ -2.61
Cux1P53564 Gm23640-201ENSMUST00000157860 104 ntBASIC-1.27□□□□□ -2.61
Cux1P53564 Gm7240-201ENSMUST00000220769 664 ntBASIC-1.27□□□□□ -2.61
Cux1P53564 Gm24204-201ENSMUST00000082950 107 ntBASIC-1.27□□□□□ -2.61
Cux1P53564 Gm23097-201ENSMUST00000083448 105 ntBASIC-1.27□□□□□ -2.61
Cux1P53564 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-1.28□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms