Protein–RNA interactions for Protein: P51491

Opn1sw, Short-wave-sensitive opsin 1, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Opn1swP51491 Mir362-201ENSMUST00000093592 65 ntBASIC0.6□□□□□ -2.31
Opn1swP51491 Gm25611-201ENSMUST00000104017 133 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm22148-201ENSMUST00000104445 107 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm25110-201ENSMUST00000116684 121 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm25775-201ENSMUST00000116716 121 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm24795-201ENSMUST00000116737 121 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm25171-201ENSMUST00000116926 121 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm25544-201ENSMUST00000122676 120 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm22790-201ENSMUST00000157229 129 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm24250-201ENSMUST00000157320 135 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm22431-201ENSMUST00000158545 107 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm22476-201ENSMUST00000158902 100 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Mir1933-201ENSMUST00000158930 88 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm23770-201ENSMUST00000178009 108 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm22832-201ENSMUST00000178022 108 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm23863-201ENSMUST00000178265 108 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm24828-201ENSMUST00000178507 108 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm23052-201ENSMUST00000178633 108 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm25729-201ENSMUST00000179050 108 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm25359-201ENSMUST00000179315 108 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm22624-201ENSMUST00000179913 108 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm27285-201ENSMUST00000183875 127 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Mir500-201ENSMUST00000093600 92 ntBASIC0.59□□□□□ -2.31
Opn1swP51491 Gm26420-201ENSMUST00000104273 103 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 Gm25985-201ENSMUST00000122677 107 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 Gm22612-201ENSMUST00000158293 101 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 Gm16546-201ENSMUST00000159442 355 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.58□□□□□ -2.32
Opn1swP51491 Gm22887-201ENSMUST00000178586 107 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 Gm27465-201ENSMUST00000184290 91 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 Snord33-201ENSMUST00000083694 84 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 Gm24258-201ENSMUST00000083739 133 ntBASIC0.58□□□□□ -2.32
Opn1swP51491 Gm23605-201ENSMUST00000157255 127 ntBASIC0.57□□□□□ -2.32
Opn1swP51491 Gm24678-201ENSMUST00000158756 104 ntBASIC0.57□□□□□ -2.32
Opn1swP51491 Gm28435-201ENSMUST00000185496 108 ntBASIC0.57□□□□□ -2.32
Opn1swP51491 Gm45002-201ENSMUST00000208045 120 ntBASIC0.57□□□□□ -2.32
Opn1swP51491 Mir30a-201ENSMUST00000083471 71 ntBASIC0.57□□□□□ -2.32
Opn1swP51491 Gm22576-201ENSMUST00000083733 104 ntBASIC0.57□□□□□ -2.32
Opn1swP51491 Gm22786-201ENSMUST00000104086 122 ntBASIC0.56□□□□□ -2.32
Opn1swP51491 Gm23203-201ENSMUST00000104374 107 ntBASIC0.56□□□□□ -2.32
Opn1swP51491 Gm23838-201ENSMUST00000158067 162 ntBASIC0.56□□□□□ -2.32
Opn1swP51491 Gm22259-201ENSMUST00000178926 107 ntBASIC0.56□□□□□ -2.32
Opn1swP51491 Mir7079-201ENSMUST00000184697 69 ntBASIC0.56□□□□□ -2.32
Opn1swP51491 Gm37997-201ENSMUST00000193515 267 ntBASIC0.56□□□□□ -2.32
Opn1swP51491 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.56□□□□□ -2.32
Opn1swP51491 Gm23772-201ENSMUST00000104433 102 ntBASIC0.55□□□□□ -2.32
Opn1swP51491 Gm23853-201ENSMUST00000158375 104 ntBASIC0.55□□□□□ -2.32
Opn1swP51491 Gm24547-201ENSMUST00000158649 149 ntBASIC0.55□□□□□ -2.32
Opn1swP51491 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.55□□□□□ -2.32
Opn1swP51491 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.55□□□□□ -2.32
Opn1swP51491 Gm6272-201ENSMUST00000121256 171 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm24747-201ENSMUST00000157835 87 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm16550-201ENSMUST00000162550 126 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm26285-201ENSMUST00000177923 107 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm37586-201ENSMUST00000193654 204 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm43944-201ENSMUST00000205220 120 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm8219-201ENSMUST00000218309 242 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm23622-201ENSMUST00000082460 107 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm24527-201ENSMUST00000082920 107 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm25138-201ENSMUST00000083248 136 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Mir201-201ENSMUST00000083470 66 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Mir411-201ENSMUST00000083543 82 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Mir532-201ENSMUST00000093630 96 ntBASIC0.54□□□□□ -2.32
Opn1swP51491 Gm25378-201ENSMUST00000104333 129 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Gm16265-201ENSMUST00000134558 108 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Gm22079-201ENSMUST00000157592 106 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Gm23080-201ENSMUST00000157846 103 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Gm26236-201ENSMUST00000175536 137 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Gm37624-201ENSMUST00000193751 219 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Snord80-202ENSMUST00000199023 77 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Gm44488-201ENSMUST00000199467 119 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Mir216a-201ENSMUST00000083605 72 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Mir489-201ENSMUST00000093599 107 ntBASIC0.53□□□□□ -2.32
Opn1swP51491 Gm22796-201ENSMUST00000157234 106 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm22332-201ENSMUST00000158072 126 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm24728-201ENSMUST00000158226 125 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm24549-201ENSMUST00000158647 139 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm23416-201ENSMUST00000175520 95 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm24415-201ENSMUST00000180218 107 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm42795-201ENSMUST00000198847 76 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm44211-201ENSMUST00000204867 145 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm8508-201ENSMUST00000061226 363 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm26204-201ENSMUST00000082906 107 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Mir471-201ENSMUST00000093596 67 ntBASIC0.52□□□□□ -2.33
Opn1swP51491 Gm27934-201ENSMUST00000158795 63 ntBASIC0.51□□□□□ -2.33
Opn1swP51491 Gm22466-201ENSMUST00000175278 69 ntBASIC0.51□□□□□ -2.33
Opn1swP51491 Mir6390-201ENSMUST00000184405 129 ntBASIC0.51□□□□□ -2.33
Opn1swP51491 Mir6928-201ENSMUST00000185166 70 ntBASIC0.51□□□□□ -2.33
Opn1swP51491 Gm36956-201ENSMUST00000193830 214 ntBASIC0.51□□□□□ -2.33
Opn1swP51491 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Opn1swP51491 Gm23461-201ENSMUST00000083265 107 ntBASIC0.51□□□□□ -2.33
Opn1swP51491 Gm25161-201ENSMUST00000158913 132 ntBASIC0.5□□□□□ -2.33
Opn1swP51491 Gm27694-201ENSMUST00000184740 86 ntBASIC0.5□□□□□ -2.33
Opn1swP51491 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.5□□□□□ -2.33
Opn1swP51491 Gm22302-201ENSMUST00000082657 106 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 142.5 ms