Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Snord43-201ENSMUST00000199549 108 ntBASIC1.88□□□□□ -2.11
Shmt1P50431 Gm45471-201ENSMUST00000211270 281 ntBASIC1.88□□□□□ -2.11
Shmt1P50431 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.88□□□□□ -2.11
Shmt1P50431 Snora41-201ENSMUST00000082668 132 ntBASIC1.88□□□□□ -2.11
Shmt1P50431 Mir151-201ENSMUST00000083678 68 ntBASIC1.88□□□□□ -2.11
Shmt1P50431 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Shmt1P50431 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Shmt1P50431 Gm22772-201ENSMUST00000104451 121 ntBASIC1.87□□□□□ -2.11
Shmt1P50431 Gm25279-201ENSMUST00000122608 133 ntBASIC1.87□□□□□ -2.11
Shmt1P50431 Gm26213-201ENSMUST00000158582 110 ntBASIC1.87□□□□□ -2.11
Shmt1P50431 Gm23244-201ENSMUST00000083375 92 ntBASIC1.87□□□□□ -2.11
Shmt1P50431 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.87□□□□□ -2.11
Shmt1P50431 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
Shmt1P50431 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Shmt1P50431 Gm22429-201ENSMUST00000158553 130 ntBASIC1.86□□□□□ -2.11
Shmt1P50431 Gm25994-201ENSMUST00000175392 101 ntBASIC1.86□□□□□ -2.11
Shmt1P50431 Mir6379-201ENSMUST00000183392 115 ntBASIC1.86□□□□□ -2.11
Shmt1P50431 Mir6419-201ENSMUST00000184784 113 ntBASIC1.86□□□□□ -2.11
Shmt1P50431 Mir3087-201ENSMUST00000199405 56 ntBASIC1.86□□□□□ -2.11
Shmt1P50431 Gm43865-201ENSMUST00000204721 127 ntBASIC1.86□□□□□ -2.11
Shmt1P50431 Gm24412-201ENSMUST00000083426 109 ntBASIC1.86□□□□□ -2.11
Shmt1P50431 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Shmt1P50431 Gm14674-201ENSMUST00000117816 342 ntBASIC1.85□□□□□ -2.11
Shmt1P50431 Mir1949-201ENSMUST00000157434 141 ntBASIC1.85□□□□□ -2.11
Shmt1P50431 Gm20391-201ENSMUST00000174722 106 ntBASIC1.85□□□□□ -2.11
Shmt1P50431 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Shmt1P50431 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Shmt1P50431 Mir301b-201ENSMUST00000102333 97 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 Snord78-201ENSMUST00000104032 66 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 Gm25658-201ENSMUST00000158472 128 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 Gm24366-201ENSMUST00000175383 86 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 Mir6995-201ENSMUST00000183658 71 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 Gm37778-201ENSMUST00000191732 190 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 Gm42795-201ENSMUST00000198847 76 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 Gm22884-201ENSMUST00000083127 140 ntBASIC1.84□□□□□ -2.11
Shmt1P50431 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.84□□□□□ -2.12
Shmt1P50431 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Shmt1P50431 Gm22761-201ENSMUST00000102278 96 ntBASIC1.83□□□□□ -2.12
Shmt1P50431 Gm23208-201ENSMUST00000158666 127 ntBASIC1.83□□□□□ -2.12
Shmt1P50431 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.83□□□□□ -2.12
Shmt1P50431 Mir7021-201ENSMUST00000197026 63 ntBASIC1.83□□□□□ -2.12
Shmt1P50431 Mir107-201ENSMUST00000083660 87 ntBASIC1.83□□□□□ -2.12
Shmt1P50431 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Shmt1P50431 Gm22551-201ENSMUST00000157795 103 ntBASIC1.82□□□□□ -2.12
Shmt1P50431 Gm24076-201ENSMUST00000158179 94 ntBASIC1.82□□□□□ -2.12
Shmt1P50431 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.82□□□□□ -2.12
Shmt1P50431 Snord87-201ENSMUST00000175437 87 ntBASIC1.82□□□□□ -2.12
Shmt1P50431 Mir7683-201ENSMUST00000183842 61 ntBASIC1.82□□□□□ -2.12
Shmt1P50431 Gm25832-201ENSMUST00000104140 130 ntBASIC1.81□□□□□ -2.12
Shmt1P50431 Gm24907-201ENSMUST00000116932 128 ntBASIC1.81□□□□□ -2.12
Shmt1P50431 Traj61-201ENSMUST00000165025 72 ntBASIC1.81□□□□□ -2.12
Shmt1P50431 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.81□□□□□ -2.12
Shmt1P50431 Gm24947-201ENSMUST00000158334 110 ntBASIC1.8□□□□□ -2.12
Shmt1P50431 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.8□□□□□ -2.12
Shmt1P50431 Gm25820-201ENSMUST00000198589 127 ntBASIC1.8□□□□□ -2.12
Shmt1P50431 Gm44932-201ENSMUST00000206799 121 ntBASIC1.8□□□□□ -2.12
Shmt1P50431 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.8□□□□□ -2.12
Shmt1P50431 Gm26123-201ENSMUST00000083363 135 ntBASIC1.8□□□□□ -2.12
Shmt1P50431 Mir221-201ENSMUST00000083488 95 ntBASIC1.8□□□□□ -2.12
Shmt1P50431 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.8□□□□□ -2.12
Shmt1P50431 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Shmt1P50431 Gm25611-201ENSMUST00000104017 133 ntBASIC1.79□□□□□ -2.12
Shmt1P50431 Gm24984-201ENSMUST00000104454 133 ntBASIC1.79□□□□□ -2.12
Shmt1P50431 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.79□□□□□ -2.12
Shmt1P50431 Gm24649-201ENSMUST00000157106 134 ntBASIC1.79□□□□□ -2.12
Shmt1P50431 Mir3057-201ENSMUST00000175040 91 ntBASIC1.79□□□□□ -2.12
Shmt1P50431 Gm21885-201ENSMUST00000178891 327 ntBASIC1.79□□□□□ -2.12
Shmt1P50431 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.79□□□□□ -2.12
Shmt1P50431 Gm24523-201ENSMUST00000083965 132 ntBASIC1.79□□□□□ -2.12
Shmt1P50431 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.78□□□□□ -2.12
Shmt1P50431 Gm25680-201ENSMUST00000116917 126 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Gm22635-201ENSMUST00000116962 126 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Gm25887-201ENSMUST00000157777 84 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Gm25241-201ENSMUST00000174909 84 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Gm26217-201ENSMUST00000175212 84 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Gm18433-201ENSMUST00000192747 197 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Gm44807-201ENSMUST00000206115 154 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Gm24151-201ENSMUST00000082758 141 ntBASIC1.78□□□□□ -2.12
Shmt1P50431 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Shmt1P50431 Gm25610-201ENSMUST00000104016 129 ntBASIC1.77□□□□□ -2.13
Shmt1P50431 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.77□□□□□ -2.13
Shmt1P50431 Gm22815-201ENSMUST00000157451 62 ntBASIC1.77□□□□□ -2.13
Shmt1P50431 Gm26181-201ENSMUST00000157687 106 ntBASIC1.77□□□□□ -2.13
Shmt1P50431 Gm22425-201ENSMUST00000158532 138 ntBASIC1.77□□□□□ -2.13
Shmt1P50431 Gm25949-201ENSMUST00000175333 114 ntBASIC1.77□□□□□ -2.13
Shmt1P50431 Gm23375-201ENSMUST00000175407 83 ntBASIC1.77□□□□□ -2.13
Shmt1P50431 Gm5900-201ENSMUST00000179862 375 ntBASIC1.77□□□□□ -2.13
Shmt1P50431 Mir148b-201ENSMUST00000083626 97 ntBASIC1.77□□□□□ -2.13
Shmt1P50431 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Shmt1P50431 Gm25022-201ENSMUST00000102205 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Gm16265-201ENSMUST00000134558 108 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Gm22319-201ENSMUST00000157147 122 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Gm23384-201ENSMUST00000158593 103 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Gm24880-201ENSMUST00000158776 85 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 223.5 ms