Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1,26□□□□□ -2,21
Ercc3P49135 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1,26□□□□□ -2,21
Ercc3P49135 CT025630.1-201ENSMUST00000227901 172 ntBASIC1,26□□□□□ -2,21
Ercc3P49135 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,26□□□□□ -2,21
Ercc3P49135 Gm22373-201ENSMUST00000104584 89 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm25980-201ENSMUST00000157176 218 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm24250-201ENSMUST00000157320 135 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm23770-201ENSMUST00000178009 108 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm22832-201ENSMUST00000178022 108 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm23863-201ENSMUST00000178265 108 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm24828-201ENSMUST00000178507 108 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm23052-201ENSMUST00000178633 108 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm25729-201ENSMUST00000179050 108 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm25359-201ENSMUST00000179315 108 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm22624-201ENSMUST00000179913 108 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Mir468-201ENSMUST00000197332 78 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Gm42506-201ENSMUST00000202009 150 ntBASIC1,25□□□□□ -2,21
Ercc3P49135 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1,24□□□□□ -2,21
Ercc3P49135 Gm23320-201ENSMUST00000104462 127 ntBASIC1,24□□□□□ -2,21
Ercc3P49135 Gm16307-201ENSMUST00000161269 210 ntBASIC1,24□□□□□ -2,21
Ercc3P49135 Gm23375-201ENSMUST00000175407 83 ntBASIC1,24□□□□□ -2,21
Ercc3P49135 Gm24020-201ENSMUST00000180156 108 ntBASIC1,24□□□□□ -2,21
Ercc3P49135 Mir7663-201ENSMUST00000183950 61 ntBASIC1,24□□□□□ -2,21
Ercc3P49135 Gm24311-201ENSMUST00000082570 104 ntBASIC1,24□□□□□ -2,21
Ercc3P49135 Gm22809-201ENSMUST00000082743 156 ntBASIC1,24□□□□□ -2,21
Ercc3P49135 Mir547-201ENSMUST00000102051 78 ntBASIC1,23□□□□□ -2,21
Ercc3P49135 Gm26018-201ENSMUST00000104406 128 ntBASIC1,23□□□□□ -2,21
Ercc3P49135 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1,23□□□□□ -2,21
Ercc3P49135 Gm18665-201ENSMUST00000189783 270 ntBASIC1,23□□□□□ -2,21
Ercc3P49135 Gm18213-201ENSMUST00000207850 178 ntBASIC1,23□□□□□ -2,21
Ercc3P49135 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1,23□□□□□ -2,21
Ercc3P49135 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1,22□□□□□ -2,21
Ercc3P49135 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1,22□□□□□ -2,21
Ercc3P49135 Gm22105-201ENSMUST00000116734 116 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm14502-201ENSMUST00000118154 113 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm22999-201ENSMUST00000157082 88 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm22079-201ENSMUST00000157592 106 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm25241-201ENSMUST00000174909 84 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm26217-201ENSMUST00000175212 84 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm22565-201ENSMUST00000175540 69 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm44948-201ENSMUST00000209050 149 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm45268-201ENSMUST00000210046 370 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 AC141438.3-201ENSMUST00000215632 202 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm18502-201ENSMUST00000218679 199 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 AC160550.1-201ENSMUST00000228659 181 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm8508-201ENSMUST00000061226 363 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm23947-201ENSMUST00000093636 107 ntBASIC1,22□□□□□ -2,21
Ercc3P49135 Gm23859-201ENSMUST00000158383 64 ntBASIC1,21□□□□□ -2,22
Ercc3P49135 Mir1961-201ENSMUST00000158643 112 ntBASIC1,21□□□□□ -2,22
Ercc3P49135 Mir6928-201ENSMUST00000185166 70 ntBASIC1,21□□□□□ -2,22
Ercc3P49135 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1,21□□□□□ -2,22
Ercc3P49135 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1,2□□□□□ -2,22
Ercc3P49135 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1,2□□□□□ -2,22
Ercc3P49135 Mir6985-201ENSMUST00000184641 61 ntBASIC1,2□□□□□ -2,22
Ercc3P49135 Gm20118-201ENSMUST00000187207 162 ntBASIC1,2□□□□□ -2,22
Ercc3P49135 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1,2□□□□□ -2,22
Ercc3P49135 AC168880.2-201ENSMUST00000224488 201 ntBASIC1,2□□□□□ -2,22
Ercc3P49135 AC122769.2-201ENSMUST00000227248 302 ntBASIC1,2□□□□□ -2,22
Ercc3P49135 Gm25506-201ENSMUST00000104339 70 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 Gm22332-201ENSMUST00000158072 126 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 Gm22425-201ENSMUST00000158532 138 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 Mir3969-201ENSMUST00000197106 92 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 AL627387.1-201ENSMUST00000226063 250 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 AC151902.2-201ENSMUST00000226419 301 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 Gm25081-201ENSMUST00000082534 108 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 Gm23303-201ENSMUST00000082714 152 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 Gm25683-201ENSMUST00000083940 131 ntBASIC1,19□□□□□ -2,22
Ercc3P49135 Gm24342-201ENSMUST00000103907 104 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Gm25611-201ENSMUST00000104017 133 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Gm26412-201ENSMUST00000157666 55 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Gm23893-201ENSMUST00000158106 134 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Gm17528-201ENSMUST00000171026 239 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Gm27792-201ENSMUST00000184031 115 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Gm37545-201ENSMUST00000186512 148 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Gm44462-201ENSMUST00000199696 129 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Gm26123-201ENSMUST00000083363 135 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Mir411-201ENSMUST00000083543 82 ntBASIC1,18□□□□□ -2,22
Ercc3P49135 Snord90-201ENSMUST00000104568 111 ntBASIC1,17□□□□□ -2,22
Ercc3P49135 Gm22796-201ENSMUST00000157234 106 ntBASIC1,17□□□□□ -2,22
Ercc3P49135 Gm44458-201ENSMUST00000196594 143 ntBASIC1,17□□□□□ -2,22
Ercc3P49135 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1,17□□□□□ -2,22
Ercc3P49135 Mir344-201ENSMUST00000083634 95 ntBASIC1,17□□□□□ -2,22
Ercc3P49135 Snord35a-201ENSMUST00000083884 90 ntBASIC1,17□□□□□ -2,22
Ercc3P49135 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1,16□□□□□ -2,22
Ercc3P49135 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,16□□□□□ -2,22
Ercc3P49135 Gm11644-201ENSMUST00000119735 150 ntBASIC1,16□□□□□ -2,22
Ercc3P49135 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,16□□□□□ -2,22
Ercc3P49135 Gm44490-201ENSMUST00000198566 127 ntBASIC1,16□□□□□ -2,22
Ercc3P49135 AC165138.1-201ENSMUST00000226984 270 ntBASIC1,16□□□□□ -2,22
Ercc3P49135 Gm23445-201ENSMUST00000082800 107 ntBASIC1,16□□□□□ -2,22
Ercc3P49135 Gm10172-201ENSMUST00000085929 558 ntBASIC1,16□□□□□ -2,22
Ercc3P49135 Gm24271-201ENSMUST00000102327 111 ntBASIC1,15□□□□□ -2,23
Ercc3P49135 Mir669b-201ENSMUST00000102172 97 ntBASIC1,14□□□□□ -2,23
Ercc3P49135 Mir6377-201ENSMUST00000183760 114 ntBASIC1,14□□□□□ -2,23
Ercc3P49135 Gm38274-201ENSMUST00000195689 148 ntBASIC1,14□□□□□ -2,23
Ercc3P49135 Gm24461-201ENSMUST00000082735 103 ntBASIC1,14□□□□□ -2,23
Ercc3P49135 Mir200b-201ENSMUST00000083615 70 ntBASIC1,14□□□□□ -2,23
Ercc3P49135 Gm24263-201ENSMUST00000104059 107 ntBASIC1,13□□□□□ -2,23
Retrieved 100 of 76,532 protein–RNA pairs in 94,3 ms