Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.54□□□□□ -2.5
Cdx2P43241 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.54□□□□□ -2.5
Cdx2P43241 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.54□□□□□ -2.5
Cdx2P43241 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.54□□□□□ -2.5
Cdx2P43241 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.54□□□□□ -2.5
Cdx2P43241 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.54□□□□□ -2.5
Cdx2P43241 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.54□□□□□ -2.5
Cdx2P43241 Gm25414-201ENSMUST00000101814 107 ntBASIC-0.55□□□□□ -2.5
Cdx2P43241 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.55□□□□□ -2.5
Cdx2P43241 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.55□□□□□ -2.5
Cdx2P43241 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.55□□□□□ -2.5
Cdx2P43241 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.55□□□□□ -2.5
Cdx2P43241 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.55□□□□□ -2.5
Cdx2P43241 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Cdx2P43241 Rny3-201ENSMUST00000083011 102 ntBASIC-0.55□□□□□ -2.5
Cdx2P43241 Gm22365-201ENSMUST00000093750 117 ntBASIC-0.55□□□□□ -2.5
Cdx2P43241 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.56□□□□□ -2.5
Cdx2P43241 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.56□□□□□ -2.5
Cdx2P43241 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.56□□□□□ -2.5
Cdx2P43241 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.56□□□□□ -2.5
Cdx2P43241 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.56□□□□□ -2.5
Cdx2P43241 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.56□□□□□ -2.5
Cdx2P43241 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.57□□□□□ -2.5
Cdx2P43241 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.57□□□□□ -2.5
Cdx2P43241 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.57□□□□□ -2.5
Cdx2P43241 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.57□□□□□ -2.5
Cdx2P43241 Gm44149-201ENSMUST00000204256 226 ntBASIC-0.57□□□□□ -2.5
Cdx2P43241 Mir183-201ENSMUST00000083685 70 ntBASIC-0.57□□□□□ -2.5
Cdx2P43241 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.57□□□□□ -2.5
Cdx2P43241 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.58□□□□□ -2.5
Cdx2P43241 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.58□□□□□ -2.5
Cdx2P43241 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.58□□□□□ -2.5
Cdx2P43241 Gm25982-201ENSMUST00000157920 101 ntBASIC-0.58□□□□□ -2.5
Cdx2P43241 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.58□□□□□ -2.5
Cdx2P43241 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.58□□□□□ -2.5
Cdx2P43241 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.58□□□□□ -2.5
Cdx2P43241 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.58□□□□□ -2.5
Cdx2P43241 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.58□□□□□ -2.5
Cdx2P43241 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.58□□□□□ -2.5
Cdx2P43241 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
Cdx2P43241 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.59□□□□□ -2.5
Cdx2P43241 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.59□□□□□ -2.5
Cdx2P43241 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.59□□□□□ -2.5
Cdx2P43241 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.59□□□□□ -2.5
Cdx2P43241 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.59□□□□□ -2.5
Cdx2P43241 CT025603.4-201ENSMUST00000225777 413 ntBASIC-0.59□□□□□ -2.5
Cdx2P43241 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
Cdx2P43241 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm23022-201ENSMUST00000158768 180 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
Cdx2P43241 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.61□□□□□ -2.51
Cdx2P43241 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.61□□□□□ -2.51
Cdx2P43241 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.61□□□□□ -2.51
Cdx2P43241 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.61□□□□□ -2.51
Cdx2P43241 Snord42a-201ENSMUST00000082606 65 ntBASIC-0.61□□□□□ -2.51
Cdx2P43241 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.61□□□□□ -2.51
Cdx2P43241 Gm25970-201ENSMUST00000157165 86 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm43976-201ENSMUST00000203637 235 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm44687-201ENSMUST00000204975 235 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.62□□□□□ -2.51
Cdx2P43241 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm27723-201ENSMUST00000157398 63 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm22555-201ENSMUST00000157801 62 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 AL935138.1-201ENSMUST00000215309 196 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.63□□□□□ -2.51
Cdx2P43241 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.64□□□□□ -2.51
Cdx2P43241 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.64□□□□□ -2.51
Cdx2P43241 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.64□□□□□ -2.51
Cdx2P43241 Gm24192-201ENSMUST00000157978 145 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 160.3 ms