Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm38261-201ENSMUST00000192608 316 ntBASIC-1.67□□□□□ -2.68
HttP42859 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.68□□□□□ -2.68
HttP42859 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.68□□□□□ -2.68
HttP42859 Gm25223-201ENSMUST00000158200 110 ntBASIC-1.68□□□□□ -2.68
HttP42859 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.68□□□□□ -2.68
HttP42859 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.68□□□□□ -2.68
HttP42859 Gm14533-201ENSMUST00000117088 93 ntBASIC-1.68□□□□□ -2.68
HttP42859 Gm23291-201ENSMUST00000175611 78 ntBASIC-1.68□□□□□ -2.68
HttP42859 Gm12881-201ENSMUST00000121191 203 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm25619-201ENSMUST00000122621 104 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm24238-201ENSMUST00000157792 98 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm26022-201ENSMUST00000158663 108 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm23022-201ENSMUST00000158768 180 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm16053-201ENSMUST00000120511 188 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm44554-201ENSMUST00000208738 147 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm22455-201ENSMUST00000082580 71 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm25656-201ENSMUST00000158466 66 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm24618-201ENSMUST00000177718 94 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm23953-201ENSMUST00000178214 94 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm26332-201ENSMUST00000179813 94 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm22863-201ENSMUST00000180265 94 ntBASIC-1.69□□□□□ -2.68
HttP42859 Gm43324-201ENSMUST00000197482 289 ntBASIC-1.7□□□□□ -2.68
HttP42859 Gm43114-201ENSMUST00000198298 343 ntBASIC-1.7□□□□□ -2.68
HttP42859 AC112972.1-201ENSMUST00000227329 365 ntBASIC-1.7□□□□□ -2.68
HttP42859 Gm25684-201ENSMUST00000083941 107 ntBASIC-1.7□□□□□ -2.68
HttP42859 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.71□□□□□ -2.68
HttP42859 Mir450-2-201ENSMUST00000102444 69 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm24596-201ENSMUST00000122504 107 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm24064-201ENSMUST00000157486 106 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm25245-201ENSMUST00000178139 107 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm23610-201ENSMUST00000178659 107 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm23712-201ENSMUST00000179713 107 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm24870-201ENSMUST00000179897 107 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm22645-201ENSMUST00000180010 107 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm37796-201ENSMUST00000195327 134 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm42164-201ENSMUST00000198881 379 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm23628-201ENSMUST00000082464 173 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm23057-201ENSMUST00000082801 107 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm24448-201ENSMUST00000083979 107 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.71□□□□□ -2.68
HttP42859 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-1.71□□□□□ -2.68
HttP42859 Mir218-1-201ENSMUST00000083669 110 ntBASIC-1.71□□□□□ -2.68
HttP42859 Gm15077-201ENSMUST00000122344 362 ntBASIC-1.72□□□□□ -2.68
HttP42859 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
HttP42859 Gm25475-201ENSMUST00000082825 180 ntBASIC-1.72□□□□□ -2.68
HttP42859 Mir1951-201ENSMUST00000157981 89 ntBASIC-1.72□□□□□ -2.69
HttP42859 Gm23182-201ENSMUST00000158688 135 ntBASIC-1.72□□□□□ -2.69
HttP42859 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm25769-201ENSMUST00000158569 127 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm23194-201ENSMUST00000158813 105 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm29512-201ENSMUST00000185544 315 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm42677-201ENSMUST00000196363 127 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm25664-201ENSMUST00000157697 107 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC-1.73□□□□□ -2.69
HttP42859 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC-1.73□□□□□ -2.69
HttP42859 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC-1.73□□□□□ -2.69
HttP42859 Gm24969-201ENSMUST00000180331 79 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC-1.73□□□□□ -2.69
HttP42859 Gm23422-201ENSMUST00000102000 107 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm23900-201ENSMUST00000157569 108 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm24461-201ENSMUST00000082735 103 ntBASIC-1.73□□□□□ -2.69
HttP42859 Mir379-201ENSMUST00000083564 66 ntBASIC-1.73□□□□□ -2.69
HttP42859 Gm25275-201ENSMUST00000104297 129 ntBASIC-1.74□□□□□ -2.69
HttP42859 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-1.74□□□□□ -2.69
HttP42859 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-1.74□□□□□ -2.69
HttP42859 Gm25875-201ENSMUST00000104323 107 ntBASIC-1.74□□□□□ -2.69
HttP42859 Gm22638-201ENSMUST00000179674 107 ntBASIC-1.74□□□□□ -2.69
HttP42859 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-1.75□□□□□ -2.69
HttP42859 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.75□□□□□ -2.69
HttP42859 Gm25361-201ENSMUST00000179358 76 ntBASIC-1.75□□□□□ -2.69
HttP42859 Gm37832-201ENSMUST00000118935 189 ntBASIC-1.75□□□□□ -2.69
HttP42859 Gm26238-201ENSMUST00000175538 117 ntBASIC-1.75□□□□□ -2.69
HttP42859 Gm26177-201ENSMUST00000178683 107 ntBASIC-1.75□□□□□ -2.69
HttP42859 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.76□□□□□ -2.69
HttP42859 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.76□□□□□ -2.69
HttP42859 Gm22259-201ENSMUST00000178926 107 ntBASIC-1.76□□□□□ -2.69
HttP42859 Gm26365-201ENSMUST00000179177 94 ntBASIC-1.76□□□□□ -2.69
HttP42859 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.76□□□□□ -2.69
HttP42859 Gm26438-201ENSMUST00000082593 107 ntBASIC-1.76□□□□□ -2.69
HttP42859 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.76□□□□□ -2.69
HttP42859 Gm22883-201ENSMUST00000157376 106 ntBASIC-1.76□□□□□ -2.69
HttP42859 Snord2-201ENSMUST00000157899 69 ntBASIC-1.76□□□□□ -2.69
HttP42859 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC-1.77□□□□□ -2.69
HttP42859 Gm22290-201ENSMUST00000177655 107 ntBASIC-1.77□□□□□ -2.69
HttP42859 Gm23648-201ENSMUST00000180301 107 ntBASIC-1.77□□□□□ -2.69
HttP42859 Gm23845-201ENSMUST00000083834 152 ntBASIC-1.77□□□□□ -2.69
HttP42859 Mir485-201ENSMUST00000093620 73 ntBASIC-1.77□□□□□ -2.69
HttP42859 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.77□□□□□ -2.69
HttP42859 Gm13368-201ENSMUST00000122443 430 ntBASIC-1.77□□□□□ -2.69
HttP42859 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.77□□□□□ -2.69
HttP42859 Mir470-201ENSMUST00000093565 75 ntBASIC-1.77□□□□□ -2.69
HttP42859 Gm18242-201ENSMUST00000218455 542 ntBASIC-1.78□□□□□ -2.69
HttP42859 Gm25296-201ENSMUST00000082566 67 ntBASIC-1.78□□□□□ -2.69
HttP42859 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.78□□□□□ -2.69
HttP42859 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.78□□□□□ -2.69
HttP42859 Gm26479-201ENSMUST00000122620 106 ntBASIC-1.78□□□□□ -2.69
HttP42859 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC-1.78□□□□□ -2.69
HttP42859 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-1.78□□□□□ -2.69
Retrieved 100 of 76,532 protein–RNA pairs in 219.7 ms