Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm44458-201ENSMUST00000196594 143 ntBASIC0.44□□□□□ -2.34
Rom1P32958 Gm8508-201ENSMUST00000061226 363 ntBASIC0.44□□□□□ -2.34
Rom1P32958 Gm22576-201ENSMUST00000083733 104 ntBASIC0.44□□□□□ -2.34
Rom1P32958 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
Rom1P32958 Gm42795-201ENSMUST00000198847 76 ntBASIC0.43□□□□□ -2.34
Rom1P32958 Gm42506-201ENSMUST00000202009 150 ntBASIC0.43□□□□□ -2.34
Rom1P32958 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.43□□□□□ -2.34
Rom1P32958 Mir196b-201ENSMUST00000083509 85 ntBASIC0.43□□□□□ -2.34
Rom1P32958 Mir411-201ENSMUST00000083543 82 ntBASIC0.43□□□□□ -2.34
Rom1P32958 Gm22753-201ENSMUST00000083657 107 ntBASIC0.43□□□□□ -2.34
Rom1P32958 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Rom1P32958 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Rom1P32958 Gm23989-201ENSMUST00000117030 66 ntBASIC0.42□□□□□ -2.34
Rom1P32958 Gm14039-201ENSMUST00000118705 101 ntBASIC0.42□□□□□ -2.34
Rom1P32958 Gm22332-201ENSMUST00000158072 126 ntBASIC0.42□□□□□ -2.34
Rom1P32958 Gm22946-201ENSMUST00000158558 82 ntBASIC0.42□□□□□ -2.34
Rom1P32958 Mir6389-201ENSMUST00000183661 102 ntBASIC0.42□□□□□ -2.34
Rom1P32958 Gm28767-201ENSMUST00000188601 114 ntBASIC0.42□□□□□ -2.34
Rom1P32958 Gm22302-201ENSMUST00000082657 106 ntBASIC0.42□□□□□ -2.34
Rom1P32958 Gm22612-201ENSMUST00000158293 101 ntBASIC0.41□□□□□ -2.34
Rom1P32958 Gm24488-201ENSMUST00000179934 127 ntBASIC0.41□□□□□ -2.34
Rom1P32958 Gm25701-201ENSMUST00000179988 127 ntBASIC0.41□□□□□ -2.34
Rom1P32958 Gm26431-201ENSMUST00000180199 127 ntBASIC0.41□□□□□ -2.34
Rom1P32958 Mir6369-201ENSMUST00000183772 106 ntBASIC0.41□□□□□ -2.34
Rom1P32958 Gm22469-201ENSMUST00000104118 133 ntBASIC0.4□□□□□ -2.35
Rom1P32958 Gm24132-201ENSMUST00000104745 91 ntBASIC0.4□□□□□ -2.35
Rom1P32958 Gm24963-201ENSMUST00000157916 144 ntBASIC0.4□□□□□ -2.35
Rom1P32958 Gm26236-201ENSMUST00000175536 137 ntBASIC0.4□□□□□ -2.35
Rom1P32958 Mir6928-201ENSMUST00000185166 70 ntBASIC0.4□□□□□ -2.35
Rom1P32958 Gm37116-201ENSMUST00000195161 147 ntBASIC0.4□□□□□ -2.35
Rom1P32958 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Rom1P32958 Gm24030-201ENSMUST00000083931 164 ntBASIC0.4□□□□□ -2.35
Rom1P32958 Mir489-201ENSMUST00000093599 107 ntBASIC0.4□□□□□ -2.35
Rom1P32958 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Rom1P32958 Scarna9-201ENSMUST00000104318 70 ntBASIC0.39□□□□□ -2.35
Rom1P32958 Gm26156-201ENSMUST00000116999 123 ntBASIC0.39□□□□□ -2.35
Rom1P32958 Gm22079-201ENSMUST00000157592 106 ntBASIC0.39□□□□□ -2.35
Rom1P32958 Gm22557-201ENSMUST00000157804 102 ntBASIC0.39□□□□□ -2.35
Rom1P32958 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.39□□□□□ -2.35
Rom1P32958 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Gm25506-201ENSMUST00000104339 70 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Gm23772-201ENSMUST00000104433 102 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Gm25393-201ENSMUST00000157336 285 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Gm16550-201ENSMUST00000162550 126 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Mir7079-201ENSMUST00000184697 69 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Mir466e-201ENSMUST00000198862 84 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.38□□□□□ -2.35
Rom1P32958 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.38□□□□□ -2.35
Rom1P32958 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Gm24522-201ENSMUST00000083964 108 ntBASIC0.38□□□□□ -2.35
Rom1P32958 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Rom1P32958 Gm26303-201ENSMUST00000116845 119 ntBASIC0.37□□□□□ -2.35
Rom1P32958 Mir1899-201ENSMUST00000122798 96 ntBASIC0.37□□□□□ -2.35
Rom1P32958 Gm25300-201ENSMUST00000175284 84 ntBASIC0.37□□□□□ -2.35
Rom1P32958 Gm24575-201ENSMUST00000175502 77 ntBASIC0.37□□□□□ -2.35
Rom1P32958 Mir6375-201ENSMUST00000197176 95 ntBASIC0.37□□□□□ -2.35
Rom1P32958 Mir201-201ENSMUST00000083470 66 ntBASIC0.37□□□□□ -2.35
Rom1P32958 Mir10b-201ENSMUST00000083566 68 ntBASIC0.37□□□□□ -2.35
Rom1P32958 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Rom1P32958 Gm25496-201ENSMUST00000104430 120 ntBASIC0.36□□□□□ -2.35
Rom1P32958 Gm23991-201ENSMUST00000117033 93 ntBASIC0.36□□□□□ -2.35
Rom1P32958 Gm15654-201ENSMUST00000152660 300 ntBASIC0.36□□□□□ -2.35
Rom1P32958 Gm25715-201ENSMUST00000158627 125 ntBASIC0.36□□□□□ -2.35
Rom1P32958 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.36□□□□□ -2.35
Rom1P32958 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.36□□□□□ -2.35
Rom1P32958 Mir30f-201ENSMUST00000196073 92 ntBASIC0.36□□□□□ -2.35
Rom1P32958 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.36□□□□□ -2.35
Rom1P32958 Mir721-201ENSMUST00000200230 88 ntBASIC0.36□□□□□ -2.35
Rom1P32958 Gm23126-201ENSMUST00000104260 134 ntBASIC0.35□□□□□ -2.35
Rom1P32958 Gm25787-201ENSMUST00000104709 92 ntBASIC0.35□□□□□ -2.35
Rom1P32958 Gm22706-201ENSMUST00000157907 112 ntBASIC0.35□□□□□ -2.35
Rom1P32958 Gm22476-201ENSMUST00000158902 100 ntBASIC0.35□□□□□ -2.35
Rom1P32958 Gm24323-201ENSMUST00000175342 77 ntBASIC0.35□□□□□ -2.35
Rom1P32958 Gm37586-201ENSMUST00000193654 204 ntBASIC0.35□□□□□ -2.35
Rom1P32958 Gm44490-201ENSMUST00000198566 127 ntBASIC0.35□□□□□ -2.35
Rom1P32958 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Rom1P32958 Gm23258-201ENSMUST00000158319 106 ntBASIC0.34□□□□□ -2.36
Rom1P32958 Gm25901-201ENSMUST00000158494 130 ntBASIC0.34□□□□□ -2.36
Rom1P32958 Mir100-201ENSMUST00000175270 80 ntBASIC0.34□□□□□ -2.36
Rom1P32958 Mir7010-201ENSMUST00000183464 63 ntBASIC0.34□□□□□ -2.36
Rom1P32958 Mir7663-201ENSMUST00000183950 61 ntBASIC0.34□□□□□ -2.36
Rom1P32958 Gm27993-201ENSMUST00000184362 85 ntBASIC0.34□□□□□ -2.36
Rom1P32958 Gm10172-201ENSMUST00000085929 558 ntBASIC0.34□□□□□ -2.36
Rom1P32958 Gm22148-201ENSMUST00000104445 107 ntBASIC0.33□□□□□ -2.36
Rom1P32958 Gm24555-201ENSMUST00000104548 124 ntBASIC0.33□□□□□ -2.36
Rom1P32958 Gm23901-201ENSMUST00000157570 107 ntBASIC0.33□□□□□ -2.36
Rom1P32958 Gm22983-201ENSMUST00000158308 104 ntBASIC0.33□□□□□ -2.36
Rom1P32958 Gm44807-201ENSMUST00000206115 154 ntBASIC0.33□□□□□ -2.36
Rom1P32958 Gm45541-201ENSMUST00000210443 54 ntBASIC0.33□□□□□ -2.36
Rom1P32958 Snord60-201ENSMUST00000082834 78 ntBASIC0.33□□□□□ -2.36
Rom1P32958 Gm22759-201ENSMUST00000102276 96 ntBASIC0.32□□□□□ -2.36
Rom1P32958 Gm11248-201ENSMUST00000119568 201 ntBASIC0.32□□□□□ -2.36
Rom1P32958 Gm23080-201ENSMUST00000157846 103 ntBASIC0.32□□□□□ -2.36
Rom1P32958 Gm23301-201ENSMUST00000082713 65 ntBASIC0.32□□□□□ -2.36
Rom1P32958 Gm25482-201ENSMUST00000083225 107 ntBASIC0.32□□□□□ -2.36
Rom1P32958 Gm23347-201ENSMUST00000083823 82 ntBASIC0.32□□□□□ -2.36
Rom1P32958 Gm25985-201ENSMUST00000122677 107 ntBASIC0.31□□□□□ -2.36
Rom1P32958 Gm24238-201ENSMUST00000157792 98 ntBASIC0.31□□□□□ -2.36
Rom1P32958 Gm27934-201ENSMUST00000158795 63 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 140.9 ms