Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Mir532-201ENSMUST00000093630 96 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Snord69-201ENSMUST00000104024 80 ntBASIC0.45□□□□□ -2.34
Cd40lgP27548 Gm23838-201ENSMUST00000158067 162 ntBASIC0.45□□□□□ -2.34
Cd40lgP27548 Gm26360-201ENSMUST00000158872 103 ntBASIC0.45□□□□□ -2.34
Cd40lgP27548 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.45□□□□□ -2.34
Cd40lgP27548 Gm22466-201ENSMUST00000175278 69 ntBASIC0.45□□□□□ -2.34
Cd40lgP27548 Mir6375-201ENSMUST00000197176 95 ntBASIC0.45□□□□□ -2.34
Cd40lgP27548 Gm43944-201ENSMUST00000205220 120 ntBASIC0.45□□□□□ -2.34
Cd40lgP27548 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.45□□□□□ -2.34
Cd40lgP27548 Gm14838-201ENSMUST00000118913 248 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm6985-201ENSMUST00000121255 271 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm24250-201ENSMUST00000157320 135 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm24728-201ENSMUST00000158226 125 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm22431-201ENSMUST00000158545 107 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm23770-201ENSMUST00000178009 108 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm22832-201ENSMUST00000178022 108 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm23863-201ENSMUST00000178265 108 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm24828-201ENSMUST00000178507 108 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm23052-201ENSMUST00000178633 108 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm25729-201ENSMUST00000179050 108 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm25359-201ENSMUST00000179315 108 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm22624-201ENSMUST00000179913 108 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm25814-201ENSMUST00000082754 107 ntBASIC0.44□□□□□ -2.34
Cd40lgP27548 Gm26420-201ENSMUST00000104273 103 ntBASIC0.43□□□□□ -2.34
Cd40lgP27548 Gm24132-201ENSMUST00000104745 91 ntBASIC0.43□□□□□ -2.34
Cd40lgP27548 Gm22790-201ENSMUST00000157229 129 ntBASIC0.43□□□□□ -2.34
Cd40lgP27548 Gm24549-201ENSMUST00000158647 139 ntBASIC0.43□□□□□ -2.34
Cd40lgP27548 Gm16546-201ENSMUST00000159442 355 ntBASIC0.43□□□□□ -2.34
Cd40lgP27548 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.43□□□□□ -2.34
Cd40lgP27548 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.43□□□□□ -2.34
Cd40lgP27548 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Cd40lgP27548 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Gm24476-201ENSMUST00000157437 131 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Gm22557-201ENSMUST00000157804 102 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Gm26484-201ENSMUST00000158018 106 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Mir6390-201ENSMUST00000184405 129 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Gm37116-201ENSMUST00000195161 147 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Gm24522-201ENSMUST00000083964 108 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Mir489-201ENSMUST00000093599 107 ntBASIC0.42□□□□□ -2.34
Cd40lgP27548 Mir6389-201ENSMUST00000183661 102 ntBASIC0.41□□□□□ -2.34
Cd40lgP27548 Gm28767-201ENSMUST00000188601 114 ntBASIC0.41□□□□□ -2.34
Cd40lgP27548 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Cd40lgP27548 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.41□□□□□ -2.34
Cd40lgP27548 Gm8508-201ENSMUST00000061226 363 ntBASIC0.41□□□□□ -2.34
Cd40lgP27548 Mir411-201ENSMUST00000083543 82 ntBASIC0.41□□□□□ -2.34
Cd40lgP27548 Gm15289-201ENSMUST00000117793 244 ntBASIC0.4□□□□□ -2.35
Cd40lgP27548 Gm14039-201ENSMUST00000118705 101 ntBASIC0.4□□□□□ -2.35
Cd40lgP27548 Gm22612-201ENSMUST00000158293 101 ntBASIC0.4□□□□□ -2.35
Cd40lgP27548 Gm25444-201ENSMUST00000158999 113 ntBASIC0.4□□□□□ -2.35
Cd40lgP27548 Gm16550-201ENSMUST00000162550 126 ntBASIC0.4□□□□□ -2.35
Cd40lgP27548 Gm24415-201ENSMUST00000180218 107 ntBASIC0.4□□□□□ -2.35
Cd40lgP27548 Gm22576-201ENSMUST00000083733 104 ntBASIC0.4□□□□□ -2.35
Cd40lgP27548 Gm24555-201ENSMUST00000104548 124 ntBASIC0.39□□□□□ -2.35
Cd40lgP27548 Gm23989-201ENSMUST00000117030 66 ntBASIC0.39□□□□□ -2.35
Cd40lgP27548 Gm22946-201ENSMUST00000158558 82 ntBASIC0.39□□□□□ -2.35
Cd40lgP27548 Gm25633-201ENSMUST00000178565 107 ntBASIC0.39□□□□□ -2.35
Cd40lgP27548 Gm28724-201ENSMUST00000186149 625 ntBASIC0.39□□□□□ -2.35
Cd40lgP27548 Mir721-201ENSMUST00000200230 88 ntBASIC0.39□□□□□ -2.35
Cd40lgP27548 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Cd40lgP27548 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.39□□□□□ -2.35
Cd40lgP27548 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Gm14884-201ENSMUST00000120456 196 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Gm23258-201ENSMUST00000158319 106 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Gm24500-201ENSMUST00000158447 124 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Gm24772-201ENSMUST00000158507 110 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Gm22476-201ENSMUST00000158902 100 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Gm42795-201ENSMUST00000198847 76 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Gm22753-201ENSMUST00000083657 107 ntBASIC0.38□□□□□ -2.35
Cd40lgP27548 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm23901-201ENSMUST00000157570 107 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm24963-201ENSMUST00000157916 144 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm25300-201ENSMUST00000175284 84 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm22258-201ENSMUST00000177645 94 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm26032-201ENSMUST00000178535 94 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm25210-201ENSMUST00000178813 94 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm25157-201ENSMUST00000178914 94 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm22046-201ENSMUST00000179027 94 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm22941-201ENSMUST00000179630 94 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm24488-201ENSMUST00000179934 127 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm25701-201ENSMUST00000179988 127 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm25471-201ENSMUST00000180126 94 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm26431-201ENSMUST00000180199 127 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm37586-201ENSMUST00000193654 204 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm43432-201ENSMUST00000196352 121 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Mir201-201ENSMUST00000083470 66 ntBASIC0.37□□□□□ -2.35
Cd40lgP27548 Gm26303-201ENSMUST00000116845 119 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 Gm23672-201ENSMUST00000157471 107 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 Gm22079-201ENSMUST00000157592 106 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 Gm22332-201ENSMUST00000158072 126 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 Mir6928-201ENSMUST00000185166 70 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 AC161426.1-201ENSMUST00000214137 286 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.36□□□□□ -2.35
Cd40lgP27548 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 142.5 ms