Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm22624-201ENSMUST00000179913 108 ntBASIC0.55□□□□□ -2.32
BdnfP21237 Mir6390-201ENSMUST00000184405 129 ntBASIC0.55□□□□□ -2.32
BdnfP21237 Gm37330-201ENSMUST00000192606 153 ntBASIC0.55□□□□□ -2.32
BdnfP21237 Gm22302-201ENSMUST00000082657 106 ntBASIC0.55□□□□□ -2.32
BdnfP21237 Gm14039-201ENSMUST00000118705 101 ntBASIC0.54□□□□□ -2.32
BdnfP21237 Gm14884-201ENSMUST00000120456 196 ntBASIC0.54□□□□□ -2.32
BdnfP21237 Gm26360-201ENSMUST00000158872 103 ntBASIC0.54□□□□□ -2.32
BdnfP21237 Gm37997-201ENSMUST00000193515 267 ntBASIC0.54□□□□□ -2.32
BdnfP21237 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
BdnfP21237 Gm13577-201ENSMUST00000121365 205 ntBASIC0.53□□□□□ -2.32
BdnfP21237 Gm24238-201ENSMUST00000157792 98 ntBASIC0.53□□□□□ -2.32
BdnfP21237 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.53□□□□□ -2.32
BdnfP21237 Gm27993-201ENSMUST00000184362 85 ntBASIC0.53□□□□□ -2.32
BdnfP21237 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
BdnfP21237 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.53□□□□□ -2.32
BdnfP21237 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.53□□□□□ -2.32
BdnfP21237 Gm25588-201ENSMUST00000082501 140 ntBASIC0.53□□□□□ -2.32
BdnfP21237 Gm23301-201ENSMUST00000082713 65 ntBASIC0.53□□□□□ -2.32
BdnfP21237 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.52□□□□□ -2.33
BdnfP21237 Gm43432-201ENSMUST00000196352 121 ntBASIC0.52□□□□□ -2.33
BdnfP21237 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.52□□□□□ -2.33
BdnfP21237 Gm22287-201ENSMUST00000083197 107 ntBASIC0.52□□□□□ -2.33
BdnfP21237 Gm23126-201ENSMUST00000104260 134 ntBASIC0.51□□□□□ -2.33
BdnfP21237 Gm26420-201ENSMUST00000104273 103 ntBASIC0.51□□□□□ -2.33
BdnfP21237 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.51□□□□□ -2.33
BdnfP21237 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.51□□□□□ -2.33
BdnfP21237 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.51□□□□□ -2.33
BdnfP21237 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.51□□□□□ -2.33
BdnfP21237 Mir411-201ENSMUST00000083543 82 ntBASIC0.51□□□□□ -2.33
BdnfP21237 Gm23347-201ENSMUST00000083823 82 ntBASIC0.51□□□□□ -2.33
BdnfP21237 Gm25393-201ENSMUST00000157336 285 ntBASIC0.5□□□□□ -2.33
BdnfP21237 Gm27579-201ENSMUST00000158113 63 ntBASIC0.5□□□□□ -2.33
BdnfP21237 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.5□□□□□ -2.33
BdnfP21237 Gm44409-201ENSMUST00000198810 166 ntBASIC0.5□□□□□ -2.33
BdnfP21237 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
BdnfP21237 Gm8508-201ENSMUST00000061226 363 ntBASIC0.5□□□□□ -2.33
BdnfP21237 Mir200a-201ENSMUST00000083466 90 ntBASIC0.5□□□□□ -2.33
BdnfP21237 Gm22753-201ENSMUST00000083657 107 ntBASIC0.5□□□□□ -2.33
BdnfP21237 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.49□□□□□ -2.33
BdnfP21237 Gm25610-201ENSMUST00000104016 129 ntBASIC0.49□□□□□ -2.33
BdnfP21237 Gm23321-201ENSMUST00000104465 126 ntBASIC0.49□□□□□ -2.33
BdnfP21237 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
BdnfP21237 Gm25787-201ENSMUST00000104709 92 ntBASIC0.47□□□□□ -2.33
BdnfP21237 Gm25834-201ENSMUST00000158916 101 ntBASIC0.47□□□□□ -2.33
BdnfP21237 Gm24488-201ENSMUST00000179934 127 ntBASIC0.47□□□□□ -2.33
BdnfP21237 Gm25701-201ENSMUST00000179988 127 ntBASIC0.47□□□□□ -2.33
BdnfP21237 Gm26431-201ENSMUST00000180199 127 ntBASIC0.47□□□□□ -2.33
BdnfP21237 Gm37889-201ENSMUST00000194174 251 ntBASIC0.47□□□□□ -2.33
BdnfP21237 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.47□□□□□ -2.33
BdnfP21237 Gm24132-201ENSMUST00000104745 91 ntBASIC0.46□□□□□ -2.34
BdnfP21237 Gm26156-201ENSMUST00000116999 123 ntBASIC0.46□□□□□ -2.34
BdnfP21237 Gm23605-201ENSMUST00000157255 127 ntBASIC0.46□□□□□ -2.34
BdnfP21237 Gm26285-201ENSMUST00000177923 107 ntBASIC0.46□□□□□ -2.34
BdnfP21237 Gm27332-201ENSMUST00000184893 112 ntBASIC0.46□□□□□ -2.34
BdnfP21237 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.46□□□□□ -2.34
BdnfP21237 Gm23622-201ENSMUST00000082460 107 ntBASIC0.46□□□□□ -2.34
BdnfP21237 Gm23140-201ENSMUST00000082487 107 ntBASIC0.46□□□□□ -2.34
BdnfP21237 Gm24258-201ENSMUST00000083739 133 ntBASIC0.46□□□□□ -2.34
BdnfP21237 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
BdnfP21237 Gm22983-201ENSMUST00000158308 104 ntBASIC0.45□□□□□ -2.34
BdnfP21237 Mir7079-201ENSMUST00000184697 69 ntBASIC0.45□□□□□ -2.34
BdnfP21237 Mir219b-201ENSMUST00000198317 65 ntBASIC0.45□□□□□ -2.34
BdnfP21237 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
BdnfP21237 Gm23970-201ENSMUST00000083319 107 ntBASIC0.45□□□□□ -2.34
BdnfP21237 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.45□□□□□ -2.34
BdnfP21237 Gm22759-201ENSMUST00000102276 96 ntBASIC0.44□□□□□ -2.34
BdnfP21237 Gm15654-201ENSMUST00000152660 300 ntBASIC0.44□□□□□ -2.34
BdnfP21237 Gm23783-201ENSMUST00000157941 102 ntBASIC0.44□□□□□ -2.34
BdnfP21237 Gm43381-201ENSMUST00000198553 165 ntBASIC0.44□□□□□ -2.34
BdnfP21237 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.43□□□□□ -2.34
BdnfP21237 Mir100-201ENSMUST00000175270 80 ntBASIC0.43□□□□□ -2.34
BdnfP21237 Gm27943-201ENSMUST00000184844 116 ntBASIC0.43□□□□□ -2.34
BdnfP21237 Gm37586-201ENSMUST00000193654 204 ntBASIC0.43□□□□□ -2.34
BdnfP21237 Mir30f-201ENSMUST00000196073 92 ntBASIC0.43□□□□□ -2.34
BdnfP21237 Mir466e-201ENSMUST00000198862 84 ntBASIC0.43□□□□□ -2.34
BdnfP21237 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.43□□□□□ -2.34
BdnfP21237 Gm14626-201ENSMUST00000117619 216 ntBASIC0.42□□□□□ -2.34
BdnfP21237 Gm24761-201ENSMUST00000179589 127 ntBASIC0.42□□□□□ -2.34
BdnfP21237 Gm44807-201ENSMUST00000206115 154 ntBASIC0.42□□□□□ -2.34
BdnfP21237 Gm45541-201ENSMUST00000210443 54 ntBASIC0.42□□□□□ -2.34
BdnfP21237 Snord60-201ENSMUST00000082834 78 ntBASIC0.42□□□□□ -2.34
BdnfP21237 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
BdnfP21237 Mir669g-201ENSMUST00000116809 123 ntBASIC0.41□□□□□ -2.34
BdnfP21237 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.41□□□□□ -2.34
BdnfP21237 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
BdnfP21237 Gm22612-201ENSMUST00000158293 101 ntBASIC0.41□□□□□ -2.34
BdnfP21237 Gm22431-201ENSMUST00000158545 107 ntBASIC0.41□□□□□ -2.34
BdnfP21237 Gm22946-201ENSMUST00000158558 82 ntBASIC0.41□□□□□ -2.34
BdnfP21237 Gm42795-201ENSMUST00000198847 76 ntBASIC0.41□□□□□ -2.34
BdnfP21237 Mir721-201ENSMUST00000200230 88 ntBASIC0.41□□□□□ -2.34
BdnfP21237 Mir201-201ENSMUST00000083470 66 ntBASIC0.41□□□□□ -2.34
BdnfP21237 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.4□□□□□ -2.35
BdnfP21237 Gm22790-201ENSMUST00000157229 129 ntBASIC0.4□□□□□ -2.35
BdnfP21237 Gm27934-201ENSMUST00000158795 63 ntBASIC0.4□□□□□ -2.35
BdnfP21237 Gm22476-201ENSMUST00000158902 100 ntBASIC0.4□□□□□ -2.35
BdnfP21237 Gm14838-201ENSMUST00000118913 248 ntBASIC0.39□□□□□ -2.35
BdnfP21237 Gm22079-201ENSMUST00000157592 106 ntBASIC0.39□□□□□ -2.35
BdnfP21237 Scarna9-201ENSMUST00000104318 70 ntBASIC0.38□□□□□ -2.35
BdnfP21237 Gm25390-201ENSMUST00000157341 103 ntBASIC0.38□□□□□ -2.35
BdnfP21237 Gm23672-201ENSMUST00000157471 107 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms