Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23340-201ENSMUST00000158955 123 ntBASIC1.62□□□□□ -2.15
Col3a1P08121 Gm26466-201ENSMUST00000179615 79 ntBASIC1.62□□□□□ -2.15
Col3a1P08121 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.62□□□□□ -2.15
Col3a1P08121 Mir155-201ENSMUST00000083463 65 ntBASIC1.62□□□□□ -2.15
Col3a1P08121 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.62□□□□□ -2.15
Col3a1P08121 Gm26175-201ENSMUST00000083794 131 ntBASIC1.62□□□□□ -2.15
Col3a1P08121 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Col3a1P08121 Gm24468-201ENSMUST00000104489 104 ntBASIC1.61□□□□□ -2.15
Col3a1P08121 Gm22679-201ENSMUST00000116975 100 ntBASIC1.61□□□□□ -2.15
Col3a1P08121 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.61□□□□□ -2.15
Col3a1P08121 Gm28270-201ENSMUST00000188550 109 ntBASIC1.61□□□□□ -2.15
Col3a1P08121 Gm28328-201ENSMUST00000188869 109 ntBASIC1.61□□□□□ -2.15
Col3a1P08121 Gm19118-201ENSMUST00000222554 98 ntBASIC1.61□□□□□ -2.15
Col3a1P08121 Mir211-201ENSMUST00000083651 106 ntBASIC1.61□□□□□ -2.15
Col3a1P08121 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Col3a1P08121 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Col3a1P08121 Gm26420-201ENSMUST00000104273 103 ntBASIC1.6□□□□□ -2.15
Col3a1P08121 Gm25289-201ENSMUST00000122799 119 ntBASIC1.6□□□□□ -2.15
Col3a1P08121 Gm22963-201ENSMUST00000157960 91 ntBASIC1.6□□□□□ -2.15
Col3a1P08121 Gm28669-201ENSMUST00000188400 100 ntBASIC1.6□□□□□ -2.15
Col3a1P08121 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.6□□□□□ -2.15
Col3a1P08121 Mir344-201ENSMUST00000083634 95 ntBASIC1.6□□□□□ -2.15
Col3a1P08121 Gm24697-201ENSMUST00000083881 107 ntBASIC1.6□□□□□ -2.15
Col3a1P08121 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col3a1P08121 Gm26076-201ENSMUST00000104065 105 ntBASIC1.59□□□□□ -2.15
Col3a1P08121 Gm26105-201ENSMUST00000157253 190 ntBASIC1.59□□□□□ -2.15
Col3a1P08121 Gm22603-201ENSMUST00000157603 96 ntBASIC1.59□□□□□ -2.15
Col3a1P08121 Gm26029-201ENSMUST00000158659 132 ntBASIC1.59□□□□□ -2.15
Col3a1P08121 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.59□□□□□ -2.15
Col3a1P08121 Gm22827-201ENSMUST00000083766 107 ntBASIC1.59□□□□□ -2.15
Col3a1P08121 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.59□□□□□ -2.15
Col3a1P08121 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm24895-201ENSMUST00000122742 74 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Col3a1P08121 Gm22796-201ENSMUST00000157234 106 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm24913-201ENSMUST00000157286 107 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm22729-201ENSMUST00000158088 129 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm22163-201ENSMUST00000158408 135 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm25769-201ENSMUST00000158569 127 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm29535-201ENSMUST00000185723 109 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm28143-201ENSMUST00000191082 109 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm22454-201ENSMUST00000082583 107 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Gm24099-201ENSMUST00000083384 107 ntBASIC1.58□□□□□ -2.16
Col3a1P08121 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Col3a1P08121 Snord71-201ENSMUST00000104361 85 ntBASIC1.57□□□□□ -2.16
Col3a1P08121 Gm26150-201ENSMUST00000157426 151 ntBASIC1.57□□□□□ -2.16
Col3a1P08121 Gm22983-201ENSMUST00000158308 104 ntBASIC1.57□□□□□ -2.16
Col3a1P08121 Gm25771-201ENSMUST00000158565 144 ntBASIC1.57□□□□□ -2.16
Col3a1P08121 Gm44491-201ENSMUST00000196794 96 ntBASIC1.57□□□□□ -2.16
Col3a1P08121 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.57□□□□□ -2.16
Col3a1P08121 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.57□□□□□ -2.16
Col3a1P08121 Gm25878-201ENSMUST00000104327 93 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Mir293-201ENSMUST00000104841 80 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm26253-201ENSMUST00000122493 103 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm24632-201ENSMUST00000122770 323 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm22387-201ENSMUST00000158191 131 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm22638-201ENSMUST00000179674 107 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.56□□□□□ -2.16
Col3a1P08121 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Mir3096-201ENSMUST00000116685 71 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm22151-201ENSMUST00000116963 58 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm25558-201ENSMUST00000158083 106 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Rnu7-201ENSMUST00000158458 62 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm35736-201ENSMUST00000203681 313 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm26326-201ENSMUST00000083070 129 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm23507-201ENSMUST00000083078 107 ntBASIC1.56□□□□□ -2.16
Col3a1P08121 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col3a1P08121 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.55□□□□□ -2.16
Col3a1P08121 Gm23328-201ENSMUST00000157418 132 ntBASIC1.55□□□□□ -2.16
Col3a1P08121 Gm26415-201ENSMUST00000157673 292 ntBASIC1.55□□□□□ -2.16
Col3a1P08121 Mir3094-201ENSMUST00000175121 64 ntBASIC1.55□□□□□ -2.16
Col3a1P08121 Gm27446-201ENSMUST00000183963 89 ntBASIC1.55□□□□□ -2.16
Col3a1P08121 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.55□□□□□ -2.16
Col3a1P08121 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.55□□□□□ -2.16
Col3a1P08121 Gm24536-201ENSMUST00000083144 107 ntBASIC1.55□□□□□ -2.16
Col3a1P08121 Gm14671-201ENSMUST00000121790 262 ntBASIC1.54□□□□□ -2.16
Col3a1P08121 Mir1931-201ENSMUST00000158589 119 ntBASIC1.54□□□□□ -2.16
Col3a1P08121 Gm23090-201ENSMUST00000177331 78 ntBASIC1.54□□□□□ -2.16
Col3a1P08121 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.54□□□□□ -2.16
Col3a1P08121 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.54□□□□□ -2.16
Col3a1P08121 Gm25627-201ENSMUST00000084003 153 ntBASIC1.54□□□□□ -2.16
Col3a1P08121 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Col3a1P08121 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col3a1P08121 Gm14937-201ENSMUST00000119709 208 ntBASIC1.53□□□□□ -2.16
Col3a1P08121 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col3a1P08121 Mir6377-201ENSMUST00000183760 114 ntBASIC1.53□□□□□ -2.16
Col3a1P08121 Gm37557-201ENSMUST00000191640 139 ntBASIC1.53□□□□□ -2.16
Col3a1P08121 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.53□□□□□ -2.16
Col3a1P08121 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col3a1P08121 Gm22772-201ENSMUST00000104451 121 ntBASIC1.52□□□□□ -2.17
Col3a1P08121 Gm22279-201ENSMUST00000157200 93 ntBASIC1.52□□□□□ -2.17
Col3a1P08121 Gm22565-201ENSMUST00000175540 69 ntBASIC1.52□□□□□ -2.17
Col3a1P08121 Mir7663-201ENSMUST00000183950 61 ntBASIC1.52□□□□□ -2.17
Col3a1P08121 Gm9156-201ENSMUST00000189660 463 ntBASIC1.52□□□□□ -2.17
Col3a1P08121 Gm44962-201ENSMUST00000206460 279 ntBASIC1.52□□□□□ -2.17
Col3a1P08121 Snord118-201ENSMUST00000082965 135 ntBASIC1.52□□□□□ -2.17
Col3a1P08121 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.52□□□□□ -2.17
Col3a1P08121 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms