Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm26213-201ENSMUST00000158582 110 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Gm24877-201ENSMUST00000158779 116 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Gm25368-201ENSMUST00000158847 131 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Gm24366-201ENSMUST00000175383 86 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Snord87-201ENSMUST00000175437 87 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Gm24572-201ENSMUST00000175505 88 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Mir7683-201ENSMUST00000183842 61 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Mir3087-201ENSMUST00000199405 56 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Gm45429-201ENSMUST00000209527 172 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Mir107-201ENSMUST00000083660 87 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.65□□□□□ -2.15
Lmx1bO88609 Mir450b-201ENSMUST00000102095 82 ntBASIC1.64□□□□□ -2.15
Lmx1bO88609 Gm24238-201ENSMUST00000157792 98 ntBASIC1.64□□□□□ -2.15
Lmx1bO88609 Gm24076-201ENSMUST00000158179 94 ntBASIC1.64□□□□□ -2.15
Lmx1bO88609 Gm23208-201ENSMUST00000158666 127 ntBASIC1.64□□□□□ -2.15
Lmx1bO88609 Gm20391-201ENSMUST00000174722 106 ntBASIC1.64□□□□□ -2.15
Lmx1bO88609 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.64□□□□□ -2.15
Lmx1bO88609 Gm23060-201ENSMUST00000102345 109 ntBASIC1.63□□□□□ -2.15
Lmx1bO88609 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Lmx1bO88609 Gm25544-201ENSMUST00000122676 120 ntBASIC1.63□□□□□ -2.15
Lmx1bO88609 Gm23083-201ENSMUST00000157851 116 ntBASIC1.63□□□□□ -2.15
Lmx1bO88609 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.63□□□□□ -2.15
Lmx1bO88609 Gm24165-201ENSMUST00000082718 128 ntBASIC1.63□□□□□ -2.15
Lmx1bO88609 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm25090-201ENSMUST00000104000 132 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm22845-201ENSMUST00000157712 104 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm22638-201ENSMUST00000179674 107 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm24638-201ENSMUST00000179807 132 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm28270-201ENSMUST00000188550 109 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm28328-201ENSMUST00000188869 109 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm23507-201ENSMUST00000083078 107 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Gm22884-201ENSMUST00000083127 140 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Mir221-201ENSMUST00000083488 95 ntBASIC1.62□□□□□ -2.15
Lmx1bO88609 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Lmx1bO88609 Gm25393-201ENSMUST00000157336 285 ntBASIC1.61□□□□□ -2.15
Lmx1bO88609 Gm25978-201ENSMUST00000158698 90 ntBASIC1.61□□□□□ -2.15
Lmx1bO88609 Mir3057-201ENSMUST00000175040 91 ntBASIC1.61□□□□□ -2.15
Lmx1bO88609 Mir6379-201ENSMUST00000183392 115 ntBASIC1.61□□□□□ -2.15
Lmx1bO88609 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.61□□□□□ -2.15
Lmx1bO88609 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
Lmx1bO88609 Gm24468-201ENSMUST00000104489 104 ntBASIC1.6□□□□□ -2.15
Lmx1bO88609 Gm25279-201ENSMUST00000122608 133 ntBASIC1.6□□□□□ -2.15
Lmx1bO88609 Gm42795-201ENSMUST00000198847 76 ntBASIC1.6□□□□□ -2.15
Lmx1bO88609 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.6□□□□□ -2.15
Lmx1bO88609 Snora41-201ENSMUST00000082668 132 ntBASIC1.6□□□□□ -2.15
Lmx1bO88609 Gm24523-201ENSMUST00000083965 132 ntBASIC1.6□□□□□ -2.15
Lmx1bO88609 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Lmx1bO88609 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.59□□□□□ -2.15
Lmx1bO88609 Gm26421-201ENSMUST00000104279 132 ntBASIC1.59□□□□□ -2.15
Lmx1bO88609 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.59□□□□□ -2.15
Lmx1bO88609 Gm27722-201ENSMUST00000183908 76 ntBASIC1.59□□□□□ -2.15
Lmx1bO88609 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.59□□□□□ -2.15
Lmx1bO88609 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Lmx1bO88609 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Lmx1bO88609 Gm22772-201ENSMUST00000104451 121 ntBASIC1.58□□□□□ -2.16
Lmx1bO88609 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.58□□□□□ -2.16
Lmx1bO88609 Gm43865-201ENSMUST00000204721 127 ntBASIC1.58□□□□□ -2.16
Lmx1bO88609 Gm26123-201ENSMUST00000083363 135 ntBASIC1.58□□□□□ -2.16
Lmx1bO88609 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Lmx1bO88609 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Lmx1bO88609 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Lmx1bO88609 Gm22761-201ENSMUST00000102278 96 ntBASIC1.57□□□□□ -2.16
Lmx1bO88609 Gm14674-201ENSMUST00000117816 342 ntBASIC1.57□□□□□ -2.16
Lmx1bO88609 Gm24650-201ENSMUST00000157105 103 ntBASIC1.57□□□□□ -2.16
Lmx1bO88609 Gm22815-201ENSMUST00000157451 62 ntBASIC1.57□□□□□ -2.16
Lmx1bO88609 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Lmx1bO88609 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.57□□□□□ -2.16
Lmx1bO88609 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.57□□□□□ -2.16
Lmx1bO88609 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Lmx1bO88609 Gm25611-201ENSMUST00000104017 133 ntBASIC1.56□□□□□ -2.16
Lmx1bO88609 Gm24880-201ENSMUST00000158776 85 ntBASIC1.56□□□□□ -2.16
Lmx1bO88609 Gm25949-201ENSMUST00000175333 114 ntBASIC1.56□□□□□ -2.16
Lmx1bO88609 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Lmx1bO88609 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Lmx1bO88609 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Lmx1bO88609 Gm25610-201ENSMUST00000104016 129 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Snord78-201ENSMUST00000104032 66 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Gm22425-201ENSMUST00000158532 138 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Traj61-201ENSMUST00000165025 72 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Gm25241-201ENSMUST00000174909 84 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Gm26217-201ENSMUST00000175212 84 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Gm23375-201ENSMUST00000175407 83 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Gm37778-201ENSMUST00000191732 190 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Gm44807-201ENSMUST00000206115 154 ntBASIC1.55□□□□□ -2.16
Lmx1bO88609 Mir654-201ENSMUST00000104787 84 ntBASIC1.54□□□□□ -2.16
Lmx1bO88609 Mir3096-201ENSMUST00000116685 71 ntBASIC1.54□□□□□ -2.16
Lmx1bO88609 Gm22386-201ENSMUST00000158192 129 ntBASIC1.54□□□□□ -2.16
Lmx1bO88609 Gm23267-201ENSMUST00000178490 132 ntBASIC1.54□□□□□ -2.16
Lmx1bO88609 Gm25730-201ENSMUST00000178753 165 ntBASIC1.54□□□□□ -2.16
Lmx1bO88609 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.54□□□□□ -2.16
Lmx1bO88609 Gm44462-201ENSMUST00000199696 129 ntBASIC1.54□□□□□ -2.16
Lmx1bO88609 Gm25832-201ENSMUST00000104140 130 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Gm25680-201ENSMUST00000116917 126 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Gm22635-201ENSMUST00000116962 126 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Gm23172-201ENSMUST00000157160 124 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Gm25011-201ENSMUST00000158398 126 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Gm25658-201ENSMUST00000158472 128 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms