Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm24020-201ENSMUST00000180156 108 ntBASIC1.12□□□□□ -2.23
Capn1O35350 Gm27928-201ENSMUST00000183747 256 ntBASIC1.12□□□□□ -2.23
Capn1O35350 Gm27446-201ENSMUST00000183963 89 ntBASIC1.12□□□□□ -2.23
Capn1O35350 Mir6928-201ENSMUST00000185166 70 ntBASIC1.12□□□□□ -2.23
Capn1O35350 DQ267101-201ENSMUST00000082562 73 ntBASIC1.12□□□□□ -2.23
Capn1O35350 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Capn1O35350 Gm22373-201ENSMUST00000104584 89 ntBASIC1.11□□□□□ -2.23
Capn1O35350 Gm26301-201ENSMUST00000104813 95 ntBASIC1.11□□□□□ -2.23
Capn1O35350 Gm23838-201ENSMUST00000158067 162 ntBASIC1.11□□□□□ -2.23
Capn1O35350 Gm26358-201ENSMUST00000158215 97 ntBASIC1.11□□□□□ -2.23
Capn1O35350 Mir3079-201ENSMUST00000175428 90 ntBASIC1.11□□□□□ -2.23
Capn1O35350 Mir8119-201ENSMUST00000183371 129 ntBASIC1.11□□□□□ -2.23
Capn1O35350 Snord35a-201ENSMUST00000083884 90 ntBASIC1.11□□□□□ -2.23
Capn1O35350 Gm25274-201ENSMUST00000104296 135 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Gm22673-201ENSMUST00000104415 131 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Mir1904-201ENSMUST00000122702 80 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Gm26274-201ENSMUST00000157103 321 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Gm22332-201ENSMUST00000158072 126 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Capn1O35350 Gm20118-201ENSMUST00000187207 162 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Gm44322-201ENSMUST00000196830 115 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.1□□□□□ -2.23
Capn1O35350 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.1□□□□□ -2.23
Capn1O35350 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Gm8508-201ENSMUST00000061226 363 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Gm24624-201ENSMUST00000082617 164 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Snord61-201ENSMUST00000083176 71 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Mir196b-201ENSMUST00000083509 85 ntBASIC1.1□□□□□ -2.23
Capn1O35350 Gm22796-201ENSMUST00000157234 106 ntBASIC1.09□□□□□ -2.23
Capn1O35350 Gm23328-201ENSMUST00000157418 132 ntBASIC1.09□□□□□ -2.23
Capn1O35350 Gm23337-201ENSMUST00000158959 118 ntBASIC1.09□□□□□ -2.23
Capn1O35350 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Capn1O35350 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.08□□□□□ -2.24
Capn1O35350 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Gm22485-201ENSMUST00000157990 109 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Gm25976-201ENSMUST00000158695 130 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Mir1954-201ENSMUST00000175595 86 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Gm27974-201ENSMUST00000183415 105 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Mir7091-201ENSMUST00000184075 79 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Gm42795-201ENSMUST00000198847 76 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Gm43944-201ENSMUST00000205220 120 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Gm44807-201ENSMUST00000206115 154 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Mir30a-201ENSMUST00000083471 71 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Mir101a-201ENSMUST00000083517 83 ntBASIC1.07□□□□□ -2.24
Capn1O35350 Gm25980-201ENSMUST00000157176 218 ntBASIC1.06□□□□□ -2.24
Capn1O35350 Gm23763-201ENSMUST00000158345 60 ntBASIC1.06□□□□□ -2.24
Capn1O35350 Mir15a-201ENSMUST00000175266 84 ntBASIC1.06□□□□□ -2.24
Capn1O35350 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.06□□□□□ -2.24
Capn1O35350 Gm44338-201ENSMUST00000198614 110 ntBASIC1.06□□□□□ -2.24
Capn1O35350 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Capn1O35350 Gm25110-201ENSMUST00000116684 121 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm25775-201ENSMUST00000116716 121 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm24795-201ENSMUST00000116737 121 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm25171-201ENSMUST00000116926 121 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm23988-201ENSMUST00000117034 122 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm24747-201ENSMUST00000157835 87 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm24942-201ENSMUST00000158328 114 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm25768-201ENSMUST00000158570 98 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm26363-201ENSMUST00000158866 83 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Mir6364-201ENSMUST00000183396 86 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Gm22980-201ENSMUST00000082608 70 ntBASIC1.05□□□□□ -2.24
Capn1O35350 Snord90-201ENSMUST00000104568 111 ntBASIC1.04□□□□□ -2.24
Capn1O35350 Gm11644-201ENSMUST00000119735 150 ntBASIC1.04□□□□□ -2.24
Capn1O35350 Gm24777-201ENSMUST00000157644 107 ntBASIC1.04□□□□□ -2.24
Capn1O35350 Gm25715-201ENSMUST00000158627 125 ntBASIC1.04□□□□□ -2.24
Capn1O35350 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.04□□□□□ -2.24
Capn1O35350 Gm22887-201ENSMUST00000178586 107 ntBASIC1.04□□□□□ -2.24
Capn1O35350 Gm38323-201ENSMUST00000192450 210 ntBASIC1.04□□□□□ -2.24
Capn1O35350 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.04□□□□□ -2.24
Capn1O35350 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.04□□□□□ -2.24
Capn1O35350 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.04□□□□□ -2.24
Capn1O35350 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Capn1O35350 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.03□□□□□ -2.24
Capn1O35350 Gm25170-201ENSMUST00000104191 129 ntBASIC1.03□□□□□ -2.24
Capn1O35350 Gm14946-201ENSMUST00000119859 296 ntBASIC1.03□□□□□ -2.24
Capn1O35350 Gm17020-201ENSMUST00000172274 274 ntBASIC1.03□□□□□ -2.24
Capn1O35350 Gm27792-201ENSMUST00000184031 115 ntBASIC1.03□□□□□ -2.24
Capn1O35350 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.03□□□□□ -2.24
Capn1O35350 Gm25136-201ENSMUST00000083253 115 ntBASIC1.03□□□□□ -2.24
Capn1O35350 Gm22149-201ENSMUST00000104442 136 ntBASIC1.02□□□□□ -2.25
Capn1O35350 Gm25968-201ENSMUST00000157167 100 ntBASIC1.02□□□□□ -2.25
Capn1O35350 Gm24054-201ENSMUST00000158619 105 ntBASIC1.02□□□□□ -2.25
Capn1O35350 Mir1933-201ENSMUST00000158930 88 ntBASIC1.02□□□□□ -2.25
Capn1O35350 Mir7663-201ENSMUST00000183950 61 ntBASIC1.02□□□□□ -2.25
Capn1O35350 Mir7657-201ENSMUST00000196051 57 ntBASIC1.02□□□□□ -2.25
Capn1O35350 Mir33-201ENSMUST00000083531 69 ntBASIC1.02□□□□□ -2.25
Capn1O35350 Gm23947-201ENSMUST00000093636 107 ntBASIC1.02□□□□□ -2.25
Capn1O35350 Gm14626-201ENSMUST00000117619 216 ntBASIC1.01□□□□□ -2.25
Capn1O35350 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.01□□□□□ -2.25
Capn1O35350 Gm15654-201ENSMUST00000152660 300 ntBASIC1.01□□□□□ -2.25
Capn1O35350 Gm27699-201ENSMUST00000183553 180 ntBASIC1.01□□□□□ -2.25
Capn1O35350 Gm27656-201ENSMUST00000185055 80 ntBASIC1.01□□□□□ -2.25
Capn1O35350 Gm24527-201ENSMUST00000082920 107 ntBASIC1.01□□□□□ -2.25
Capn1O35350 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.01□□□□□ -2.25
Capn1O35350 Gm44489-201ENSMUST00000104619 97 ntBASIC1□□□□□ -2.25
Capn1O35350 Gm23340-201ENSMUST00000158955 123 ntBASIC1□□□□□ -2.25
Capn1O35350 Gm25069-201ENSMUST00000175238 86 ntBASIC1□□□□□ -2.25
Capn1O35350 Mir30f-201ENSMUST00000196073 92 ntBASIC1□□□□□ -2.25
Capn1O35350 Snord32a-201ENSMUST00000083285 83 ntBASIC1□□□□□ -2.25
Capn1O35350 Gm26011-201ENSMUST00000104410 104 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 162 ms