Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Mir3061-201ENSMUST00000175129 91 ntBASIC1.71□□□□□ -2.14
Nedd9O35177 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.71□□□□□ -2.14
Nedd9O35177 Gm25987-201ENSMUST00000083234 107 ntBASIC1.71□□□□□ -2.14
Nedd9O35177 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.7□□□□□ -2.14
Nedd9O35177 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Nedd9O35177 Gm24894-201ENSMUST00000122744 118 ntBASIC1.7□□□□□ -2.14
Nedd9O35177 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.7□□□□□ -2.14
Nedd9O35177 Gm23299-201ENSMUST00000082708 79 ntBASIC1.7□□□□□ -2.14
Nedd9O35177 Gm26123-201ENSMUST00000083363 135 ntBASIC1.7□□□□□ -2.14
Nedd9O35177 Gm26080-201ENSMUST00000104069 131 ntBASIC1.69□□□□□ -2.14
Nedd9O35177 Gm25044-201ENSMUST00000158603 104 ntBASIC1.69□□□□□ -2.14
Nedd9O35177 Gm23375-201ENSMUST00000175407 83 ntBASIC1.69□□□□□ -2.14
Nedd9O35177 Gm23267-201ENSMUST00000178490 132 ntBASIC1.69□□□□□ -2.14
Nedd9O35177 Gm25646-201ENSMUST00000178527 79 ntBASIC1.69□□□□□ -2.14
Nedd9O35177 Mir6351-201ENSMUST00000183826 99 ntBASIC1.69□□□□□ -2.14
Nedd9O35177 Gm42844-201ENSMUST00000200355 112 ntBASIC1.69□□□□□ -2.14
Nedd9O35177 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.69□□□□□ -2.14
Nedd9O35177 Gm25992-201ENSMUST00000102437 109 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Mir544-201ENSMUST00000103813 78 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm25611-201ENSMUST00000104017 133 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm12086-201ENSMUST00000120863 228 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm24262-201ENSMUST00000157431 144 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm23083-201ENSMUST00000157851 116 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm22425-201ENSMUST00000158532 138 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Nedd9O35177 Mir6377-201ENSMUST00000183760 114 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm28794-201ENSMUST00000185276 136 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm37330-201ENSMUST00000192606 153 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm22509-201ENSMUST00000082775 107 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Snord14a-201ENSMUST00000082807 87 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Gm24406-201ENSMUST00000083026 128 ntBASIC1.68□□□□□ -2.14
Nedd9O35177 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Nedd9O35177 Gm12013-201ENSMUST00000121971 155 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Gm24902-201ENSMUST00000158126 123 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Gm25241-201ENSMUST00000174909 84 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Gm26217-201ENSMUST00000175212 84 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Gm28383-201ENSMUST00000187563 139 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Gm28256-201ENSMUST00000188953 139 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Gm28559-201ENSMUST00000190532 139 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Gm18433-201ENSMUST00000192747 197 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Gm25038-201ENSMUST00000082928 130 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Mir466-201ENSMUST00000093591 73 ntBASIC1.67□□□□□ -2.14
Nedd9O35177 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.67□□□□□ -2.14
Nedd9O35177 Gm25068-201ENSMUST00000103895 110 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Gm24234-201ENSMUST00000104316 107 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Gm22196-201ENSMUST00000116865 109 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Gm25011-201ENSMUST00000158398 126 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Gm25838-201ENSMUST00000158920 120 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Gm22070-201ENSMUST00000178475 107 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Mir7675-201ENSMUST00000184262 58 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Gm44462-201ENSMUST00000199696 129 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 mt-Tf-201ENSMUST00000082387 68 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Mir369-201ENSMUST00000083627 79 ntBASIC1.66□□□□□ -2.14
Nedd9O35177 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
Nedd9O35177 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Nedd9O35177 Gm25541-201ENSMUST00000116888 126 ntBASIC1.65□□□□□ -2.15
Nedd9O35177 Gm24913-201ENSMUST00000157286 107 ntBASIC1.65□□□□□ -2.15
Nedd9O35177 Gm22200-201ENSMUST00000158614 67 ntBASIC1.65□□□□□ -2.15
Nedd9O35177 Snora24-201ENSMUST00000174989 130 ntBASIC1.65□□□□□ -2.15
Nedd9O35177 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
Nedd9O35177 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Nedd9O35177 Gm22815-201ENSMUST00000157451 62 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 Gm26181-201ENSMUST00000157687 106 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 Gm22802-201ENSMUST00000175621 89 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 Gm44962-201ENSMUST00000206460 279 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 Gm23095-201ENSMUST00000083446 107 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 Gm25684-201ENSMUST00000083941 107 ntBASIC1.64□□□□□ -2.15
Nedd9O35177 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Nedd9O35177 Gm25831-201ENSMUST00000158924 163 ntBASIC1.63□□□□□ -2.15
Nedd9O35177 Gm26498-201ENSMUST00000177799 79 ntBASIC1.63□□□□□ -2.15
Nedd9O35177 Gm23714-201ENSMUST00000179259 105 ntBASIC1.63□□□□□ -2.15
Nedd9O35177 Gm26230-201ENSMUST00000180141 79 ntBASIC1.63□□□□□ -2.15
Nedd9O35177 Gm27248-201ENSMUST00000184004 166 ntBASIC1.63□□□□□ -2.15
Nedd9O35177 Gm44807-201ENSMUST00000206115 154 ntBASIC1.63□□□□□ -2.15
Nedd9O35177 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Nedd9O35177 Gm25753-201ENSMUST00000116792 121 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.62□□□□□ -2.15
Nedd9O35177 Gm25889-201ENSMUST00000157775 107 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm23967-201ENSMUST00000175062 78 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm25098-201ENSMUST00000177580 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm23356-201ENSMUST00000177610 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm24027-201ENSMUST00000177611 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm22511-201ENSMUST00000177628 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm22630-201ENSMUST00000177781 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm23560-201ENSMUST00000177782 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm25462-201ENSMUST00000177833 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm26059-201ENSMUST00000177865 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm22255-201ENSMUST00000177933 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm25146-201ENSMUST00000177976 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm25523-201ENSMUST00000178044 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm24585-201ENSMUST00000178104 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm22627-201ENSMUST00000178127 79 ntBASIC1.62□□□□□ -2.15
Nedd9O35177 Gm22912-201ENSMUST00000178242 79 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms