Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ccdc9bA3KGF9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc9bA3KGF9 Mir3057-201ENSMUST00000175040 91 ntBASIC2.16□□□□□ -2.06
Ccdc9bA3KGF9 Gm43977-201ENSMUST00000203970 189 ntBASIC2.16□□□□□ -2.06
Ccdc9bA3KGF9 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.16□□□□□ -2.06
Ccdc9bA3KGF9 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.16□□□□□ -2.06
Ccdc9bA3KGF9 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc9bA3KGF9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc9bA3KGF9 Gm23652-201ENSMUST00000116752 107 ntBASIC2.15□□□□□ -2.07
Ccdc9bA3KGF9 Gm25329-201ENSMUST00000158041 126 ntBASIC2.15□□□□□ -2.07
Ccdc9bA3KGF9 Gm24177-201ENSMUST00000158927 131 ntBASIC2.15□□□□□ -2.07
Ccdc9bA3KGF9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ccdc9bA3KGF9 Gm23950-201ENSMUST00000104026 129 ntBASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Gm26077-201ENSMUST00000104064 123 ntBASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Gm26051-201ENSMUST00000104642 93 ntBASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Gm22947-201ENSMUST00000158559 91 ntBASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Gm25976-201ENSMUST00000158695 130 ntBASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Snora24-201ENSMUST00000174989 130 ntBASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Gm43626-201ENSMUST00000198575 162 ntBASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Gm8031-201ENSMUST00000213430 626 ntBASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc9bA3KGF9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc9bA3KGF9 Gm22752-201ENSMUST00000102083 109 ntBASIC2.13□□□□□ -2.07
Ccdc9bA3KGF9 Gm22200-201ENSMUST00000158614 67 ntBASIC2.13□□□□□ -2.07
Ccdc9bA3KGF9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.13□□□□□ -2.07
Ccdc9bA3KGF9 Gm37557-201ENSMUST00000191640 139 ntBASIC2.13□□□□□ -2.07
Ccdc9bA3KGF9 Mir7232-201ENSMUST00000197929 74 ntBASIC2.13□□□□□ -2.07
Ccdc9bA3KGF9 Gm43512-201ENSMUST00000198495 176 ntBASIC2.13□□□□□ -2.07
Ccdc9bA3KGF9 Gm15654-201ENSMUST00000152660 300 ntBASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Mir5104-201ENSMUST00000175319 94 ntBASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Gm25730-201ENSMUST00000178753 165 ntBASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Mir7026-201ENSMUST00000184384 67 ntBASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Gm43722-201ENSMUST00000196054 124 ntBASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Gm43206-201ENSMUST00000197990 114 ntBASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc9bA3KGF9 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 Gm22554-201ENSMUST00000157798 147 ntBASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 Gm23351-201ENSMUST00000158427 125 ntBASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 Gm44408-201ENSMUST00000200205 66 ntBASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 Mir7217-201ENSMUST00000200304 62 ntBASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 Gm25851-201ENSMUST00000082794 107 ntBASIC2.11□□□□□ -2.07
Ccdc9bA3KGF9 Gm22729-201ENSMUST00000158088 129 ntBASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Snord50a-201ENSMUST00000178154 72 ntBASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Gm24463-201ENSMUST00000178417 72 ntBASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Gm27517-201ENSMUST00000184347 236 ntBASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Gm25796-201ENSMUST00000082645 163 ntBASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Mir222-201ENSMUST00000083537 79 ntBASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ccdc9bA3KGF9 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Mir802-201ENSMUST00000103258 97 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Gm14882-201ENSMUST00000117216 218 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Gm12941-201ENSMUST00000117934 220 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Gm22706-201ENSMUST00000157907 112 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Mir3061-201ENSMUST00000175129 91 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Gm23289-201ENSMUST00000175615 108 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Gm21885-201ENSMUST00000178891 327 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Gm25038-201ENSMUST00000082928 130 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 Gm23790-201ENSMUST00000083013 107 ntBASIC2.09□□□□□ -2.07
Ccdc9bA3KGF9 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.09□□□□□ -2.08
Ccdc9bA3KGF9 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Ccdc9bA3KGF9 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.08□□□□□ -2.08
Ccdc9bA3KGF9 Gm22403-201ENSMUST00000174919 84 ntBASIC2.08□□□□□ -2.08
Ccdc9bA3KGF9 Gm29535-201ENSMUST00000185723 109 ntBASIC2.08□□□□□ -2.08
Ccdc9bA3KGF9 Gm28143-201ENSMUST00000191082 109 ntBASIC2.08□□□□□ -2.08
Ccdc9bA3KGF9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.08□□□□□ -2.08
Ccdc9bA3KGF9 Gm43865-201ENSMUST00000204721 127 ntBASIC2.08□□□□□ -2.08
Ccdc9bA3KGF9 Gm26109-201ENSMUST00000083970 70 ntBASIC2.08□□□□□ -2.08
Ccdc9bA3KGF9 Gm23010-201ENSMUST00000104151 126 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 Gm23838-201ENSMUST00000158067 162 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 Gm25370-201ENSMUST00000158159 94 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 Gm20118-201ENSMUST00000187207 162 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 Gm28256-201ENSMUST00000188953 139 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 Gm28559-201ENSMUST00000190532 139 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 Mir3069-201ENSMUST00000198802 65 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 Snord80-201ENSMUST00000083801 81 ntBASIC2.07□□□□□ -2.08
Ccdc9bA3KGF9 Mir20b-201ENSMUST00000102087 80 ntBASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm25094-201ENSMUST00000103992 131 ntBASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm24900-201ENSMUST00000158128 134 ntBASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm22089-201ENSMUST00000158336 102 ntBASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc9bA3KGF9 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms