Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.25□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.25□□□□□ -2.45
Trav11A0A0B4J1J9 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.25□□□□□ -2.45
Trav11A0A0B4J1J9 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.25□□□□□ -2.45
Trav11A0A0B4J1J9 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.25□□□□□ -2.45
Trav11A0A0B4J1J9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm22080-201ENSMUST00000157591 106 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.26□□□□□ -2.45
Trav11A0A0B4J1J9 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.27□□□□□ -2.45
Trav11A0A0B4J1J9 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.27□□□□□ -2.45
Trav11A0A0B4J1J9 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.27□□□□□ -2.45
Trav11A0A0B4J1J9 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Mir7039-201ENSMUST00000183852 85 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.28□□□□□ -2.45
Trav11A0A0B4J1J9 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.29□□□□□ -2.46
Trav11A0A0B4J1J9 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.29□□□□□ -2.46
Trav11A0A0B4J1J9 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.29□□□□□ -2.46
Trav11A0A0B4J1J9 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.29□□□□□ -2.46
Trav11A0A0B4J1J9 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.29□□□□□ -2.46
Trav11A0A0B4J1J9 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC-0.29□□□□□ -2.46
Trav11A0A0B4J1J9 Mir672-201ENSMUST00000102331 100 ntBASIC-0.3□□□□□ -2.46
Trav11A0A0B4J1J9 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.3□□□□□ -2.46
Trav11A0A0B4J1J9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
Trav11A0A0B4J1J9 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.3□□□□□ -2.46
Trav11A0A0B4J1J9 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.3□□□□□ -2.46
Trav11A0A0B4J1J9 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.3□□□□□ -2.46
Trav11A0A0B4J1J9 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.31□□□□□ -2.46
Trav11A0A0B4J1J9 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.31□□□□□ -2.46
Trav11A0A0B4J1J9 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.31□□□□□ -2.46
Trav11A0A0B4J1J9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.31□□□□□ -2.46
Trav11A0A0B4J1J9 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.31□□□□□ -2.46
Trav11A0A0B4J1J9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.31□□□□□ -2.46
Trav11A0A0B4J1J9 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.31□□□□□ -2.46
Trav11A0A0B4J1J9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Gm22709-201ENSMUST00000116893 111 ntBASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.32□□□□□ -2.46
Trav11A0A0B4J1J9 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.33□□□□□ -2.46
Trav11A0A0B4J1J9 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.33□□□□□ -2.46
Trav11A0A0B4J1J9 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.33□□□□□ -2.46
Trav11A0A0B4J1J9 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.33□□□□□ -2.46
Trav11A0A0B4J1J9 Gm26159-201ENSMUST00000158968 104 ntBASIC-0.33□□□□□ -2.46
Trav11A0A0B4J1J9 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.33□□□□□ -2.46
Trav11A0A0B4J1J9 Snora75-201ENSMUST00000082903 133 ntBASIC-0.33□□□□□ -2.46
Trav11A0A0B4J1J9 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.34□□□□□ -2.46
Trav11A0A0B4J1J9 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.34□□□□□ -2.46
Trav11A0A0B4J1J9 Gm22242-201ENSMUST00000175224 118 ntBASIC-0.34□□□□□ -2.46
Trav11A0A0B4J1J9 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.34□□□□□ -2.46
Trav11A0A0B4J1J9 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.34□□□□□ -2.46
Trav11A0A0B4J1J9 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.34□□□□□ -2.46
Trav11A0A0B4J1J9 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.34□□□□□ -2.46
Trav11A0A0B4J1J9 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.34□□□□□ -2.46
Trav11A0A0B4J1J9 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Gm43505-201ENSMUST00000200579 139 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Mir384-201ENSMUST00000083565 88 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.35□□□□□ -2.47
Trav11A0A0B4J1J9 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.36□□□□□ -2.47
Trav11A0A0B4J1J9 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.36□□□□□ -2.47
Trav11A0A0B4J1J9 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.36□□□□□ -2.47
Trav11A0A0B4J1J9 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.36□□□□□ -2.47
Trav11A0A0B4J1J9 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.36□□□□□ -2.47
Trav11A0A0B4J1J9 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.36□□□□□ -2.47
Trav11A0A0B4J1J9 Mir875-201ENSMUST00000104698 78 ntBASIC-0.37□□□□□ -2.47
Trav11A0A0B4J1J9 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.37□□□□□ -2.47
Trav11A0A0B4J1J9 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.37□□□□□ -2.47
Trav11A0A0B4J1J9 Mir191-201ENSMUST00000196210 74 ntBASIC-0.37□□□□□ -2.47
Trav11A0A0B4J1J9 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.37□□□□□ -2.47
Trav11A0A0B4J1J9 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms