Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm22482-201ENSMUST00000122563 359 ntBASIC0.85□□□□□ -2.27
H2afb2S4R1M3 Gm25838-201ENSMUST00000158920 120 ntBASIC0.85□□□□□ -2.27
H2afb2S4R1M3 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.85□□□□□ -2.27
H2afb2S4R1M3 Gm5002-201ENSMUST00000207145 223 ntBASIC0.85□□□□□ -2.27
H2afb2S4R1M3 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.85□□□□□ -2.27
H2afb2S4R1M3 Mir196b-201ENSMUST00000083509 85 ntBASIC0.85□□□□□ -2.27
H2afb2S4R1M3 Mir27b-201ENSMUST00000083541 73 ntBASIC0.85□□□□□ -2.27
H2afb2S4R1M3 Gm22576-201ENSMUST00000083733 104 ntBASIC0.85□□□□□ -2.27
H2afb2S4R1M3 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm24750-201ENSMUST00000157843 104 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm24131-201ENSMUST00000158539 107 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm16404-201ENSMUST00000177739 468 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm14598-201ENSMUST00000180109 468 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm14625-201ENSMUST00000180231 468 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Mir6377-201ENSMUST00000183760 114 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm27420-201ENSMUST00000183823 79 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Mir7059-201ENSMUST00000184825 59 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm37116-201ENSMUST00000195161 147 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm44320-201ENSMUST00000199276 86 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Gm44976-201ENSMUST00000205543 261 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.84□□□□□ -2.27
H2afb2S4R1M3 Mir1298-201ENSMUST00000116681 98 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Gm23328-201ENSMUST00000157418 132 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Gm24401-201ENSMUST00000157868 91 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Gm24808-201ENSMUST00000157993 118 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Gm25715-201ENSMUST00000158627 125 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Gm17020-201ENSMUST00000172274 274 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Snora24-201ENSMUST00000174989 130 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Gm26097-201ENSMUST00000179642 93 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Gm22704-201ENSMUST00000083027 137 ntBASIC0.83□□□□□ -2.28
H2afb2S4R1M3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
H2afb2S4R1M3 Gm25011-201ENSMUST00000158398 126 ntBASIC0.82□□□□□ -2.28
H2afb2S4R1M3 Gm22699-201ENSMUST00000175376 105 ntBASIC0.82□□□□□ -2.28
H2afb2S4R1M3 Gm23375-201ENSMUST00000175407 83 ntBASIC0.82□□□□□ -2.28
H2afb2S4R1M3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.82□□□□□ -2.28
H2afb2S4R1M3 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.82□□□□□ -2.28
H2afb2S4R1M3 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.82□□□□□ -2.28
H2afb2S4R1M3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm26420-201ENSMUST00000104273 103 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm23990-201ENSMUST00000117031 117 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm24250-201ENSMUST00000157320 135 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm22079-201ENSMUST00000157592 106 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm25882-201ENSMUST00000157784 85 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm22551-201ENSMUST00000157795 103 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm25599-201ENSMUST00000157816 103 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm23080-201ENSMUST00000157846 103 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm22139-201ENSMUST00000158747 105 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm23770-201ENSMUST00000178009 108 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm22832-201ENSMUST00000178022 108 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm23863-201ENSMUST00000178265 108 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm24828-201ENSMUST00000178507 108 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm23052-201ENSMUST00000178633 108 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm25729-201ENSMUST00000179050 108 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm25359-201ENSMUST00000179315 108 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm22624-201ENSMUST00000179913 108 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Gm25401-201ENSMUST00000082975 106 ntBASIC0.81□□□□□ -2.28
H2afb2S4R1M3 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Gm22989-201ENSMUST00000158313 86 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Gm24221-201ENSMUST00000158833 313 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Mir7663-201ENSMUST00000183950 61 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Gm27894-201ENSMUST00000184177 92 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Mir7009-201ENSMUST00000184519 64 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Gm37997-201ENSMUST00000193515 267 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Gm18213-201ENSMUST00000207850 178 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Gm25136-201ENSMUST00000083253 115 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Gm26123-201ENSMUST00000083363 135 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Mir201-201ENSMUST00000083470 66 ntBASIC0.8□□□□□ -2.28
H2afb2S4R1M3 Gm22689-201ENSMUST00000102452 110 ntBASIC0.79□□□□□ -2.28
H2afb2S4R1M3 Gm23766-201ENSMUST00000103894 80 ntBASIC0.79□□□□□ -2.28
H2afb2S4R1M3 Mir1961-201ENSMUST00000158643 112 ntBASIC0.79□□□□□ -2.28
H2afb2S4R1M3 Gm23714-201ENSMUST00000179259 105 ntBASIC0.79□□□□□ -2.28
H2afb2S4R1M3 Gm38323-201ENSMUST00000192450 210 ntBASIC0.79□□□□□ -2.28
H2afb2S4R1M3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.79□□□□□ -2.28
H2afb2S4R1M3 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
H2afb2S4R1M3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Gm26082-201ENSMUST00000104070 127 ntBASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Gm22332-201ENSMUST00000158072 126 ntBASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Gm24054-201ENSMUST00000158619 105 ntBASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Mir6928-201ENSMUST00000185166 70 ntBASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Gm18665-201ENSMUST00000189783 270 ntBASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Gm42795-201ENSMUST00000198847 76 ntBASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Gm24311-201ENSMUST00000082570 104 ntBASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.78□□□□□ -2.28
H2afb2S4R1M3 Gm14502-201ENSMUST00000118154 113 ntBASIC0.77□□□□□ -2.29
H2afb2S4R1M3 Gm22796-201ENSMUST00000157234 106 ntBASIC0.77□□□□□ -2.29
H2afb2S4R1M3 Gm23893-201ENSMUST00000158106 134 ntBASIC0.77□□□□□ -2.29
H2afb2S4R1M3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.77□□□□□ -2.29
H2afb2S4R1M3 Gm20386-201ENSMUST00000174010 132 ntBASIC0.77□□□□□ -2.29
H2afb2S4R1M3 Gm24106-201ENSMUST00000175498 127 ntBASIC0.77□□□□□ -2.29
H2afb2S4R1M3 Mir6240-201ENSMUST00000184281 117 ntBASIC0.77□□□□□ -2.29
H2afb2S4R1M3 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.77□□□□□ -2.29
H2afb2S4R1M3 Gm25506-201ENSMUST00000104339 70 ntBASIC0.76□□□□□ -2.29
H2afb2S4R1M3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.76□□□□□ -2.29
H2afb2S4R1M3 Gm25364-201ENSMUST00000158851 107 ntBASIC0.76□□□□□ -2.29
H2afb2S4R1M3 Gm27792-201ENSMUST00000184031 115 ntBASIC0.76□□□□□ -2.29
H2afb2S4R1M3 Gm22105-201ENSMUST00000116734 116 ntBASIC0.75□□□□□ -2.29
H2afb2S4R1M3 Gm22515-201ENSMUST00000158273 305 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 177.6 ms