Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm18291-201ENSMUST00000190791 301 ntBASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.22□□□□□ -2.6
Six6Q9QZ28 mt-Tc-201ENSMUST00000082400 66 ntBASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm23515-201ENSMUST00000082829 107 ntBASIC-1.22□□□□□ -2.6
Six6Q9QZ28 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.23□□□□□ -2.61
Six6Q9QZ28 Gm23536-201ENSMUST00000157541 134 ntBASIC-1.23□□□□□ -2.61
Six6Q9QZ28 Gm23025-201ENSMUST00000158769 111 ntBASIC-1.23□□□□□ -2.61
Six6Q9QZ28 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
Six6Q9QZ28 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.23□□□□□ -2.61
Six6Q9QZ28 Mir350-201ENSMUST00000083639 99 ntBASIC-1.23□□□□□ -2.61
Six6Q9QZ28 Gm25859-201ENSMUST00000083710 91 ntBASIC-1.23□□□□□ -2.61
Six6Q9QZ28 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Gm22031-201ENSMUST00000116945 126 ntBASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Gm15654-201ENSMUST00000152660 300 ntBASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Gm27659-201ENSMUST00000183472 98 ntBASIC-1.24□□□□□ -2.61
Six6Q9QZ28 AC132615.1-201ENSMUST00000213873 255 ntBASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Gm26437-201ENSMUST00000082595 105 ntBASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.24□□□□□ -2.61
Six6Q9QZ28 Gm24276-201ENSMUST00000102181 110 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm25610-201ENSMUST00000104016 129 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm14007-201ENSMUST00000118288 210 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm22885-201ENSMUST00000157410 107 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm24129-201ENSMUST00000158537 97 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm23571-201ENSMUST00000180073 127 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm23148-201ENSMUST00000180367 107 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm25258-201ENSMUST00000083049 107 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm22578-201ENSMUST00000083730 107 ntBASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.25□□□□□ -2.61
Six6Q9QZ28 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.26□□□□□ -2.61
Six6Q9QZ28 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.26□□□□□ -2.61
Six6Q9QZ28 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.26□□□□□ -2.61
Six6Q9QZ28 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.27□□□□□ -2.61
Six6Q9QZ28 Mir376a-201ENSMUST00000197584 68 ntBASIC-1.27□□□□□ -2.61
Six6Q9QZ28 Gm44726-201ENSMUST00000203427 217 ntBASIC-1.27□□□□□ -2.61
Six6Q9QZ28 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.28□□□□□ -2.61
Six6Q9QZ28 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.28□□□□□ -2.61
Six6Q9QZ28 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.28□□□□□ -2.61
Six6Q9QZ28 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.28□□□□□ -2.61
Six6Q9QZ28 Gm23625-201ENSMUST00000082457 100 ntBASIC-1.28□□□□□ -2.61
Six6Q9QZ28 Snord67-201ENSMUST00000104033 111 ntBASIC-1.29□□□□□ -2.62
Six6Q9QZ28 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.29□□□□□ -2.62
Six6Q9QZ28 Gm24901-201ENSMUST00000158125 110 ntBASIC-1.29□□□□□ -2.62
Six6Q9QZ28 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.29□□□□□ -2.62
Six6Q9QZ28 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.29□□□□□ -2.62
Six6Q9QZ28 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-1.29□□□□□ -2.62
Six6Q9QZ28 Gm24315-201ENSMUST00000177835 127 ntBASIC-1.29□□□□□ -2.62
Six6Q9QZ28 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.29□□□□□ -2.62
Six6Q9QZ28 Gm23142-201ENSMUST00000101848 105 ntBASIC-1.3□□□□□ -2.62
Six6Q9QZ28 Gm26240-201ENSMUST00000101893 105 ntBASIC-1.3□□□□□ -2.62
Six6Q9QZ28 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.3□□□□□ -2.62
Six6Q9QZ28 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.3□□□□□ -2.62
Six6Q9QZ28 Mir465d-201ENSMUST00000196314 58 ntBASIC-1.3□□□□□ -2.62
Six6Q9QZ28 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.3□□□□□ -2.62
Six6Q9QZ28 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.3□□□□□ -2.62
Six6Q9QZ28 AC192333.2-201ENSMUST00000224771 196 ntBASIC-1.3□□□□□ -2.62
Six6Q9QZ28 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.3□□□□□ -2.62
Six6Q9QZ28 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.31□□□□□ -2.62
Six6Q9QZ28 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.31□□□□□ -2.62
Six6Q9QZ28 Gm13801-201ENSMUST00000120750 160 ntBASIC-1.31□□□□□ -2.62
Six6Q9QZ28 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.31□□□□□ -2.62
Six6Q9QZ28 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.31□□□□□ -2.62
Six6Q9QZ28 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.31□□□□□ -2.62
Six6Q9QZ28 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.31□□□□□ -2.62
Six6Q9QZ28 Gm44615-201ENSMUST00000206548 358 ntBASIC-1.31□□□□□ -2.62
Six6Q9QZ28 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-1.31□□□□□ -2.62
Six6Q9QZ28 Gm25163-201ENSMUST00000158905 104 ntBASIC-1.32□□□□□ -2.62
Six6Q9QZ28 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.32□□□□□ -2.62
Six6Q9QZ28 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
Six6Q9QZ28 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Gm22553-201ENSMUST00000157797 295 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Gm23016-201ENSMUST00000158431 62 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Snora26-201ENSMUST00000175614 121 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Gm22166-201ENSMUST00000178419 121 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Gm23288-201ENSMUST00000179213 121 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 163.8 ms