Protein–RNA interactions for Protein: Q9QY53

Nphp1, Nephrocystin-1, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp1Q9QY53 Gm22469-201ENSMUST00000104118 133 ntBASIC0.45□□□□□ -2.34
Nphp1Q9QY53 Gm23321-201ENSMUST00000104465 126 ntBASIC0.45□□□□□ -2.34
Nphp1Q9QY53 Gm24728-201ENSMUST00000158226 125 ntBASIC0.45□□□□□ -2.34
Nphp1Q9QY53 Gm23763-201ENSMUST00000158345 60 ntBASIC0.45□□□□□ -2.34
Nphp1Q9QY53 Gm24549-201ENSMUST00000158647 139 ntBASIC0.45□□□□□ -2.34
Nphp1Q9QY53 Gm44828-201ENSMUST00000203745 106 ntBASIC0.45□□□□□ -2.34
Nphp1Q9QY53 Gm43944-201ENSMUST00000205220 120 ntBASIC0.45□□□□□ -2.34
Nphp1Q9QY53 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.45□□□□□ -2.34
Nphp1Q9QY53 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Mir541-201ENSMUST00000102097 90 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Gm6897-201ENSMUST00000117714 138 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Gm15289-201ENSMUST00000117793 244 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Gm6952-201ENSMUST00000118629 159 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Gm14758-201ENSMUST00000119104 138 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Gm14884-201ENSMUST00000120456 196 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Gm24476-201ENSMUST00000157437 131 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Gm28020-201ENSMUST00000157739 67 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Gm25771-201ENSMUST00000158565 144 ntBASIC0.44□□□□□ -2.34
Nphp1Q9QY53 Snord19-201ENSMUST00000104609 76 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Gm22815-201ENSMUST00000157451 62 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Gm25494-201ENSMUST00000158143 100 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Gm16546-201ENSMUST00000159442 355 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Gm27476-201ENSMUST00000183366 104 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Mir6905-201ENSMUST00000184228 70 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Gm26326-201ENSMUST00000083070 129 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Gm23969-201ENSMUST00000083324 74 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Gm22744-201ENSMUST00000083444 65 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Mir186-201ENSMUST00000083497 71 ntBASIC0.43□□□□□ -2.34
Nphp1Q9QY53 Snord100-201ENSMUST00000116836 74 ntBASIC0.42□□□□□ -2.34
Nphp1Q9QY53 Gm25393-201ENSMUST00000157336 285 ntBASIC0.42□□□□□ -2.34
Nphp1Q9QY53 Gm25015-201ENSMUST00000158400 128 ntBASIC0.42□□□□□ -2.34
Nphp1Q9QY53 Gm25300-201ENSMUST00000175284 84 ntBASIC0.42□□□□□ -2.34
Nphp1Q9QY53 Gm23047-201ENSMUST00000177661 94 ntBASIC0.42□□□□□ -2.34
Nphp1Q9QY53 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.42□□□□□ -2.34
Nphp1Q9QY53 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.42□□□□□ -2.34
Nphp1Q9QY53 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Nphp1Q9QY53 Gm14567-201ENSMUST00000117155 174 ntBASIC0.41□□□□□ -2.34
Nphp1Q9QY53 Gm23892-201ENSMUST00000158105 130 ntBASIC0.41□□□□□ -2.34
Nphp1Q9QY53 Gm25464-201ENSMUST00000175481 107 ntBASIC0.41□□□□□ -2.34
Nphp1Q9QY53 Gm44989-201ENSMUST00000204749 217 ntBASIC0.41□□□□□ -2.34
Nphp1Q9QY53 Gm26303-201ENSMUST00000116845 119 ntBASIC0.4□□□□□ -2.35
Nphp1Q9QY53 Gm23989-201ENSMUST00000117030 66 ntBASIC0.4□□□□□ -2.35
Nphp1Q9QY53 Gm24729-201ENSMUST00000158225 137 ntBASIC0.4□□□□□ -2.35
Nphp1Q9QY53 Gm24500-201ENSMUST00000158447 124 ntBASIC0.4□□□□□ -2.35
Nphp1Q9QY53 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.4□□□□□ -2.35
Nphp1Q9QY53 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Nphp1Q9QY53 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Nphp1Q9QY53 Gm22145-201ENSMUST00000157396 148 ntBASIC0.39□□□□□ -2.35
Nphp1Q9QY53 Gm25769-201ENSMUST00000158569 127 ntBASIC0.39□□□□□ -2.35
Nphp1Q9QY53 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.39□□□□□ -2.35
Nphp1Q9QY53 Gm19572-201ENSMUST00000214326 338 ntBASIC0.39□□□□□ -2.35
Nphp1Q9QY53 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.38□□□□□ -2.35
Nphp1Q9QY53 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Nphp1Q9QY53 Gm12686-201ENSMUST00000120546 397 ntBASIC0.38□□□□□ -2.35
Nphp1Q9QY53 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.38□□□□□ -2.35
Nphp1Q9QY53 Gm23838-201ENSMUST00000158067 162 ntBASIC0.38□□□□□ -2.35
Nphp1Q9QY53 Gm24762-201ENSMUST00000083689 104 ntBASIC0.38□□□□□ -2.35
Nphp1Q9QY53 Gm25509-201ENSMUST00000116985 106 ntBASIC0.37□□□□□ -2.35
Nphp1Q9QY53 Gm26279-201ENSMUST00000157095 102 ntBASIC0.37□□□□□ -2.35
Nphp1Q9QY53 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Nphp1Q9QY53 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.37□□□□□ -2.35
Nphp1Q9QY53 Gm8508-201ENSMUST00000061226 363 ntBASIC0.37□□□□□ -2.35
Nphp1Q9QY53 Gm22576-201ENSMUST00000083733 104 ntBASIC0.37□□□□□ -2.35
Nphp1Q9QY53 Mir489-201ENSMUST00000093599 107 ntBASIC0.37□□□□□ -2.35
Nphp1Q9QY53 Gm14039-201ENSMUST00000118705 101 ntBASIC0.36□□□□□ -2.35
Nphp1Q9QY53 Gm26152-201ENSMUST00000157427 101 ntBASIC0.36□□□□□ -2.35
Nphp1Q9QY53 Gm22983-201ENSMUST00000158308 104 ntBASIC0.36□□□□□ -2.35
Nphp1Q9QY53 Gm25364-201ENSMUST00000158851 107 ntBASIC0.36□□□□□ -2.35
Nphp1Q9QY53 Mir6390-201ENSMUST00000184405 129 ntBASIC0.36□□□□□ -2.35
Nphp1Q9QY53 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.36□□□□□ -2.35
Nphp1Q9QY53 Mir219b-201ENSMUST00000198317 65 ntBASIC0.36□□□□□ -2.35
Nphp1Q9QY53 Mir344-201ENSMUST00000083634 95 ntBASIC0.36□□□□□ -2.35
Nphp1Q9QY53 Gm14001-201ENSMUST00000118847 247 ntBASIC0.35□□□□□ -2.35
Nphp1Q9QY53 Gm22557-201ENSMUST00000157804 102 ntBASIC0.35□□□□□ -2.35
Nphp1Q9QY53 Gm25718-201ENSMUST00000158632 118 ntBASIC0.35□□□□□ -2.35
Nphp1Q9QY53 Gm24415-201ENSMUST00000180218 107 ntBASIC0.35□□□□□ -2.35
Nphp1Q9QY53 Mir7010-201ENSMUST00000183464 63 ntBASIC0.35□□□□□ -2.35
Nphp1Q9QY53 Gm3702-201ENSMUST00000211754 346 ntBASIC0.35□□□□□ -2.35
Nphp1Q9QY53 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.35□□□□□ -2.35
Nphp1Q9QY53 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.35□□□□□ -2.35
Nphp1Q9QY53 Mir669o-201ENSMUST00000103898 96 ntBASIC0.34□□□□□ -2.36
Nphp1Q9QY53 Gm22101-201ENSMUST00000157928 103 ntBASIC0.34□□□□□ -2.36
Nphp1Q9QY53 Gm25444-201ENSMUST00000158999 113 ntBASIC0.34□□□□□ -2.36
Nphp1Q9QY53 Gm23567-201ENSMUST00000178005 107 ntBASIC0.34□□□□□ -2.36
Nphp1Q9QY53 Gm28767-201ENSMUST00000188601 114 ntBASIC0.34□□□□□ -2.36
Nphp1Q9QY53 Gm45541-201ENSMUST00000210443 54 ntBASIC0.34□□□□□ -2.36
Nphp1Q9QY53 Gm25588-201ENSMUST00000082501 140 ntBASIC0.34□□□□□ -2.36
Nphp1Q9QY53 Gm26420-201ENSMUST00000104273 103 ntBASIC0.33□□□□□ -2.36
Nphp1Q9QY53 Gm11936-201ENSMUST00000118323 160 ntBASIC0.33□□□□□ -2.36
Nphp1Q9QY53 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.33□□□□□ -2.36
Nphp1Q9QY53 Gm23003-201ENSMUST00000179948 107 ntBASIC0.33□□□□□ -2.36
Nphp1Q9QY53 Gm37997-201ENSMUST00000193515 267 ntBASIC0.33□□□□□ -2.36
Nphp1Q9QY53 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.33□□□□□ -2.36
Nphp1Q9QY53 Gm22753-201ENSMUST00000083657 107 ntBASIC0.33□□□□□ -2.36
Nphp1Q9QY53 Gm24342-201ENSMUST00000103907 104 ntBASIC0.32□□□□□ -2.36
Nphp1Q9QY53 Gm25749-201ENSMUST00000175485 111 ntBASIC0.32□□□□□ -2.36
Nphp1Q9QY53 Gm37330-201ENSMUST00000192606 153 ntBASIC0.32□□□□□ -2.36
Nphp1Q9QY53 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.32□□□□□ -2.36
Nphp1Q9QY53 Rny1-201ENSMUST00000083767 112 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms