Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.09□□□□□ -2.42
Trem1Q9JKE2 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.09□□□□□ -2.42
Trem1Q9JKE2 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.09□□□□□ -2.42
Trem1Q9JKE2 Mir1197-201ENSMUST00000117037 120 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm22080-201ENSMUST00000157591 106 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm26447-201ENSMUST00000082448 129 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Rny1-201ENSMUST00000083767 112 ntBASIC-0.1□□□□□ -2.43
Trem1Q9JKE2 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm22709-201ENSMUST00000116893 111 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm10222-201ENSMUST00000088336 294 ntBASIC-0.11□□□□□ -2.43
Trem1Q9JKE2 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.12□□□□□ -2.43
Trem1Q9JKE2 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm22149-201ENSMUST00000104442 136 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Snord60-201ENSMUST00000082834 78 ntBASIC-0.13□□□□□ -2.43
Trem1Q9JKE2 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm26159-201ENSMUST00000158968 104 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.14□□□□□ -2.43
Trem1Q9JKE2 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Snord100-201ENSMUST00000116836 74 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Gm43505-201ENSMUST00000200579 139 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Snord85-201ENSMUST00000083262 73 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Trem1Q9JKE2 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm22242-201ENSMUST00000175224 118 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.16□□□□□ -2.44
Trem1Q9JKE2 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.17□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 331.9 ms