Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm26393-201ENSMUST00000157625 129 ntBASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 Gm22097-201ENSMUST00000157929 278 ntBASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.75□□□□□ -2.53
Trem3Q9JKE1 Mir759-201ENSMUST00000103254 98 ntBASIC-0.76□□□□□ -2.53
Trem3Q9JKE1 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.76□□□□□ -2.53
Trem3Q9JKE1 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.76□□□□□ -2.53
Trem3Q9JKE1 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.76□□□□□ -2.53
Trem3Q9JKE1 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.76□□□□□ -2.53
Trem3Q9JKE1 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.76□□□□□ -2.53
Trem3Q9JKE1 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.76□□□□□ -2.53
Trem3Q9JKE1 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Gm13720-201ENSMUST00000120741 196 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Gm22199-201ENSMUST00000122660 126 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.77□□□□□ -2.53
Trem3Q9JKE1 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Gm24810-201ENSMUST00000175317 70 ntBASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.78□□□□□ -2.53
Trem3Q9JKE1 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
Trem3Q9JKE1 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.79□□□□□ -2.54
Trem3Q9JKE1 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.79□□□□□ -2.54
Trem3Q9JKE1 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.79□□□□□ -2.54
Trem3Q9JKE1 Gm43238-201ENSMUST00000196463 359 ntBASIC-0.79□□□□□ -2.54
Trem3Q9JKE1 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
Trem3Q9JKE1 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.79□□□□□ -2.54
Trem3Q9JKE1 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
Trem3Q9JKE1 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC-0.8□□□□□ -2.54
Trem3Q9JKE1 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.81□□□□□ -2.54
Trem3Q9JKE1 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.81□□□□□ -2.54
Trem3Q9JKE1 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.81□□□□□ -2.54
Trem3Q9JKE1 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.81□□□□□ -2.54
Trem3Q9JKE1 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.81□□□□□ -2.54
Trem3Q9JKE1 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.81□□□□□ -2.54
Trem3Q9JKE1 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.82□□□□□ -2.54
Trem3Q9JKE1 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.83□□□□□ -2.54
Trem3Q9JKE1 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.83□□□□□ -2.54
Trem3Q9JKE1 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.83□□□□□ -2.54
Trem3Q9JKE1 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.83□□□□□ -2.54
Trem3Q9JKE1 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.83□□□□□ -2.54
Trem3Q9JKE1 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.83□□□□□ -2.54
Trem3Q9JKE1 Gm26056-201ENSMUST00000083043 104 ntBASIC-0.83□□□□□ -2.54
Trem3Q9JKE1 Gm25007-201ENSMUST00000083808 133 ntBASIC-0.83□□□□□ -2.54
Trem3Q9JKE1 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.84□□□□□ -2.54
Trem3Q9JKE1 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.84□□□□□ -2.54
Trem3Q9JKE1 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.84□□□□□ -2.54
Trem3Q9JKE1 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.85□□□□□ -2.55
Trem3Q9JKE1 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.85□□□□□ -2.55
Trem3Q9JKE1 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.85□□□□□ -2.55
Trem3Q9JKE1 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.85□□□□□ -2.55
Trem3Q9JKE1 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.85□□□□□ -2.55
Trem3Q9JKE1 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.85□□□□□ -2.55
Trem3Q9JKE1 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.86□□□□□ -2.55
Trem3Q9JKE1 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.86□□□□□ -2.55
Trem3Q9JKE1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.86□□□□□ -2.55
Trem3Q9JKE1 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.86□□□□□ -2.55
Trem3Q9JKE1 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.86□□□□□ -2.55
Trem3Q9JKE1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.86□□□□□ -2.55
Trem3Q9JKE1 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.86□□□□□ -2.55
Trem3Q9JKE1 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.86□□□□□ -2.55
Trem3Q9JKE1 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.87□□□□□ -2.55
Trem3Q9JKE1 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.87□□□□□ -2.55
Trem3Q9JKE1 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.87□□□□□ -2.55
Trem3Q9JKE1 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.87□□□□□ -2.55
Trem3Q9JKE1 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 132.8 ms