Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm25077-201ENSMUST00000179157 79 ntBASIC-2.78□□□□□ -2.85
Smco4Q9JIS3 AC122335.1-201ENSMUST00000217587 175 ntBASIC-2.78□□□□□ -2.85
Smco4Q9JIS3 CT009550.5-201ENSMUST00000226286 382 ntBASIC-2.78□□□□□ -2.85
Smco4Q9JIS3 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-2.78□□□□□ -2.85
Smco4Q9JIS3 Gm23516-201ENSMUST00000093728 107 ntBASIC-2.78□□□□□ -2.85
Smco4Q9JIS3 Mir216b-201ENSMUST00000102363 86 ntBASIC-2.79□□□□□ -2.86
Smco4Q9JIS3 Gm25784-201ENSMUST00000122524 81 ntBASIC-2.79□□□□□ -2.86
Smco4Q9JIS3 Gm22732-201ENSMUST00000158093 121 ntBASIC-2.79□□□□□ -2.86
Smco4Q9JIS3 Gm23308-201ENSMUST00000179475 107 ntBASIC-2.79□□□□□ -2.86
Smco4Q9JIS3 Mir7086-201ENSMUST00000183683 65 ntBASIC-2.79□□□□□ -2.86
Smco4Q9JIS3 Snord57-201ENSMUST00000083338 72 ntBASIC-2.79□□□□□ -2.86
Smco4Q9JIS3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-2.79□□□□□ -2.86
Smco4Q9JIS3 Mir297b-201ENSMUST00000102268 109 ntBASIC-2.8□□□□□ -2.86
Smco4Q9JIS3 Gm24377-201ENSMUST00000104398 131 ntBASIC-2.8□□□□□ -2.86
Smco4Q9JIS3 Gm27540-201ENSMUST00000184950 187 ntBASIC-2.8□□□□□ -2.86
Smco4Q9JIS3 Gm37438-201ENSMUST00000192813 393 ntBASIC-2.8□□□□□ -2.86
Smco4Q9JIS3 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-2.8□□□□□ -2.86
Smco4Q9JIS3 Gm23892-201ENSMUST00000158105 130 ntBASIC-2.81□□□□□ -2.86
Smco4Q9JIS3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-2.81□□□□□ -2.86
Smco4Q9JIS3 mt-Tw-201ENSMUST00000082397 67 ntBASIC-2.81□□□□□ -2.86
Smco4Q9JIS3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-2.82□□□□□ -2.86
Smco4Q9JIS3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC-2.82□□□□□ -2.86
Smco4Q9JIS3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-2.82□□□□□ -2.86
Smco4Q9JIS3 Gm22248-201ENSMUST00000082482 150 ntBASIC-2.82□□□□□ -2.86
Smco4Q9JIS3 Mir350-201ENSMUST00000083639 99 ntBASIC-2.82□□□□□ -2.86
Smco4Q9JIS3 Gm24073-201ENSMUST00000158177 106 ntBASIC-2.83□□□□□ -2.86
Smco4Q9JIS3 Mir1966-201ENSMUST00000158807 108 ntBASIC-2.83□□□□□ -2.86
Smco4Q9JIS3 Gm29513-201ENSMUST00000185741 202 ntBASIC-2.83□□□□□ -2.86
Smco4Q9JIS3 Gm23058-201ENSMUST00000093703 107 ntBASIC-2.83□□□□□ -2.86
Smco4Q9JIS3 Gm15002-201ENSMUST00000118406 452 ntBASIC-2.84□□□□□ -2.86
Smco4Q9JIS3 Gm26202-201ENSMUST00000082910 65 ntBASIC-2.84□□□□□ -2.86
Smco4Q9JIS3 Gm24649-201ENSMUST00000157106 134 ntBASIC-2.85□□□□□ -2.87
Smco4Q9JIS3 Gm23186-201ENSMUST00000180078 107 ntBASIC-2.85□□□□□ -2.87
Smco4Q9JIS3 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-2.85□□□□□ -2.87
Smco4Q9JIS3 Gm25622-201ENSMUST00000157217 104 ntBASIC-2.86□□□□□ -2.87
Smco4Q9JIS3 Gm25993-201ENSMUST00000175391 80 ntBASIC-2.86□□□□□ -2.87
Smco4Q9JIS3 Gm18291-201ENSMUST00000190791 301 ntBASIC-2.86□□□□□ -2.87
Smco4Q9JIS3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-2.86□□□□□ -2.87
Smco4Q9JIS3 Gm22229-201ENSMUST00000082987 108 ntBASIC-2.86□□□□□ -2.87
Smco4Q9JIS3 Mir701-201ENSMUST00000102208 109 ntBASIC-2.87□□□□□ -2.87
Smco4Q9JIS3 Gm24250-201ENSMUST00000157320 135 ntBASIC-2.87□□□□□ -2.87
Smco4Q9JIS3 Gm22553-201ENSMUST00000157797 295 ntBASIC-2.87□□□□□ -2.87
Smco4Q9JIS3 Gm25538-201ENSMUST00000101943 107 ntBASIC-2.88□□□□□ -2.87
Smco4Q9JIS3 Gm23166-201ENSMUST00000157164 101 ntBASIC-2.88□□□□□ -2.87
Smco4Q9JIS3 Gm25366-201ENSMUST00000158845 124 ntBASIC-2.88□□□□□ -2.87
Smco4Q9JIS3 Gm22455-201ENSMUST00000082580 71 ntBASIC-2.88□□□□□ -2.87
Smco4Q9JIS3 Gm22145-201ENSMUST00000157396 148 ntBASIC-2.89□□□□□ -2.87
Smco4Q9JIS3 Gm25451-201ENSMUST00000177832 121 ntBASIC-2.89□□□□□ -2.87
Smco4Q9JIS3 Gm22454-201ENSMUST00000082583 107 ntBASIC-2.89□□□□□ -2.87
Smco4Q9JIS3 Mir543-201ENSMUST00000102286 76 ntBASIC-2.9□□□□□ -2.87
Smco4Q9JIS3 Gm15069-201ENSMUST00000117792 192 ntBASIC-2.9□□□□□ -2.87
Smco4Q9JIS3 Gm15068-201ENSMUST00000119796 192 ntBASIC-2.9□□□□□ -2.87
Smco4Q9JIS3 Gm25225-201ENSMUST00000158197 102 ntBASIC-2.9□□□□□ -2.87
Smco4Q9JIS3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC-2.9□□□□□ -2.87
Smco4Q9JIS3 Gm44909-201ENSMUST00000208756 165 ntBASIC-2.9□□□□□ -2.87
Smco4Q9JIS3 Gm13922-201ENSMUST00000119505 156 ntBASIC-2.91□□□□□ -2.88
Smco4Q9JIS3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-2.91□□□□□ -2.88
Smco4Q9JIS3 Gm27935-201ENSMUST00000183894 79 ntBASIC-2.91□□□□□ -2.88
Smco4Q9JIS3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC-2.91□□□□□ -2.88
Smco4Q9JIS3 Gm25429-201ENSMUST00000157607 132 ntBASIC-2.92□□□□□ -2.88
Smco4Q9JIS3 Gm24006-201ENSMUST00000158462 132 ntBASIC-2.92□□□□□ -2.88
Smco4Q9JIS3 Gm22430-201ENSMUST00000158546 107 ntBASIC-2.92□□□□□ -2.88
Smco4Q9JIS3 Gm25473-201ENSMUST00000180191 107 ntBASIC-2.92□□□□□ -2.88
Smco4Q9JIS3 Gm25801-201ENSMUST00000082638 106 ntBASIC-2.93□□□□□ -2.88
Smco4Q9JIS3 Gm26500-201ENSMUST00000101867 106 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Mir20b-201ENSMUST00000102087 80 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Gm24047-201ENSMUST00000102405 104 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Gm22321-201ENSMUST00000157152 104 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Gm22788-201ENSMUST00000157876 61 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Gm24818-201ENSMUST00000175093 161 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Gm22298-201ENSMUST00000082662 133 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Gm25337-201ENSMUST00000083723 104 ntBASIC-2.94□□□□□ -2.88
Smco4Q9JIS3 Gm11407-201ENSMUST00000120362 1058 ntBASIC-2.95□□□□□ -2.88
Smco4Q9JIS3 Gm45403-201ENSMUST00000209453 276 ntBASIC-2.95□□□□□ -2.88
Smco4Q9JIS3 CT025526.1-201ENSMUST00000217327 267 ntBASIC-2.95□□□□□ -2.88
Smco4Q9JIS3 Gm23654-201ENSMUST00000116758 126 ntBASIC-2.96□□□□□ -2.88
Smco4Q9JIS3 Mir302d-201ENSMUST00000083513 66 ntBASIC-2.96□□□□□ -2.88
Smco4Q9JIS3 Gm25559-201ENSMUST00000157182 74 ntBASIC-2.97□□□□□ -2.88
Smco4Q9JIS3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-2.97□□□□□ -2.88
Smco4Q9JIS3 Gm27297-201ENSMUST00000183395 105 ntBASIC-2.97□□□□□ -2.88
Smco4Q9JIS3 Gm37796-201ENSMUST00000195327 134 ntBASIC-2.97□□□□□ -2.88
Smco4Q9JIS3 AC116589.1-201ENSMUST00000220634 327 ntBASIC-2.97□□□□□ -2.88
Smco4Q9JIS3 AC164117.2-201ENSMUST00000222090 327 ntBASIC-2.97□□□□□ -2.88
Smco4Q9JIS3 AC098718.2-201ENSMUST00000226822 285 ntBASIC-2.97□□□□□ -2.88
Smco4Q9JIS3 Mir450-2-201ENSMUST00000102444 69 ntBASIC-2.98□□□□□ -2.89
Smco4Q9JIS3 Gm26104-201ENSMUST00000157250 108 ntBASIC-2.98□□□□□ -2.89
Smco4Q9JIS3 Gm24971-201ENSMUST00000175581 110 ntBASIC-2.98□□□□□ -2.89
Smco4Q9JIS3 Gm23726-201ENSMUST00000178937 67 ntBASIC-2.98□□□□□ -2.89
Smco4Q9JIS3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-2.98□□□□□ -2.89
Smco4Q9JIS3 Gm25588-201ENSMUST00000082501 140 ntBASIC-2.98□□□□□ -2.89
Smco4Q9JIS3 Gm25055-201ENSMUST00000157369 76 ntBASIC-2.99□□□□□ -2.89
Smco4Q9JIS3 Gm42805-201ENSMUST00000196158 276 ntBASIC-2.99□□□□□ -2.89
Smco4Q9JIS3 Gm42795-201ENSMUST00000198847 76 ntBASIC-2.99□□□□□ -2.89
Smco4Q9JIS3 Gm25078-201ENSMUST00000082530 107 ntBASIC-2.99□□□□□ -2.89
Smco4Q9JIS3 Gm24640-201ENSMUST00000116949 126 ntBASIC-3□□□□□ -2.89
Smco4Q9JIS3 Gm22626-201ENSMUST00000116990 126 ntBASIC-3□□□□□ -2.89
Smco4Q9JIS3 Gm24725-201ENSMUST00000158229 125 ntBASIC-3□□□□□ -2.89
Smco4Q9JIS3 Gm25296-201ENSMUST00000082566 67 ntBASIC-3□□□□□ -2.89
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms