Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm23375-201ENSMUST00000175407 83 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm22129-201ENSMUST00000179034 107 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm23410-201ENSMUST00000179967 107 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm22756-201ENSMUST00000180118 107 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm22505-201ENSMUST00000082956 108 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm22363-201ENSMUST00000083100 108 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm23814-201ENSMUST00000083230 102 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm23095-201ENSMUST00000083446 107 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Mir201-201ENSMUST00000083470 66 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Mir200b-201ENSMUST00000083615 70 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm25274-201ENSMUST00000104296 135 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Gm24232-201ENSMUST00000104314 132 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Gm22790-201ENSMUST00000157229 129 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Gm24808-201ENSMUST00000157993 118 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Gm23114-201ENSMUST00000158478 117 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Gm22944-201ENSMUST00000158662 133 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Gm43381-201ENSMUST00000198553 165 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Gm23245-201ENSMUST00000083370 135 ntBASIC1.27□□□□□ -2.21
Trim54Q9ERP3 Gm22233-201ENSMUST00000157464 114 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm25882-201ENSMUST00000157784 85 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm25868-201ENSMUST00000158253 114 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm24942-201ENSMUST00000158328 114 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm24131-201ENSMUST00000158539 107 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm25241-201ENSMUST00000174909 84 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm26217-201ENSMUST00000175212 84 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm27668-201ENSMUST00000184188 120 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Mir21b-201ENSMUST00000184317 108 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm42623-201ENSMUST00000197225 379 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm44976-201ENSMUST00000205543 261 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.26□□□□□ -2.21
Trim54Q9ERP3 Gm23990-201ENSMUST00000117031 117 ntBASIC1.25□□□□□ -2.21
Trim54Q9ERP3 Gm27656-201ENSMUST00000185055 80 ntBASIC1.25□□□□□ -2.21
Trim54Q9ERP3 Gm44396-201ENSMUST00000199843 114 ntBASIC1.25□□□□□ -2.21
Trim54Q9ERP3 Gm8219-201ENSMUST00000218309 242 ntBASIC1.25□□□□□ -2.21
Trim54Q9ERP3 Gm26076-201ENSMUST00000104065 105 ntBASIC1.24□□□□□ -2.21
Trim54Q9ERP3 Gm25715-201ENSMUST00000158627 125 ntBASIC1.24□□□□□ -2.21
Trim54Q9ERP3 Gm24106-201ENSMUST00000175498 127 ntBASIC1.24□□□□□ -2.21
Trim54Q9ERP3 Gm25128-201ENSMUST00000083339 76 ntBASIC1.24□□□□□ -2.21
Trim54Q9ERP3 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.24□□□□□ -2.21
Trim54Q9ERP3 Mir489-201ENSMUST00000093599 107 ntBASIC1.24□□□□□ -2.21
Trim54Q9ERP3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Trim54Q9ERP3 Gm25170-201ENSMUST00000104191 129 ntBASIC1.23□□□□□ -2.21
Trim54Q9ERP3 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.23□□□□□ -2.21
Trim54Q9ERP3 Mir1966-201ENSMUST00000158807 108 ntBASIC1.23□□□□□ -2.21
Trim54Q9ERP3 Gm44322-201ENSMUST00000196830 115 ntBASIC1.23□□□□□ -2.21
Trim54Q9ERP3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.23□□□□□ -2.21
Trim54Q9ERP3 Gm22980-201ENSMUST00000082608 70 ntBASIC1.23□□□□□ -2.21
Trim54Q9ERP3 Gm22576-201ENSMUST00000083733 104 ntBASIC1.23□□□□□ -2.21
Trim54Q9ERP3 Gm26420-201ENSMUST00000104273 103 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 Gm22815-201ENSMUST00000157451 62 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 Gm25716-201ENSMUST00000158628 104 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 Gm23340-201ENSMUST00000158955 123 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 Mir1954-201ENSMUST00000175595 86 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 Mir7663-201ENSMUST00000183950 61 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 Gm44462-201ENSMUST00000199696 129 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 Mir324-201ENSMUST00000083600 89 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.22□□□□□ -2.21
Trim54Q9ERP3 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Mir547-201ENSMUST00000102051 78 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm24250-201ENSMUST00000157320 135 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm22967-201ENSMUST00000157956 239 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm22485-201ENSMUST00000157990 109 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm16307-201ENSMUST00000161269 210 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm23770-201ENSMUST00000178009 108 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm22832-201ENSMUST00000178022 108 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm23863-201ENSMUST00000178265 108 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm24828-201ENSMUST00000178507 108 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm23052-201ENSMUST00000178633 108 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm25729-201ENSMUST00000179050 108 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm25359-201ENSMUST00000179315 108 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm22624-201ENSMUST00000179913 108 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Gm26123-201ENSMUST00000083363 135 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Mir448-201ENSMUST00000083516 112 ntBASIC1.21□□□□□ -2.22
Trim54Q9ERP3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Gm22139-201ENSMUST00000158747 105 ntBASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Gm27928-201ENSMUST00000183747 256 ntBASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Gm18665-201ENSMUST00000189783 270 ntBASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trim54Q9ERP3 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Gm22809-201ENSMUST00000082743 156 ntBASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Gm25851-201ENSMUST00000082794 107 ntBASIC1.2□□□□□ -2.22
Trim54Q9ERP3 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Gm22105-201ENSMUST00000116734 116 ntBASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Gm23988-201ENSMUST00000117034 122 ntBASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Gm22425-201ENSMUST00000158532 138 ntBASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Gm22074-201ENSMUST00000158595 113 ntBASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Mir1961-201ENSMUST00000158643 112 ntBASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Gm24221-201ENSMUST00000158833 313 ntBASIC1.19□□□□□ -2.22
Trim54Q9ERP3 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Trim54Q9ERP3 Gm24271-201ENSMUST00000102327 111 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 205.3 ms